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Cow genome map

           
Conread name:
           
rpigcf0_017685.y1
        

               
Conread position:
               
14-461
               

               
Cow position:
               
chr24:3494106-3493640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 269
               

               
Conread position:
               
20-462
               

               
Cow position:
               
chr24:36403940-36404401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
166, 104
               

               
Conread position:
               
31-347
               

               
Cow position:
               
chr24:28234245-28233914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
32-191
               

               
Cow position:
               
chr24:28500017-28500173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
115, 63
               

               
Conread position:
               
36-231
               

               
Cow position:
               
chr24:28024467-28024270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
38, 74
               

               
Conread position:
               
39-256
               

               
Cow position:
               
chr24:2730429-2730658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
39-305
               

               
Cow position:
               
chr24:20364221-20364503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
99, 12
               

               
Conread position:
               
39-328
               

               
Cow position:
               
chr24:37974786-37975097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
9, 29
               

               
Conread position:
               
39-353
               

               
Cow position:
               
chr24:34390467-34390156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
88, 28
               

               
Conread position:
               
40-430
               

               
Cow position:
               
chr24:29539734-29540133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
40-456
               

               
Cow position:
               
chr24:29595605-29596064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 8
               

               
Conread position:
               
45-308
               

               
Cow position:
               
chr24:20807716-20807439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 89
               

               
Conread position:
               
45-442
               

               
Cow position:
               
chr24:40592906-40592486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
21, 246
               

               
Conread position:
               
46-191
               

               
Cow position:
               
chr24:13114933-13114792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 64
               

               
Conread position:
               
46-191
               

               
Cow position:
               
chr24:21834773-21834922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
87, 111
               

               
Conread position:
               
46-463
               

               
Cow position:
               
chr24:7917189-7917624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 100
               

               
Conread position:
               
46-463
               

               
Cow position:
               
chr24:44040826-44041264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 7
               

               
Conread position:
               
47-184
               

               
Cow position:
               
chr24:31160854-31160994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
81, 9
               

               
Conread position:
               
47-199
               

               
Cow position:
               
chr24:29524202-29524357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
92, 5
               

               
Conread position:
               
47-230
               

               
Cow position:
               
chr24:30945399-30945591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
20, 85
               

               
Conread position:
               
48-446
               

               
Cow position:
               
chr24:32758592-32759002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
13, 99
               

               
Conread position:
               
49-194
               

               
Cow position:
               
chr24:27791557-27791702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
49-291
               

               
Cow position:
               
chr24:14551647-14551389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
17, 32
               

               
Conread position:
               
49-302
               

               
Cow position:
               
chr24:25970897-25971142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
142, 156
               

               
Conread position:
               
49-370
               

               
Cow position:
               
chr24:12200221-12200570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 47
               

               
Conread position:
               
49-391
               

               
Cow position:
               
chr24:19000230-18999866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
113, 97
               

               
Conread position:
               
49-400
               

               
Cow position:
               
chr24:21606489-21606851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 230
               

               
Conread position:
               
49-468
               

               
Cow position:
               
chr24:17308954-17309363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
89, 162
               

               
Conread position:
               
49-577
               

               
Cow position:
               
chr24:17955279-17955833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
421
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 7
               

               
Conread position:
               
50-191
               

               
Cow position:
               
chr24:13610487-13610345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
109, 87
               

               
Conread position:
               
51-169
               

               
Cow position:
               
chr24:21895446-21895330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
51-192
               

               
Cow position:
               
chr24:12121084-12120932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
51-299
               

               
Cow position:
               
chr24:23000186-22999924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
101, 64
               

               
Conread position:
               
51-400
               

               
Cow position:
               
chr24:25756113-25756476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 268
               

               
Conread position:
               
51-409
               

               
Cow position:
               
chr24:39143797-39143409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
76, 171
               

               
Conread position:
               
51-463
               

               
Cow position:
               
chr24:33621293-33621741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
76, 317
               

               
Conread position:
               
51-463
               

               
Cow position:
               
chr24:38815159-38814716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
76, 262
               

               
Conread position:
               
51-467
               

               
Cow position:
               
chr24:37246056-37246477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
76, 33
               

               
Conread position:
               
53-271
               

               
Cow position:
               
chr24:11034441-11034217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
139, 84
               

               
Conread position:
               
53-425
               

               
Cow position:
               
chr24:39833356-39833733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
53-458
               

               
Cow position:
               
chr24:5142121-5141690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 39
               

               
Conread position:
               
53-460
               

               
Cow position:
               
chr24:28303180-28303601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
54-366
               

               
Cow position:
               
chr24:17751926-17752266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
79, 117
               

               
Conread position:
               
54-460
               

               
Cow position:
               
chr24:30860797-30860384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
73, 44
               

               
Conread position:
               
55-220
               

               
Cow position:
               
chr24:6677816-6677648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
93, 73
               

               
Conread position:
               
