Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_018626.y1
        

               Conread position:
               1-156
               

               Cow position:
               chr11:6620548-6620387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               1-164
               

               Cow position:
               chr11:55117216-55117388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               141
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-184
               

               Cow position:
               chr11:48232486-48232659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1-191
               

               Cow position:
               chr11:10127870-10127691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               93, 19
               

               Conread position:
               1-194
               

               Cow position:
               chr11:61137454-61137263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               124, 69
               

               Conread position:
               1-195
               

               Cow position:
               chr11:67931751-67931554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               80, 47
               

               Conread position:
               1-204
               

               Cow position:
               chr11:17192538-17192336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               152, 124
               

               Conread position:
               1-204
               

               Cow position:
               chr11:29947183-29946984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               181, 111
               

               Conread position:
               1-206
               

               Cow position:
               chr11:61454791-61454580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               170
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 183
               

               Conread position:
               1-209
               

               Cow position:
               chr11:25319794-25320003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               77, 132
               

               Conread position:
               1-212
               

               Cow position:
               chr11:10992023-10992235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               22, 127
               

               Conread position:
               1-212
               

               Cow position:
               chr11:38193895-38194108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               93, 138
               

               Conread position:
               1-234
               

               Cow position:
               chr11:71846605-71846363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               1-235
               

               Cow position:
               chr11:48901334-48901098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               185
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               205, 124
               

               Conread position:
               1-236
               

               Cow position:
               chr11:18484416-18484184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               190, 78
               

               Conread position:
               1-236
               

               Cow position:
               chr11:35148912-35149146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               127, 17
               

               Conread position:
               1-236
               

               Cow position:
               chr11:62045142-62045381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 93
               

               Conread position:
               1-246
               

               Cow position:
               chr11:71455531-71455787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               80, 236
               

               Conread position:
               1-246
               

               Cow position:
               chr11:77207792-77208037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 124
               

               Conread position:
               1-249
               

               Cow position:
               chr11:8105526-8105783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 130
               

               Conread position:
               1-249
               

               Cow position:
               chr11:41983703-41983459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               205, 89
               

               Conread position:
               1-255
               

               Cow position:
               chr11:32609735-32610002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               73, 136
               

               Conread position:
               1-257
               

               Cow position:
               chr11:85764695-85764941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               195, 75
               

               Conread position:
               1-267
               

               Cow position:
               chr11:18389113-18388857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               88, 21
               

               Conread position:
               1-267
               

               Cow position:
               chr11:37347218-37347494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               80, 43
               

               Conread position:
               1-267
               

               Cow position:
               chr11:58990254-58990518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 130
               

               Conread position:
               1-272
               

               Cow position:
               chr11:44642542-44642264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 124
               

               Conread position:
               1-274
               

               Cow position:
               chr11:8339661-8339383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 124
               

               Conread position:
               1-274
               

               Cow position:
               chr11:24584923-24585204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               8, 98
               

               Conread position:
               1-275
               

               Cow position:
               chr11:70459318-70459587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               177, 74
               

               Conread position:
               1-275
               

               Cow position:
               chr11:86926176-86925917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1-291
               

               Cow position:
               chr11:14649569-14649274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 71
               

               Conread position:
               1-297
               

               Cow position:
               chr11:16226449-16226746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               177, 98
               

               Conread position:
               1-297
               

               Cow position:
               chr11:63518758-63519045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               122, 82
               

               Conread position:
               1-298
               

               Cow position:
               chr11:21549239-21549527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               130, 83
               

               Conread position:
               1-298
               

               Cow position:
               chr11:43646674-43646365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               80, 39
               

               Conread position:
               1-299
               

               Cow position:
               chr11:13061480-13061188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               188, 69
               

               Conread position:
               1-300
               

               Cow position:
               chr11:4436076-4436368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 93
               

               Conread position:
               1-300
               

               Cow position:
               chr11:17321401-17321695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 132
               

               Conread position:
               1-300
               

               Cow position:
               chr11:24601713-24602013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 129
               

               Conread position:
               1-300
               

               Cow position:
               chr11:56728690-56728998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               80, 147
               

               Conread position:
               1-304
               

               Cow position:
               chr11:45872575-45872256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 0
               

               Conread position:
               1-307
               

               Cow position:
               chr11:866042-866346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               18, 149
               

               Conread position:
               1-307
               

               Cow position:
               chr11:4732082-4732398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               88, 133
               

               Conread position:
               1-307
               

               Cow position:
               chr11:7315383-7315093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               130, 166
               

               Conread position:
               1-307
               

               Cow position:
               chr11:30720841-30721154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               130, 106
               

               Conread position:
               1-307
               

               Cow position:
               chr11:30764223-30764546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               1-308
               

               Cow position:
               chr11:50111935-50112235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               222
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               72, 55
               

               Conread position:
               1-309
               

               Cow position:
               chr11:53773416-53773739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               80, 134
               

               Conread position:
               1-311
               

               Cow position:
               chr11:8428238-8428571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               80, 97
               

               Conread position:
               1-311
               

               Cow position:
               chr11:44637017-44636694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 63
               