55-281
               

               
Cow position:
               
chr24:27202267-27202020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
23, 34
               

               
Conread position:
               
55-359
               

               
Cow position:
               
chr24:880802-880482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
77, 48
               

               
Conread position:
               
55-405
               

               
Cow position:
               
chr24:31258178-31258530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 33
               

               
Conread position:
               
55-462
               

               
Cow position:
               
chr24:27725827-27726258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr24:11840365-11839923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 46
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr24:30313848-30314291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 125
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr24:33098291-33098743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 387
               

               
Conread position:
               
55-472
               

               
Cow position:
               
chr24:32054825-32054408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 38
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr24:16303504-16303640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 36
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr24:24136228-24136366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr24:31383288-31383152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
85, 39
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr24:36554521-36554661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
85, 111
               

               
Conread position:
               
56-209
               

               
Cow position:
               
chr24:11035332-11035493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
56-220
               

               
Cow position:
               
chr24:3404795-3404627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
80, 152
               

               
Conread position:
               
56-222
               

               
Cow position:
               
chr24:5152706-5152523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
56-290
               

               
Cow position:
               
chr24:13586811-13587066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
56-290
               

               
Cow position:
               
chr24:18811012-18810765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
56-316
               

               
Cow position:
               
chr24:230460-230172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 234
               

               
Conread position:
               
56-340
               

               
Cow position:
               
chr24:27713230-27713532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 281
               

               
Conread position:
               
56-347
               

               
Cow position:
               
chr24:14550970-14550663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 58
               

               
Conread position:
               
56-364
               

               
Cow position:
               
chr24:37395027-37395359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
66, 230
               

               
Conread position:
               
56-376
               

               
Cow position:
               
chr24:18356877-18357216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
56-377
               

               
Cow position:
               
chr24:37038072-37037735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
16, 82
               

               
Conread position:
               
56-393
               

               
Cow position:
               
chr24:29587180-29586810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
103, 55
               

               
Conread position:
               
56-409
               

               
Cow position:
               
chr24:19187112-19186765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 184
               

               
Conread position:
               
56-432
               

               
Cow position:
               
chr24:21519610-21519215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
69, 231
               

               
Conread position:
               
56-444
               

               
Cow position:
               
chr24:18344246-18343812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
79, 118
               

               
Conread position:
               
56-455
               

               
Cow position:
               
chr24:10499398-10498963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
78, 296
               

               
Conread position:
               
56-457
               

               
Cow position:
               
chr24:18474549-18474997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
82, 166
               

               
Conread position:
               
56-457
               

               
Cow position:
               
chr24:41986154-41985727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
89, 32
               

               
Conread position:
               
56-460
               

               
Cow position:
               
chr24:32822615-32823034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
33, 76
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr24:39742983-39742571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
148, 68
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr24:42103540-42103121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 13
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:1269957-1269549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 164
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:2970446-2970862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:3165999-3165566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:18484811-18485255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 121
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:27607931-27608353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:27844353-27844775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 244
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:28599694-28600109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
137, 39
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:28690866-28690445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
33, 166
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:43635595-43635179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 40
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr24:44703145-44702722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 189
               

               
Conread position:
               
56-484
               

               
Cow position:
               
chr24:27040229-27039763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 15
               

               
Conread position:
               
56-577
               

               
Cow position:
               
chr24:40301340-40300785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
72, 125
               

               
Conread position:
               
56-581
               

               
Cow position:
               
chr24:30483764-30484336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 373
               

               
Conread position:
               
57-187
               

               
Cow position:
               
chr24:30325603-30325740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
57-188
               

               
Cow position:
               
chr24:6488383-6488248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 23
               

               
Conread position:
               
57-192
               

               
Cow position:
               
chr24:27940449-27940586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
57-220
               

               
Cow position:
               
chr24:28510970-28510799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
57-222
               

               
Cow position:
               
chr24:32890867-32891044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
20, 29
               

               
Conread position:
               
57-322
               

               
Cow position:
               
chr24:43011186-43011445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 89
               

               
Conread position:
               
57-370
               

               
Cow position:
               
chr24:7777455-7777773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 34
               

               
Conread position:
               
57-396
               

               
Cow position:
               
chr24:15347779-15347409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 119
               

               
Conread position:
               
57-455
               

               
Cow position:
               
chr24:42825337-42825745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr24:6507607-6508019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
13, 72
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr24:17104393-17104821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr24:30544711-30545111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 87
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr24:39350065-39350462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
57-468
               

               
Cow position:
               
chr24:2402198-2402637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
49, 71
               

               
Conread position:
               
57-577
               

               
Cow position:
               
chr24:34396012-34396538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 11
               

               
Conread position:
               
58-190
               

               
Cow position:
               
chr24:41925994-41925860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
58-191
               

               
Cow position:
               
chr24:28255886-28256022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 9
               

               
Conread position:
               
58-272
               

               
Cow position:
               
chr24:23666948-23667181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
58-308
               

               
Cow position:
               
chr24:28600260-28600535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
58-331
               

               
Cow position:
               
chr24:43832700-43832404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
91, 202
               

               
Conread position:
               
58-354
               

               
Cow position:
               
chr24:390278-389960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 256
               

               
Conread position:
               
58-400
               

               
Cow position:
               
chr24:42876724-42877060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
58-457
               

               
Cow position:
               
chr24:19658712-19658299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
74, 39
               

               
Conread position:
               
58-457
               

               
Cow position:
               
chr24:24755607-24755200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 35
               

               
Conread position:
               
58-457
               

               
Cow position:
               
chr24:28553394-28553794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 37
               

               
Conread position:
               
58-462
               

               
Cow position:
               
chr24:17311051-17311463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr24:15508391-15508790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 87
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr24:25112375-25111947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
11, 86
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr24:34742927-34742494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 30
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr24:27719353-27719490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr24:43349470-43349602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr24:43445834-43445977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
59-212
               

               
Cow position:
               
chr24:26588395-26588230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
59-222
               

               
Cow position:
               
chr24:22420139-22419960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
79, 25
               

               
Conread position:
               
59-222
               

               
Cow position:
               
chr24:36286745-36286569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
59-222
               

               
Cow position:
               
chr24:37252334-37252157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
59-299
               

               
Cow position:
               
chr24:2992703-2992965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
74, 113
               

               
Conread position:
               
59-301
               

               
Cow position:
               
chr24:12241898-12241642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 195
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr24:37823700-37823432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
59-367
               

               
Cow position:
               
chr24:16055354-16055650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
145, 8
               

               
Conread position:
               
59-393
               

               
Cow position:
               
chr24:38006535-38006890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 225
               

               
Conread position:
               
59-409
               

               
Cow position:
               
chr24:16089406-16089037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
80, 36
               

               
Conread position:
               
59-416
               

               
Cow position:
               
chr24:352427-352813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 234
               

               
Conread position:
               
59-444
               

               
Cow position:
               
chr24:25194443-25194030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 206
               

               
Conread position:
               
59-461
               

               
Cow position:
               
chr24:25321162-25320736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
69, 211
               

               
Conread position:
               
59-461
               

               
Cow position:
               
chr24:29389394-29388993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 72
               

               
Conread position:
               
59-462
               

               
Cow position:
               
chr24:27906615-27906180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 113
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr24:28496406-28496844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
70, 18
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr24:28722054-28721633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 151
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr24:38347853-38347425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 217
               

               
Conread position:
               
59-465
               

               
Cow position:
               
chr24:6103000-6102577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
59-471
               

               
Cow position:
               
chr24:27810326-27809919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
59-577
               

               
Cow position:
               
chr24:27149559-27149009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
415
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 36
               

               
Conread position:
               
60-190
               

               
Cow position:
               
chr24:7757945-7757810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
60-233
               

               
Cow position:
               
chr24:18750886-18750696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
60-264
               

               
Cow position:
               
chr24:34896525-34896753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
60-315
               

               
Cow position:
               
chr24:10031750-10031484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
117, 55
               

               
Conread position:
               
60-336
               

               
Cow position:
               
chr24:41406070-41405773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
60-345
               

               
Cow position:
               
chr24:2359009-2359309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
79, 190
               

               
Conread position:
               
60-397
               

               
Cow position:
               
chr24:19801015-19800661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 220
               

               
Conread position:
               
60-419
               

               
Cow position:
               
chr24:30897386-30897743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
163, 63
               

               
Conread position:
               
60-429
               

               
Cow position:
               
chr24:16510147-16509751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 24
               

               
Conread position:
               
60-444
               

               
Cow position:
               
chr24:28700219-28699821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
60-457
               

               
Cow position:
               
chr24:34368850-34369257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
60-460
               

               
Cow position:
               
chr24:7914185-7913746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
67, 226
               

               
Conread position:
               
60-462
               

               
Cow position:
               
chr24:15861415-15861855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr24:15057560-15057147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
60-468
               

               
Cow position:
               
chr24:41980484-41980925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
67, 244
               

               
Conread position:
               
60-470
               

               
Cow position:
               
chr24:30229650-30229206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 288
               

               
Conread position:
               
60-549
               

               
Cow position:
               
chr24:37650851-37650309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
68, 150
               

               
Conread position:
               
62-463
               

               
Cow position:
               
chr24:19465735-19466188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
62-481
               

               
Cow position:
               
chr24:19535078-19535521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 224
               

               
Conread position:
               
63-191
               

               
Cow position:
               
chr24:25122509-25122378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
76, 6
               

               
Conread position:
               
63-377
               

               
Cow position:
               
chr24:37945473-37945798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
130, 79
               

               
Conread position:
               
63-396
               

               
Cow position:
               
chr24:17832656-17833000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 25
               

               
Conread position:
               