               Conread position:
               1-311
               

               Cow position:
               chr11:46746378-46746693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 89
               

               Conread position:
               1-312
               

               Cow position:
               chr11:3780681-3780357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               73, 147
               

               Conread position:
               1-312
               

               Cow position:
               chr11:4323110-4323419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 78
               

               Conread position:
               1-312
               

               Cow position:
               chr11:10302445-10302142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               130, 55
               

               Conread position:
               1-312
               

               Cow position:
               chr11:10620582-10620267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               60, 52
               

               Conread position:
               1-312
               

               Cow position:
               chr11:18588837-18588525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               80, 153
               

               Conread position:
               1-312
               

               Cow position:
               chr11:25336819-25337126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               80, 21
               

               Conread position:
               1-312
               

               Cow position:
               chr11:29916281-29916602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               130, 78
               

               Conread position:
               1-312
               

               Cow position:
               chr11:34616012-34616320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 179
               

               Conread position:
               1-312
               

               Cow position:
               chr11:40467380-40467063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 211
               

               Conread position:
               1-312
               

               Cow position:
               chr11:61202906-61203226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               229
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               78, 153
               

               Conread position:
               1-312
               

               Cow position:
               chr11:80788167-80787846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 83
               

               Conread position:
               1-312
               

               Cow position:
               chr11:81300869-81300560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 133
               

               Conread position:
               1-312
               

               Cow position:
               chr11:83357136-83357455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 35
               

               Conread position:
               1-313
               

               Cow position:
               chr11:62574255-62573947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               207, 90
               

               Conread position:
               1-319
               

               Cow position:
               chr11:39115237-39115561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               97, 85
               

               Conread position:
               1-326
               

               Cow position:
               chr11:36647104-36647418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 128
               

               Conread position:
               1-331
               

               Cow position:
               chr11:5197334-5196995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               98, 93
               

               Conread position:
               1-333
               

               Cow position:
               chr11:43430703-43430375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 57
               

               Conread position:
               1-334
               

               Cow position:
               chr11:67600511-67600867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               255
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               78, 140
               

               Conread position:
               1-338
               

               Cow position:
               chr11:33341402-33341057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 43
               

               Conread position:
               1-338
               

               Cow position:
               chr11:34830036-34829698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               1-339
               

               Cow position:
               chr11:65409414-65409068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               246
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               1-340
               

               Cow position:
               chr11:49934999-49934641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 129
               

               Conread position:
               1-342
               

               Cow position:
               chr11:33526820-33527144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 21
               

               Conread position:
               1-342
               

               Cow position:
               chr11:36986705-36987041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 159
               

               Conread position:
               1-344
               

               Cow position:
               chr11:18698618-18698973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 128
               

               Conread position:
               1-344
               

               Cow position:
               chr11:53778356-53778710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 97
               

               Conread position:
               1-344
               

               Cow position:
               chr11:85723445-85723786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 90
               

               Conread position:
               1-345
               

               Cow position:
               chr11:1362737-1362373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-345
               

               Cow position:
               chr11:6234135-6233785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 129
               

               Conread position:
               1-345
               

               Cow position:
               chr11:12111724-12111364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               261
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               80, 127
               

               Conread position:
               1-345
               

               Cow position:
               chr11:33310714-33311072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               1-345
               

               Cow position:
               chr11:35579997-35580355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               79, 133
               

               Conread position:
               1-345
               

               Cow position:
               chr11:48271938-48272295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               1-345
               

               Cow position:
               chr11:51687982-51687634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               82, 132
               

               Conread position:
               1-345
               

               Cow position:
               chr11:62663489-62663140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               115, 75
               

               Conread position:
               1-345
               

               Cow position:
               chr11:64090343-64090003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               79, 128
               

               Conread position:
               1-345
               

               Cow position:
               chr11:69119043-69119388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               1-345
               

               Cow position:
               chr11:77128412-77128755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               198, 63
               

               Conread position:
               1-345
               

               Cow position:
               chr11:80530114-80530453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 71
               

               Conread position:
               1-345
               

               Cow position:
               chr11:83043617-83043267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               242
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               205, 78
               

               Conread position:
               1-346
               

               Cow position:
               chr11:17083554-17083214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               233
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               60, 125
               

               Conread position:
               1-346
               

               Cow position:
               chr11:63482682-63482334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 131
               

               Conread position:
               1-346
               

               Cow position:
               chr11:77759017-77758665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 118
               

               Conread position:
               1-347
               

               Cow position:
               chr11:44234102-44234452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               186, 11
               

               Conread position:
               1-348
               

               Cow position:
               chr11:23128796-23128442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 93
               

               Conread position:
               1-348
               

               Cow position:
               chr11:23251859-23251496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               262
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               80, 13
               

               Conread position:
               1-348
               

               Cow position:
               chr11:41986300-41985948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 150
               

               Conread position:
               1-348
               

               Cow position:
               chr11:71868860-71868505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 78
               

               Conread position:
               1-349
               

               Cow position:
               chr11:8988486-8988133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 127
               

               Conread position:
               1-349
               

               Cow position:
               chr11:11125406-11125761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               1-349
               

               Cow position:
               chr11:17227896-17227546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 67
               

               Conread position:
               1-349
               

               Cow position:
               chr11:20601983-20602325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               190, 70
               

               Conread position:
               1-349
               

               Cow position:
               chr11:28643825-28644186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               1-349
               

               Cow position:
               chr11:30934169-30934515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 32
               

               Conread position:
               1-349
               

               Cow position:
               chr11:33413977-33414335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 107
               

               Conread position:
               1-349
               

               Cow position:
               chr11:38235987-38236350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               253
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               93, 125
               

               Conread position:
               1-349
               

               Cow position:
               chr11:42358868-42359218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               260
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               201, 89
               

               Conread position:
               1-349
               

               Cow position:
               chr11:44031743-44032110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               254
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               82, 128
               

               Conread position:
               1-349
               

               Cow position:
               chr11:45632021-45631667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               1-349
               

               Cow position:
               chr11:48474452-48474802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               204, 44
               

               Conread position:
               1-349
               

               Cow position:
               chr11:54334078-54334427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 108
               

               Conread position:
               1-349
               

               Cow position:
               chr11:55052616-55052970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               7, 139
               

               Conread position:
               1-349
               

               Cow position:
               chr11:55744217-55744566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 102
               

               Conread position:
               1-349
               

               Cow position:
               chr11:60470436-60470100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               72, 64
               

               Conread position:
               1-349
               

               Cow position:
               chr11:65826988-65826652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               335, 56
               

               Conread position:
               1-349
               

               Cow position:
               chr11:68905319-68904979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               207, 45
               

               Conread position:
               1-349
               

               Cow position:
               chr11:76114398-76114741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 125
               

               Conread position:
               1-349
               

               Cow position:
               chr11:81137965-81138309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 16
               

               Conread position:
               1-349
               

               Cow position:
               chr11:83066239-83066586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 70
               

               Conread position:
               1-349
               

               Cow position:
               chr11:83397648-83398004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               125, 58
               

               Conread position:
               2-156
               

               Cow position:
               chr11:16795407-16795254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               80, 31
               

               Conread position:
               2-209
               

               Cow position:
               chr11:27462640-27462441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               2-249
               

               Cow position:
               chr11:62965809-62965550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 131
               

               Conread position:
               2-268
               

               Cow position:
               chr11:62880879-62880609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               129, 34
               

               Conread position:
               2-268
               

               Cow position:
               chr11:62979222-62979507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               211
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               2-275
               

               Cow position:
               chr11:2309618-2309897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               72, 99
               

               Conread position:
               2-298
               

               Cow position:
               chr11:32439204-32438904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               149, 57
               

               Conread position:
               2-301
               

               Cow position:
               chr11:2907781-2907477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 131
               

               Conread position:
               2-311
               

               Cow position:
               chr11:71168833-71168530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               202, 88
               

               Conread position:
               2-312
               

               Cow position:
               chr11:13190965-13191295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               2-312
               

               Cow position:
               chr11:17496001-17495681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               218
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               2-345
               

               Cow position:
               chr11:377904-377547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               2-345
               

               Cow position:
               chr11:65495583-65495245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 69
               

               Conread position:
               2-348
               

               Cow position:
               chr11:7589935-7590286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 127
               

               Conread position:
               2-349
               

               Cow position:
               chr11:1071347-1070992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 127
               

               Conread position:
               3-162
               

               Cow position:
               chr11:10294341-10294495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               3-187
               

               Cow position:
               chr11:31885266-31885447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               134, 94
               

               Conread position:
               3-209
               

               Cow position:
               chr11:40818893-40818688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               184, 174
               

               Conread position:
               3-212
               

               Cow position:
               chr11:11232708-11232500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               26, 66
               

               Conread position:
               3-212
               

               Cow position:
               chr11:30120916-30120712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               163
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               3-240
               

               Cow position:
               chr11:9837351-9837109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               205, 76
               

               Conread position:
               3-246
               

               Cow position:
               chr11:4412272-4412027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               78, 130
               

               Conread position:
               3-249
               

               Cow position:
               chr11:63516569-63516825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               78, 126
               

               Conread position:
               3-267
               

               Cow position:
               chr11:1486121-1485859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               193, 0
               

               Conread position:
               3-294
               

               Cow position:
               chr11:77766853-77766552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               3-308
               

               Cow position:
               chr11:287587-287279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               80, 39
               

               Conread position:
               3-309
               

               Cow position:
               chr11:76369776-76369465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               51, 79
               

               Conread position:
               3-311
               

               Cow position:
               chr11:45898309-45897990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 29
               

               Conread position:
               3-322
               

               Cow position:
               chr11:14308383-14308709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               78, 125
               

               Conread position:
               3-326
               

               Cow position:
               chr11:63157167-63156844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               224
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               77, 126
               

               Conread position:
               3-342
               

               Cow position:
               chr11:33754154-33753820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 76
               

               Conread position:
               3-344
               

               Cow position:
               chr11:73354308-73353966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 127
               