63-466
               

               
Cow position:
               
chr24:27748793-27748391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
63-474
               

               
Cow position:
               
chr24:39227146-39226733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
166, 27
               

               
Conread position:
               
63-580
               

               
Cow position:
               
chr24:18374937-18374390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 178
               

               
Conread position:
               
64-242
               

               
Cow position:
               
chr24:28330821-28331004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
64-307
               

               
Cow position:
               
chr24:19637759-19637489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
10, 227
               

               
Conread position:
               
64-446
               

               
Cow position:
               
chr24:14617811-14617418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
64-457
               

               
Cow position:
               
chr24:40130310-40129873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
64-577
               

               
Cow position:
               
chr24:32124482-32125020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
65-360
               

               
Cow position:
               
chr24:32739092-32739419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
63, 276
               

               
Conread position:
               
65-368
               

               
Cow position:
               
chr24:4725130-4724818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
65-397
               

               
Cow position:
               
chr24:41423766-41423422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
65-400
               

               
Cow position:
               
chr24:24532342-24532007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 191
               

               
Conread position:
               
65-409
               

               
Cow position:
               
chr24:10126050-10125666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
73, 20
               

               
Conread position:
               
65-409
               

               
Cow position:
               
chr24:22079634-22079261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 156
               

               
Conread position:
               
65-461
               

               
Cow position:
               
chr24:23694740-23695150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 30
               

               
Conread position:
               
65-463
               

               
Cow position:
               
chr24:39483634-39483218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 74
               

               
Conread position:
               
66-376
               

               
Cow position:
               
chr24:35576366-35576698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 36
               

               
Conread position:
               
66-463
               

               
Cow position:
               
chr24:43371413-43370993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
63, 302
               

               
Conread position:
               
67-169
               

               
Cow position:
               
chr24:28566170-28566275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
88
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
67-201
               

               
Cow position:
               
chr24:17938850-17938718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
67-215
               

               
Cow position:
               
chr24:2223052-2223199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
67-215
               

               
Cow position:
               
chr24:38718880-38719023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
67-218
               

               
Cow position:
               
chr24:33244555-33244399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 71
               

               
Conread position:
               
67-231
               

               
Cow position:
               
chr24:27203622-27203451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
69, 96
               

               
Conread position:
               
67-301
               

               
Cow position:
               
chr24:5360880-5360643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
64, 154
               

               
Conread position:
               
67-302
               

               
Cow position:
               
chr24:50282-50516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
68, 131
               

               
Conread position:
               
67-338
               

               
Cow position:
               
chr24:39523281-39523573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
67-398
               

               
Cow position:
               
chr24:27219919-27220279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
67-456
               

               
Cow position:
               
chr24:16995047-16994645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 217
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr24:11887322-11886902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 28
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr24:17860093-17860506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 277
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr24:18734211-18734610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 40
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr24:24490857-24491266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 7
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr24:27874742-27874349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 44
               

               
Conread position:
               
67-469
               

               
Cow position:
               
chr24:24311652-24311239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
67-471
               

               
Cow position:
               
chr24:31378898-31378492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
57, 28
               

               
Conread position:
               
67-565
               

               
Cow position:
               
chr24:33372715-33372176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
67-577
               

               
Cow position:
               
chr24:15246489-15247023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
126, 33
               

               
Conread position:
               
67-581
               

               
Cow position:
               
chr24:30236041-30235476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 284
               

               
Conread position:
               
68-463
               

               
Cow position:
               
chr24:28349732-28349330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
140, 55
               

               
Conread position:
               
69-201
               

               
Cow position:
               
chr24:24540325-24540465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
69-409
               

               
Cow position:
               
chr24:6131720-6132072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 23
               

               
Conread position:
               
69-461
               

               
Cow position:
               
chr24:212137-211728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 160
               

               
Conread position:
               
69-463
               

               
Cow position:
               
chr24:28063117-28062690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 121
               

               
Conread position:
               
69-463
               

               
Cow position:
               
chr24:35074249-35073837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 186
               

               
Conread position:
               
69-577
               

               
Cow position:
               
chr24:35675698-35675161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 98
               

               
Conread position:
               
70-222
               

               
Cow position:
               
chr24:11036671-11036835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
72-339
               

               
Cow position:
               
chr24:29561415-29561701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
64, 30
               

               
Conread position:
               
72-460
               

               
Cow position:
               
chr24:25425190-25424811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
20, 5
               

               
Conread position:
               
72-461
               

               
Cow position:
               
chr24:27096855-27096432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 23
               

               
Conread position:
               
72-462
               

               
Cow position:
               
chr24:33944570-33944153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 205
               

               
Conread position:
               
72-463
               

               
Cow position:
               
chr24:17407555-17407134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 277
               

               
Conread position:
               
72-463
               

               
Cow position:
               
chr24:44987208-44987627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 347
               

               
Conread position:
               
73-234
               

               
Cow position:
               
chr24:21102562-21102396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
73-279
               

               
Cow position:
               
chr24:18324117-18324327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 89
               

               
Conread position:
               
73-366
               

               
Cow position:
               
chr24:38841270-38841557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
119, 65
               

               
Conread position:
               
73-441
               

               
Cow position:
               
chr24:31036501-31036123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
89, 11
               

               
Conread position:
               
73-458
               

               
Cow position:
               
chr24:23556174-23556581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
68, 211
               

               
Conread position:
               
73-461
               

               
Cow position:
               
chr24:17294032-17294440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 151
               

               
Conread position:
               
73-463
               

               
Cow position:
               
chr24:18741402-18741826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 221
               

               
Conread position:
               
74-345
               

               
Cow position:
               
chr24:35632143-35631854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
75-189
               

               
Cow position:
               
chr24:3532876-3532989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
65, 57
               

               
Conread position:
               
75-191
               

               
Cow position:
               
chr24:25231163-25231281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
75-192
               

               
Cow position:
               
chr24:41916418-41916295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
75-346
               

               
Cow position:
               
chr24:398941-399209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 127
               

               
Conread position:
               
75-463
               

               
Cow position:
               
chr24:31816736-31816330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
76-471
               

               
Cow position:
               
chr24:41756010-41755600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
116, 53
               

               
Conread position:
               
77-463
               

               
Cow position:
               
chr24:20874839-20874421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 226
               

               
Conread position:
               
77-471
               

               
Cow position:
               
chr24:27267772-27267372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
81-457
               

               
Cow position:
               
chr24:20943315-20942920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 214
               

               
Conread position:
               
87-409
               

               
Cow position:
               
chr24:28990711-28990370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
48, 73
               

               
Conread position:
               
88-423
               

               
Cow position:
               
chr24:16645170-16645537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
43, 91
               

               
Conread position:
               
88-463
               

               
Cow position:
               
chr24:16267995-16268359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
89-463
               

               
Cow position:
               
chr24:29782311-29781906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 104
               

               
Conread position:
               
99-328
               

               
Cow position:
               
chr24:16895010-16895247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
94, 53
               

               
Conread position:
               
99-400
               

               
Cow position:
               
chr24:26554457-26554791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
28, 192
               

               
Conread position:
               
100-431
               

               
Cow position:
               
chr24:31359454-31359099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
39, 83
               

               
Conread position:
               
100-463
               

               
Cow position:
               
chr24:19769621-19769243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 14
               

               
Conread position:
               
100-463
               

               
Cow position:
               
chr24:25885033-25885413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
93, 29
               

               
Conread position:
               
108-463
               

               
Cow position:
               
chr24:5754956-5754586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
31, 65
               

               
Conread position:
               
118-465
               

               
Cow position:
               
chr24:29063552-29063903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
75, 17
               

               
Conread position:
               
121-340
               

               
Cow position:
               
chr24:19905730-19905945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
95, 137
               

               
Conread position:
               
121-463
               

               
Cow position:
               
chr24:814162-814520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
121-577
               

               
Cow position:
               
chr24:6450597-6450134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
124-463
               

               
Cow position:
               
chr24:25678126-25677779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
5, 11
               

               
Conread position:
               
127-370
               

               
Cow position:
               
chr24:28289154-28289405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
127-375
               

               
Cow position:
               
chr24:5683379-5683116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
127-423
               

               
Cow position:
               
chr24:15373509-15373194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 90
               

               
Conread position:
               
127-426
               

               
Cow position:
               
chr24:33465520-33465819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
127-435
               

               
Cow position:
               
chr24:24457151-24457474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
65, 17
               

               
Conread position:
               
127-437
               

               
Cow position:
               
chr24:28326980-28327312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
62, 203
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr24:14648257-14648590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
12, 140
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr24:18331822-18331481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
12, 160
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr24:18390199-18390543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 102
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr24:32204693-32205049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr24:34533222-34532868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 89
               

               
Conread position:
               
127-467
               

               
Cow position:
               
chr24:35150620-35150270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
12, 149
               

               
Conread position:
               
127-468
               

               
Cow position:
               
chr24:40850253-40849901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 138
               

               
Conread position:
               
127-471
               

               
Cow position:
               
chr24:31159717-31159366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 145
               

               
Conread position:
               
128-406
               

               
Cow position:
               
chr24:34008472-34008774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
128-462
               

               
Cow position:
               
chr24:11119378-11119028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 103
               

               
Conread position:
               
129-320
               

               
Cow position:
               
chr24:21638221-21638030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
75, 64
               

               
Conread position:
               
129-391
               

               
Cow position:
               
chr24:32071059-32070785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
130-340
               

               
Cow position:
               
chr24:27418007-27418226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 15
               

               
Conread position:
               
130-463
               

               
Cow position:
               
chr24:16556557-16556890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 17
               

               
Conread position:
               