               Conread position:
               3-345
               

               Cow position:
               chr11:8148141-8147804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               187, 29
               

               Conread position:
               3-345
               

               Cow position:
               chr11:17831482-17831127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 150
               

               Conread position:
               3-345
               

               Cow position:
               chr11:48649706-48650067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               259
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               71, 144
               

               Conread position:
               3-345
               

               Cow position:
               chr11:58588090-58588439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 126
               

               Conread position:
               3-345
               

               Cow position:
               chr11:66188576-66188223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 128
               

               Conread position:
               3-346
               

               Cow position:
               chr11:10095089-10095440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 131
               

               Conread position:
               3-348
               

               Cow position:
               chr11:34113020-34113363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               193, 54
               

               Conread position:
               3-348
               

               Cow position:
               chr11:42836215-42835853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               235
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               3-348
               

               Cow position:
               chr11:46748121-46747763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 130
               

               Conread position:
               3-348
               

               Cow position:
               chr11:49152699-49153047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 55
               

               Conread position:
               3-348
               

               Cow position:
               chr11:87155261-87155617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 34
               

               Conread position:
               3-349
               

               Cow position:
               chr11:3769543-3769210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               75, 91
               

               Conread position:
               3-349
               

               Cow position:
               chr11:26535520-26535885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               258
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               70, 127
               

               Conread position:
               4-203
               

               Cow position:
               chr11:57111562-57111362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               76, 54
               

               Conread position:
               4-209
               

               Cow position:
               chr11:81162685-81162485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               90, 70
               

               Conread position:
               4-212
               

               Cow position:
               chr11:38071111-38071310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               164, 20
               

               Conread position:
               4-212
               

               Cow position:
               chr11:53719691-53719897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               90, 102
               

               Conread position:
               4-246
               

               Cow position:
               chr11:17112880-17112637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               118, 72
               

               Conread position:
               4-249
               

               Cow position:
               chr11:47586599-47586352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               192
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               90, 54
               

               Conread position:
               4-259
               

               Cow position:
               chr11:53130558-53130821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 126
               

               Conread position:
               4-267
               

               Cow position:
               chr11:48932837-48932571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 121
               

               Conread position:
               4-280
               

               Cow position:
               chr11:27386594-27386310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 87
               

               Conread position:
               4-280
               

               Cow position:
               chr11:81174636-81174913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 128
               

               Conread position:
               4-284
               

               Cow position:
               chr11:83196245-83196528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 126
               

               Conread position:
               4-312
               

               Cow position:
               chr11:8495783-8496093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               84, 188
               

               Conread position:
               4-312
               

               Cow position:
               chr11:31525611-31525939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               77, 43
               

               Conread position:
               4-312
               

               Cow position:
               chr11:32749854-32750171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               73, 189
               

               Conread position:
               4-312
               

               Cow position:
               chr11:36981314-36981624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               129, 75
               

               Conread position:
               4-312
               

               Cow position:
               chr11:43524369-43524669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               82, 49
               

               Conread position:
               4-312
               

               Cow position:
               chr11:70273047-70273367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               4-334
               

               Cow position:
               chr11:35363241-35363564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 130
               

               Conread position:
               4-338
               

               Cow position:
               chr11:63469629-63469963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               182, 79
               

               Conread position:
               4-339
               

               Cow position:
               chr11:64638777-64638437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 68
               

               Conread position:
               4-343
               

               Cow position:
               chr11:13499761-13500108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 66
               

               Conread position:
               4-343
               

               Cow position:
               chr11:67804498-67804835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               4-345
               

               Cow position:
               chr11:11752773-11752422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               77, 123
               

               Conread position:
               4-345
               

               Cow position:
               chr11:59872672-59873023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               248
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               70, 128
               

               Conread position:
               4-345
               

               Cow position:
               chr11:77705512-77705845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               93, 66
               

               Conread position:
               4-348
               

               Cow position:
               chr11:9221979-9221634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 123
               

               Conread position:
               4-348
               

               Cow position:
               chr11:59902636-59902988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               83, 15
               

               Conread position:
               4-349
               

               Cow position:
               chr11:3233827-3234174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               77, 186
               

               Conread position:
               4-349
               

               Cow position:
               chr11:7924843-7924495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 167
               

               Conread position:
               4-349
               

               Cow position:
               chr11:13043395-13043047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 64
               

               Conread position:
               4-349
               

               Cow position:
               chr11:17278916-17278577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 31
               

               Conread position:
               4-349
               

               Cow position:
               chr11:23138315-23137955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 257
               

               Conread position:
               4-349
               

               Cow position:
               chr11:30354813-30355157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               79, 168
               

               Conread position:
               4-349
               

               Cow position:
               chr11:30475745-30476097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 131
               

               Conread position:
               4-349
               

               Cow position:
               chr11:30708249-30708602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 86
               

               Conread position:
               4-349
               

               Cow position:
               chr11:35684751-35684402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 135
               

               Conread position:
               4-349
               

               Cow position:
               chr11:43361055-43360686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               4-349
               

               Cow position:
               chr11:80761633-80761279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               174, 183
               