130-472
               

               
Cow position:
               
chr24:24250821-24250469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
130-509
               

               
Cow position:
               
chr24:43200179-43200574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
131-458
               

               
Cow position:
               
chr24:27824558-27824214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 7
               

               
Conread position:
               
132-456
               

               
Cow position:
               
chr24:2095786-2096137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
61, 240
               

               
Conread position:
               
132-463
               

               
Cow position:
               
chr24:29673617-29673264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
133-577
               

               
Cow position:
               
chr24:29171057-29170578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 197
               

               
Conread position:
               
135-577
               

               
Cow position:
               
chr24:12851799-12851340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 93
               

               
Conread position:
               
136-463
               

               
Cow position:
               
chr24:28319117-28319455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
53, 171
               

               
Conread position:
               
137-356
               

               
Cow position:
               
chr24:24662040-24662272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 143
               

               
Conread position:
               
137-390
               

               
Cow position:
               
chr24:10300167-10299903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
56, 145
               

               
Conread position:
               
137-457
               

               
Cow position:
               
chr24:33230765-33230415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 128
               

               
Conread position:
               
137-463
               

               
Cow position:
               
chr24:41068351-41068013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
137-472
               

               
Cow position:
               
chr24:18970417-18970755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 144
               

               
Conread position:
               
138-392
               

               
Cow position:
               
chr24:16895348-16895618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
139-455
               

               
Cow position:
               
chr24:2675399-2675082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
139-463
               

               
Cow position:
               
chr24:20225825-20225482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
54, 141
               

               
Conread position:
               
139-463
               

               
Cow position:
               
chr24:27290960-27290621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 181
               

               
Conread position:
               
139-463
               

               
Cow position:
               
chr24:33153865-33153527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
53, 117
               

               
Conread position:
               
140-463
               

               
Cow position:
               
chr24:32369827-32370165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
51, 138
               

               
Conread position:
               
140-468
               

               
Cow position:
               
chr24:31324372-31324021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
53, 38
               

               
Conread position:
               
141-461
               

               
Cow position:
               
chr24:26732536-26732194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
141-462
               

               
Cow position:
               
chr24:43364445-43364109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 174
               

               
Conread position:
               
141-462
               

               
Cow position:
               
chr24:44054081-44054396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
142-461
               

               
Cow position:
               
chr24:29679227-29679564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
50, 133
               

               
Conread position:
               
144-463
               

               
Cow position:
               
chr24:33723761-33724106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
35, 221
               

               
Conread position:
               
145-425
               

               
Cow position:
               
chr24:17434693-17434399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 144
               

               
Conread position:
               
146-463
               

               
Cow position:
               
chr24:35529989-35529668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
60, 115
               

               
Conread position:
               
148-463
               

               
Cow position:
               
chr24:3430813-3430480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
46, 149
               

               
Conread position:
               
148-470
               

               
Cow position:
               
chr24:8886990-8886654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
44, 136
               

               
Conread position:
               
151-459
               

               
Cow position:
               
chr24:12993117-12992804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
152-463
               

               
Cow position:
               
chr24:25228988-25229313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 32
               

               
Conread position:
               
158-453
               

               
Cow position:
               
chr24:18355278-18354981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 72
               

               
Conread position:
               
165-500
               

               
Cow position:
               
chr24:17412789-17412444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 51
               

               
Conread position:
               
172-421
               

               
Cow position:
               
chr24:5655-5911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 91
               

               
Conread position:
               
183-409
               

               
Cow position:
               
chr24:5633003-5633232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
42, 98
               

               
Conread position:
               
191-330
               

               
Cow position:
               
chr24:35467182-35467323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
191-355
               

               
Cow position:
               
chr24:40837803-40837635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 82
               

               
Conread position:
               
191-446
               

               
Cow position:
               
chr24:10256065-10255817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
168, 78
               

               
Conread position:
               
191-462
               

               
Cow position:
               
chr24:39440537-39440811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
161, 58
               

               
Conread position:
               
191-468
               

               
Cow position:
               
chr24:39905425-39905721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 73
               

               
Conread position:
               
192-463
               

               
Cow position:
               
chr24:27968100-27967825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 20
               

               
Conread position:
               
194-411
               

               
Cow position:
               
chr24:29707783-29708006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 32
               

               
Conread position:
               
195-577
               

               
Cow position:
               
chr24:6140935-6141354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
30, 83
               

               
Conread position:
               
196-393
               

               
Cow position:
               
chr24:18017242-18017046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
37, 27
               

               
Conread position:
               
196-458
               

               
Cow position:
               
chr24:26928929-26929199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
29, 71
               

               
Conread position:
               
203-463
               

               
Cow position:
               
chr24:39218833-39219102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 10
               

               
Conread position:
               
205-434
               

               
Cow position:
               
chr24:10841201-10841442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
205-434
               