               Conread position:
               4-349
               

               Cow position:
               chr11:84385898-84385540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               5-194
               

               Cow position:
               chr11:38794302-38794482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               5-204
               

               Cow position:
               chr11:80923587-80923378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               70, 132
               

               Conread position:
               5-249
               

               Cow position:
               chr11:81614885-81614642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               179, 63
               

               Conread position:
               5-298
               

               Cow position:
               chr11:35154080-35153777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               76, 128
               

               Conread position:
               5-300
               

               Cow position:
               chr11:22499604-22499318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               90, 134
               

               Conread position:
               5-300
               

               Cow position:
               chr11:37278452-37278175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               5-301
               

               Cow position:
               chr11:42003209-42002898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               75, 249
               

               Conread position:
               5-302
               

               Cow position:
               chr11:3726033-3726339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               5-309
               

               Cow position:
               chr11:32198687-32199000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               176, 94
               

               Conread position:
               5-312
               

               Cow position:
               chr11:33349954-33349640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 196
               

               Conread position:
               5-338
               

               Cow position:
               chr11:3833600-3833276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               179, 85
               

               Conread position:
               5-338
               

               Cow position:
               chr11:55333656-55333997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 124
               

               Conread position:
               5-345
               

               Cow position:
               chr11:34032450-34032104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               201, 74
               

               Conread position:
               5-345
               

               Cow position:
               chr11:49148796-49149144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 80
               

               Conread position:
               5-345
               

               Cow position:
               chr11:73512672-73512349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 47
               

               Conread position:
               5-346
               

               Cow position:
               chr11:259431-259077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               76, 47
               

               Conread position:
               5-349
               

               Cow position:
               chr11:1380442-1380774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               171, 60
               

               Conread position:
               5-349
               

               Cow position:
               chr11:63847597-63847943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 121
               

               Conread position:
               6-300
               

               Cow position:
               chr11:45646845-45646545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               190, 119
               

               Conread position:
               6-312
               

               Cow position:
               chr11:5416649-5416945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               86, 30
               

               Conread position:
               6-312
               

               Cow position:
               chr11:51756064-51756360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               80, 162
               

               Conread position:
               6-349
               

               Cow position:
               chr11:22978111-22977776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               179, 73
               

               Conread position:
               6-349
               

               Cow position:
               chr11:70745790-70745436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               67, 162
               

               Conread position:
               6-349
               

               Cow position:
               chr11:77319172-77319513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               172, 73
               

               Conread position:
               7-204
               

               Cow position:
               chr11:62155376-62155573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 56
               

               Conread position:
               7-257
               

               Cow position:
               chr11:30110717-30110968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               87, 113
               

               Conread position:
               7-263
               

               Cow position:
               chr11:73478370-73478620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               183, 118
               

               Conread position:
               7-337
               

               Cow position:
               chr11:38638870-38639197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 95
               

               Conread position:
               7-341
               

               Cow position:
               chr11:35874235-35873912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               321, 23
               

               Conread position:
               7-345
               

               Cow position:
               chr11:64904745-64905092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               83, 126
               

               Conread position:
               7-349
               

               Cow position:
               chr11:77745501-77745152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 69
               

               Conread position:
               8-249
               

               Cow position:
               chr11:47165387-47165143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               185, 86
               

               Conread position:
               8-298
               

               Cow position:
               chr11:27681248-27681548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               73, 117
               

               Conread position:
               8-349
               

               Cow position:
               chr11:83230636-83230302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               198, 14
               

               Conread position:
               9-162
               

               Cow position:
               chr11:81042313-81042462 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               9-298
               

               Cow position:
               chr11:16262281-16261978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               9-349
               

               Cow position:
               chr11:2083899-2084242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 67
               

               Conread position:
               10-212
               

               Cow position:
               chr11:25165196-25165396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               10-349
               

               Cow position:
               chr11:2917827-2917488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               175, 60
               

               Conread position:
               10-349
               

               Cow position:
               chr11:30639196-30638851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 172
               

               Conread position:
               10-349
               

               Cow position:
               chr11:36799546-36799209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 84
               

               Conread position:
               12-349
               

               Cow position:
               chr11:36659059-36658725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 67
               

               Conread position:
               13-292
               

               Cow position:
               chr11:22932214-22931930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               107, 43
               

               Conread position:
               14-209
               

               Cow position:
               chr11:41438468-41438268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               14-249
               

               Cow position:
               chr11:62808892-62808654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 116
               

               Conread position:
               14-267
               

               Cow position:
               chr11:77682928-77683185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               126, 33
               

               Conread position:
               14-312
               

               Cow position:
               chr11:48672457-48672773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               230
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               14, 141
               

               Conread position:
               14-334
               

               Cow position:
               chr11:50072718-50073020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               14-349
               

               Cow position:
               chr11:26117960-26117630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               112, 63
               

               Conread position:
               14-349
               

               Cow position:
               chr11:30924909-30925253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 65
               

               Conread position:
               15-300
               

               Cow position:
               chr11:57725071-57724776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               63, 177
               

               Conread position:
               16-349
               

               Cow position:
               chr11:26144326-26143997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 55
               