               
Cow position:
               
chr24:21918222-21918444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
26, 18
               

               
Conread position:
               
205-463
               

               
Cow position:
               
chr24:18243461-18243720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
205-467
               

               
Cow position:
               
chr24:3152571-3152836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
18, 69
               

               
Conread position:
               
206-463
               

               
Cow position:
               
chr24:43432795-43432546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 51
               

               
Conread position:
               
207-468
               

               
Cow position:
               
chr24:201635-201893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
11, 18
               

               
Conread position:
               
209-448
               

               
Cow position:
               
chr24:17284992-17285238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 5
               

               
Conread position:
               
213-351
               

               
Cow position:
               
chr24:24061809-24061949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
22, 10
               

               
Conread position:
               
214-433
               

               
Cow position:
               
chr24:22225177-22224952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
159, 56
               

               
Conread position:
               
218-580
               

               
Cow position:
               
chr24:25525038-25524666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
9, 30
               

               
Conread position:
               
221-461
               

               
Cow position:
               
chr24:6154801-6154571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 36
               

               
Conread position:
               
222-408
               

               
Cow position:
               
chr24:34782798-34782981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
151, 43
               

               
Conread position:
               
222-409
               

               
Cow position:
               
chr24:11005658-11005467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
14, 57
               

               
Conread position:
               
222-434
               

               
Cow position:
               
chr24:10012742-10012546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 46
               

               
Conread position:
               
222-461
               

               
Cow position:
               
chr24:18405321-18405560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
10, 116
               

               
Conread position:
               
222-461
               

               
Cow position:
               
chr24:34565113-34564873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 44
               

               
Conread position:
               
222-468
               

               
Cow position:
               
chr24:29360010-29360241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
139, 12
               

               
Conread position:
               
222-469
               

               
Cow position:
               
chr24:40091586-40091833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
10, 31
               

               
Conread position:
               
223-463
               

               
Cow position:
               
chr24:15473347-15473100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
12, 36
               

               
Conread position:
               
223-463
               

               
Cow position:
               
chr24:27341033-27341279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
154, 39
               

               
Conread position:
               
224-373
               

               
Cow position:
               
chr24:27552880-27552735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
224-398
               

               
Cow position:
               
chr24:27202586-27202409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
15, 34
               

               
Conread position:
               
224-400
               

               
Cow position:
               
chr24:885702-885873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
224-400
               

               
Cow position:
               
chr24:30226926-30226750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
122, 38
               

               
Conread position:
               
224-430
               

               
Cow position:
               
chr24:41301877-41302087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
125, 33
               

               
Conread position:
               
224-437
               

               
Cow position:
               
chr24:18771199-18771416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
31, 49
               

               
Conread position:
               
224-438
               

               
Cow position:
               
chr24:31382887-31382678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
38, 127
               

               
Conread position:
               
224-439
               

               
Cow position:
               
chr24:27781957-27781723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
224-447
               

               
Cow position:
               
chr24:20249910-20250143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
24, 31
               

               
Conread position:
               
224-462
               

               
Cow position:
               
chr24:33569457-33569690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 33
               

               
Conread position:
               
224-462
               

               
Cow position:
               
chr24:35572470-35572231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
149, 38
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:16625500-16625756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
45, 37
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:18266176-18266427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 57
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:20024599-20024352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
125, 38
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:23616682-23616439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:34315342-34315102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
131, 190
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:36486079-36486315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
154, 29
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:36554847-36555084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
154, 124
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:40184610-40184369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
147, 33
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr24:42007726-42007490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 41
               

               
Conread position:
               
224-470
               

               
Cow position:
               
chr24:14729389-14729146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
37, 157
               

               
Conread position:
               
225-376
               

               
Cow position:
               
chr24:14171704-14171857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
225-400
               

               
Cow position:
               
chr24:40984148-40983973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr24:24136876-24137106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 35
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr24:35794750-35794995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 85
               

               
Conread position:
               
226-385
               

               
Cow position:
               
chr24:18313957-18314119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
35, 14
               

               
Conread position:
               
226-425
               

               
Cow position:
               
chr24:42420656-42420863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
228-463
               

               
Cow position:
               
chr24:6340994-6340762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
125, 16
               

               
Conread position:
               
228-472
               

               
Cow position:
               
chr24:40055750-40055985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
150, 16
               

               
Conread position:
               
229-444
               

               
Cow position:
               
chr24:18695600-18695385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 32
               

               
Conread position:
               
229-463
               

               
Cow position:
               
chr24:3631484-3631262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
178, 28
               

               
Conread position:
               
229-463
               

               
Cow position:
               
chr24:27719779-27720008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
149, 8
               

               
Conread position:
               
229-471
               

               
Cow position:
               
chr24:22433619-22433368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 119
               

               
Conread position:
               
230-491
               

               
Cow position:
               
chr24:28354135-28353869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
43, 101
               

               
Conread position:
               