               Conread position:
               18-236
               

               Cow position:
               chr11:77241134-77241355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               78, 61
               

               Conread position:
               18-345
               

               Cow position:
               chr11:71501362-71501038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               104, 52
               

               Conread position:
               19-349
               

               Cow position:
               chr11:4663277-4662949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               187, 65
               

               Conread position:
               20-340
               

               Cow position:
               chr11:63434293-63433970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               61, 25
               

               Conread position:
               23-311
               

               Cow position:
               chr11:11469868-11469588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               183, 92
               

               Conread position:
               24-172
               

               Cow position:
               chr11:49396285-49396134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               57, 112
               

               Conread position:
               27-300
               

               Cow position:
               chr11:21728498-21728227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               154, 98
               

               Conread position:
               27-335
               

               Cow position:
               chr11:77546188-77546499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               179, 103
               

               Conread position:
               27-343
               

               Cow position:
               chr11:33348415-33348095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 203
               

               Conread position:
               27-344
               

               Cow position:
               chr11:70422800-70422502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               308, 64
               

               Conread position:
               27-345
               

               Cow position:
               chr11:32436098-32436428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 134
               

               Conread position:
               27-345
               

               Cow position:
               chr11:42044221-42043902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               53, 113
               

               Conread position:
               28-298
               

               Cow position:
               chr11:2509525-2509262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               187, 51
               

               Conread position:
               29-307
               

               Cow position:
               chr11:18341267-18340985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               48, 104
               

               Conread position:
               31-312
               

               Cow position:
               chr11:64044012-64044294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               33-341
               

               Cow position:
               chr11:69810679-69810994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               48, 96
               

               Conread position:
               34-346
               

               Cow position:
               chr11:81406381-81406072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               197, 91
               

               Conread position:
               35-348
               

               Cow position:
               chr11:23586413-23586736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               35-349
               

               Cow position:
               chr11:14470144-14470464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               35-349
               

               Cow position:
               chr11:39462395-39462722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               228
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               43, 141
               

               Conread position:
               36-291
               

               Cow position:
               chr11:2811945-2811690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               160, 40
               

               Conread position:
               36-349
               

               Cow position:
               chr11:34145138-34144826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               45, 93
               

               Conread position:
               37-212
               

               Cow position:
               chr11:21830573-21830399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               57, 89
               

               Conread position:
               37-348
               

               Cow position:
               chr11:35723756-35724066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               43, 99
               

               Conread position:
               38-348
               

               Cow position:
               chr11:15772942-15772615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               236
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               33, 239
               

               Conread position:
               38-349
               

               Cow position:
               chr11:19592218-19591896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 213
               

               Conread position:
               39-315
               

               Cow position:
               chr11:61859118-61858839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               39-349
               

               Cow position:
               chr11:36238563-36238876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               50, 26
               

               Conread position:
               40-208
               

               Cow position:
               chr11:65762814-65762651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               138, 41
               

               Conread position:
               40-297
               

               Cow position:
               chr11:16233148-16232889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               150, 39
               

               Conread position:
               41-300
               

               Cow position:
               chr11:11557952-11558220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               156, 84
               

               Conread position:
               41-333
               

               Cow position:
               chr11:52983474-52983757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               84, 46
               

               Conread position:
               41-348
               

               Cow position:
               chr11:13592522-13592833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               155, 27
               

               Conread position:
               42-259
               

               Cow position:
               chr11:18372862-18373083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 110
               

               Conread position:
               45-345
               

               Cow position:
               chr11:5485795-5486108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               49, 36
               

               Conread position:
               45-348
               

               Cow position:
               chr11:4207100-4207407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 85
               

               Conread position:
               46-345
               

               Cow position:
               chr11:65607905-65607594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 87
               

               Conread position:
               47-319
               

               Cow position:
               chr11:36286488-36286763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               158, 47
               

               Conread position:
               48-345
               

               Cow position:
               chr11:61958959-61958650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               48-345
               

               Cow position:
               chr11:77118505-77118794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               108, 23
               

               Conread position:
               51-274
               

               Cow position:
               chr11:57171031-57170807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               52-300
               

               Cow position:
               chr11:49231668-49231922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               29, 77
               

               Conread position:
               52-312
               

               Cow position:
               chr11:9463623-9463896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 143
               

               Conread position:
               52-326
               

               Cow position:
               chr11:27764950-27765228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               6, 75
               

               Conread position:
               52-345
               

               Cow position:
               chr11:72375894-72375581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               27, 77
               

               Conread position:
               52-349
               

               Cow position:
               chr11:71493066-71492763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 84
               

               Conread position:
               53-345
               

               Cow position:
               chr11:38577977-38577684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               31, 42
               

               Conread position:
               53-346
               

               Cow position:
               chr11:38334310-38334619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               28, 136
               

               Conread position:
               54-346
               

               Cow position:
               chr11:27932062-27932377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               27, 98
               

               Conread position:
               55-349
               

               Cow position:
               chr11:37804756-37804455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               141, 75
               

               Conread position:
               56-184
               

               Cow position:
               chr11:56524748-56524621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               74, 23
               

               Conread position:
               56-307
               

               Cow position:
               chr11:7458487-7458226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               56-345
               

               Cow position:
               chr11:68912941-68913235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               57-345
               

               Cow position:
               chr11:1157445-1157738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 73
               

               Conread position:
               57-349
               

               Cow position:
               chr11:63909853-63909568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               112, 33
               

               Conread position:
               59-322
               

               Cow position:
               chr11:84795927-84795679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               60-212
               

               Cow position:
               chr11:18399524-18399373 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               63, 19
               

               Conread position:
               60-312
               

               Cow position:
               chr11:5075420-5075167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 126
               

               Conread position:
               62-312
               

               Cow position:
               chr11:36058610-36058857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               63-210
               

               Cow position:
               chr11:29786794-29786653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               63-290
               

               Cow position:
               chr11:48042233-48041994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               64-312
               

               Cow position:
               chr11:7497837-7497586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               68-349
               

               Cow position:
               chr11:17493292-17493581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               128, 30
               

               Conread position:
               69-259
               

               Cow position:
               chr11:36672235-36672036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               71-331
               

               Cow position:
               chr11:48383340-48383600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               23, 203
               

               Conread position:
               72-289
               

               Cow position:
               chr11:67207561-67207767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               72-349
               

               Cow position:
               chr11:42296804-42296521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               75-328
               

               Cow position:
               chr11:38670501-38670758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               121, 55
               

               Conread position:
               75-345
               

               Cow position:
               chr11:9270909-9270632 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               205
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               134, 195
               

               Conread position:
               76-348
               

               Cow position:
               chr11:83687608-83687336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               79-348
               

               Cow position:
               chr11:30954821-30955098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 53
               

               Conread position:
               79-349
               

               Cow position:
               chr11:7873970-7874237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               258, 53
               

               Conread position:
               81-349
               

               Cow position:
               chr11:30830791-30830515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               131, 44
               

               Conread position:
               82-312
               

               Cow position:
               chr11:74380020-74380250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               49, 96
               

               Conread position:
               82-349
               

               Cow position:
               chr11:71008961-71009223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               49, 157
               

               Conread position:
               83-298
               

               Cow position:
               chr11:53511908-53512129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               123, 166
               

               Conread position:
               83-312
               

               Cow position:
               chr11:70950709-70950931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               48, 69
               

               Conread position:
               84-300
               

               Cow position:
               chr11:59862040-59862256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               47, 84
               

               Conread position:
               84-312
               

               Cow position:
               chr11:41176122-41175888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               124, 39
               

               Conread position:
               84-345
               

               Cow position:
               chr11:70978907-70978641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 88
               

               Conread position:
               85-349
               

               Cow position:
               chr11:16907214-16906952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               111, 40
               

               Conread position:
               88-215
               

               Cow position:
               chr11:86894508-86894635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               43, 7
               

               Conread position:
               91-278
               

               Cow position:
               chr11:41134231-41134039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               114, 34
               

               Conread position:
               91-344
               

               Cow position:
               chr11:45619184-45619446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               35, 143
               

               Conread position:
               91-345
               

               Cow position:
               chr11:32693637-32693390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               114, 39
               

               Conread position:
               91-345
               

               Cow position:
               chr11:40479020-40478758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               194
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               91-349
               

               Cow position:
               chr11:8545178-8544919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               105, 39
               

               Conread position:
               94-243
               

               Cow position:
               chr11:65843256-65843102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               94-289
               

               Cow position:
               chr11:56349178-56348985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               109, 38
               

               Conread position:
               94-311
               

               Cow position:
               chr11:75874914-75874695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               105, 31
               

               Conread position:
               94-312
               

               Cow position:
               chr11:33287115-33286896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               37, 90
               

               Conread position:
               94-340
               

               Cow position:
               chr11:16540700-16540952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               112, 31
               

               Conread position:
               94-342
               

               Cow position:
               chr11:63917627-63917385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               112, 12
               

               Conread position:
               94-345
               

               Cow position:
               chr11:6245159-6245409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               106, 38
               

               Conread position:
               94-345
               

               Cow position:
               chr11:76889886-76890140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               108, 38
               

               Conread position:
               94-349
               

               Cow position:
               chr11:83925883-83926141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 159
               

               Conread position:
               95-312
               

               Cow position:
               chr11:3419233-3419023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               98-349
               

               Cow position:
               chr11:6202288-6202542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               116, 27
               

               Conread position:
               99-280
               

               Cow position:
               chr11:21428151-21427964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               107, 31
               

               Conread position:
               99-338
               

               Cow position:
               chr11:28993889-28993652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               113, 24
               

               Conread position:
               99-349
               

               Cow position:
               chr11:51729131-51729385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               109, 26
               

               Conread position:
               101-345
               

               Cow position:
               chr11:63435362-63435615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               95, 24
               

               Conread position:
               102-349
               

               Cow position:
               chr11:70278263-70278014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               110, 28
               

               Conread position:
               104-337
               

               Cow position:
               chr11:48306496-48306261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               102, 21
               