231-447
               

               
Cow position:
               
chr24:33221961-33222179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
147, 118
               

               
Conread position:
               
231-458
               

               
Cow position:
               
chr24:6487898-6487670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
147, 91
               

               
Conread position:
               
231-461
               

               
Cow position:
               
chr24:27207216-27207448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 31
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr24:11876867-11876628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 45
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr24:29180869-29180645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
23, 50
               

               
Conread position:
               
231-464
               

               
Cow position:
               
chr24:17363669-17363905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
35, 20
               

               
Conread position:
               
231-490
               

               
Cow position:
               
chr24:21860243-21860501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
118, 31
               

               
Conread position:
               
232-463
               

               
Cow position:
               
chr24:5152214-5151979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
29, 12
               

               
Conread position:
               
233-479
               

               
Cow position:
               
chr24:5849415-5849674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
234-463
               

               
Cow position:
               
chr24:30178217-30177981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
235-394
               

               
Cow position:
               
chr24:28023761-28023606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
235-397
               

               
Cow position:
               
chr24:18875123-18875279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
143, 26
               

               
Conread position:
               
235-446
               

               
Cow position:
               
chr24:18975179-18974962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
42, 113
               

               
Conread position:
               
240-463
               

               
Cow position:
               
chr24:27052524-27052749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 25
               

               
Conread position:
               
240-463
               

               
Cow position:
               
chr24:39493267-39493042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
22, 38
               

               
Conread position:
               
240-472
               

               
Cow position:
               
chr24:6160875-6161110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
29, 80
               

               
Conread position:
               
241-463
               

               
Cow position:
               
chr24:33238573-33238803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
106, 8
               

               
Conread position:
               
242-462
               

               
Cow position:
               
chr24:40908989-40908762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 20
               

               
Conread position:
               
245-463
               

               
Cow position:
               
chr24:35836277-35836493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 48
               

               
Conread position:
               
254-463
               

               
Cow position:
               
chr24:13626724-13626949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
254-463
               

               
Cow position:
               
chr24:27543521-27543731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
131, 18
               

               
Conread position:
               
254-463
               

               
Cow position:
               
chr24:32693662-32693447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
15, 27
               

               
Conread position:
               
257-581
               

               
Cow position:
               
chr24:39681809-39681468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
120, 66
               

               
Conread position:
               
258-451
               

               
Cow position:
               
chr24:14746587-14746392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
114, 12
               

               
Conread position:
               
261-463
               

               
Cow position:
               
chr24:20969850-20970047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
153, 16
               

               
Conread position:
               
262-463
               

               
Cow position:
               
chr24:5435096-5435302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
90, 18
               

               
Conread position:
               
265-434
               

               
Cow position:
               
chr24:31388479-31388308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
129, 76
               

               
Conread position:
               
265-463
               

               
Cow position:
               
chr24:6900771-6900569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
88, 14
               

               
Conread position:
               
266-478
               

               
Cow position:
               
chr24:21264562-21264782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
267-577
               

               
Cow position:
               
chr24:27270727-27270398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 137
               

               
Conread position:
               
268-519
               

               
Cow position:
               
chr24:17938704-17938461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
156, 12
               

               
Conread position:
               
269-472
               

               
Cow position:
               
chr24:14279835-14279624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
271-463
               

               
Cow position:
               
chr24:23442646-23442836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
273-463
               

               
Cow position:
               
chr24:27941070-27941263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
138, 75
               

               
Conread position:
               
274-463
               

               
Cow position:
               
chr24:591852-591655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
275-463
               

               
Cow position:
               
chr24:18324559-18324361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
275-471
               

               
Cow position:
               
chr24:6677449-6677240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
275-473
               

               
Cow position:
               
chr24:22305488-22305294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
17, 10
               

               
Conread position:
               
279-461
               

               
Cow position:
               
chr24:30776732-30776921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
281-463
               

               
Cow position:
               
chr24:11007151-11006960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
292-463
               

               
Cow position:
               
chr24:2730649-2730825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
295-409
               

               
Cow position:
               
chr24:3627211-3627099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
83, 49
               

               
Conread position:
               
295-462
               

               
Cow position:
               
chr24:38375202-38375031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 53
               

               
Conread position:
               
296-462
               

               
Cow position:
               
chr24:18732205-18732377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
296-471
               

               
Cow position:
               
chr24:27465661-27465833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
118, 51
               

               
Conread position:
               
297-463
               

               
Cow position:
               
chr24:28600699-28600863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
62, 83
               

               
Conread position:
               
310-471
               

               
Cow position:
               
chr24:6957080-6956914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
319-463
               

               
Cow position:
               
chr24:22193624-22193470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
325-463
               

               
Cow position:
               
chr24:19804578-19804432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
53, 24
               

               
Conread position:
               
326-463
               

               
Cow position:
               
chr24:29606181-29606322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
52, 18
               
Show alignments to all cow chromosomes.