               Conread position:
               104-347
               

               Cow position:
               chr11:32254371-32254120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               175
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               74, 44
               

               Conread position:
               105-346
               

               Cow position:
               chr11:84228865-84228622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               91, 58
               

               Conread position:
               107-345
               

               Cow position:
               chr11:86720561-86720323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               102, 18
               

               Conread position:
               112-345
               

               Cow position:
               chr11:70756333-70756572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               10, 79
               

               Conread position:
               115-345
               

               Cow position:
               chr11:64868158-64867926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               115-349
               

               Cow position:
               chr11:61348746-61348966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               121-263
               

               Cow position:
               chr11:31526605-31526455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               121-312
               

               Cow position:
               chr11:35791948-35791761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               121-345
               

               Cow position:
               chr11:29659425-29659654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               121-349
               

               Cow position:
               chr11:59024490-59024262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               101, 9
               

               Conread position:
               125-349
               

               Cow position:
               chr11:62742766-62742547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               203, 25
               

               Conread position:
               125-349
               

               Cow position:
               chr11:71807704-71807468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               71, 122
               

               Conread position:
               130-349
               

               Cow position:
               chr11:52690650-52690423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               66, 153
               

               Conread position:
               131-312
               

               Cow position:
               chr11:8461888-8462065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               131-349
               

               Cow position:
               chr11:47837186-47837418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 129
               

               Conread position:
               132-349
               

               Cow position:
               chr11:33345317-33345544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               137-349
               

               Cow position:
               chr11:63920170-63919955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               71, 52
               

               Conread position:
               151-332
               

               Cow position:
               chr11:75965757-75965571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               168-345
               

               Cow position:
               chr11:35536497-35536681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 116
               

               Conread position:
               214-349
               

               Cow position:
               chr11:53717844-53717708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               114, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-156
Cow position:	chr11:6620548-6620387 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	123
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	55, 0
Conread position:	1-164
Cow position:	chr11:55117216-55117388 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	141
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	80, 0
Conread position:	1-184
Cow position:	chr11:48232486-48232659 (view UCSC Genome Browser custom track)
Alignm length:	184
Alignm identity:	140
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	64, 0
Conread position:	1-191
Cow position:	chr11:10127870-10127691 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	143
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	93, 19
Conread position:	1-194
Cow position:	chr11:61137454-61137263 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	150
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	124, 69
Conread position:	1-195
Cow position:	chr11:67931751-67931554 (view UCSC Genome Browser custom track)
Alignm length:	200
Alignm identity:	152
Alignm E-value:	4e-35
Alignm gaps (pig, cow):	80, 47
Conread position:	1-204
Cow position:	chr11:17192538-17192336 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	155
Alignm E-value:	5e-38
Alignm gaps (pig, cow):	152, 124
Conread position:	1-206
Cow position:	chr11:61454791-61454580 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	170
Alignm E-value:	0
Alignm gaps (pig, cow):	77, 183
Conread position:	1-209
Cow position:	chr11:25319794-25320003 (view UCSC Genome Browser custom track)
Alignm length:	213
Alignm identity:	158
Alignm E-value:	4e-35
Alignm gaps (pig, cow):	77, 132
Conread position:	1-212
Cow position:	chr11:10992023-10992235 (view UCSC Genome Browser custom track)
Alignm length:	215
Alignm identity:	158
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	22, 127
Conread position:	1-234
Cow position:	chr11:71846605-71846363 (view UCSC Genome Browser custom track)
Alignm length:	245
Alignm identity:	185
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	80, 128
Conread position:	1-235
Cow position:	chr11:48901334-48901098 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	185
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	205, 124
Conread position:	1-236
Cow position:	chr11:18484416-18484184 (view UCSC Genome Browser custom track)
Alignm length:	240
Alignm identity:	181
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	190, 78
Conread position:	1-246
Cow position:	chr11:71455531-71455787 (view UCSC Genome Browser custom track)
Alignm length:	258
Alignm identity:	189
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	80, 236
Conread position:	1-249
Cow position:	chr11:8105526-8105783 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	206
Alignm E-value:	0
Alignm gaps (pig, cow):	195, 130
Conread position:	1-255
Cow position:	chr11:32609735-32610002 (view UCSC Genome Browser custom track)
Alignm length:	270
Alignm identity:	202
Alignm E-value:	2.94273e-44
Alignm gaps (pig, cow):	73, 136
Conread position:	1-257
Cow position:	chr11:85764695-85764941 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	194
Alignm E-value:	6e-39
Alignm gaps (pig, cow):	195, 75
Conread position:	1-267
Cow position:	chr11:18389113-18388857 (view UCSC Genome Browser custom track)
Alignm length:	274
Alignm identity:	201
Alignm E-value:	3e-34
Alignm gaps (pig, cow):	88, 21
Conread position:	1-272
Cow position:	chr11:44642542-44642264 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	209
Alignm E-value:	0
Alignm gaps (pig, cow):	187, 124
Conread position:	1-274
Cow position:	chr11:8339661-8339383 (view UCSC Genome Browser custom track)
Alignm length:	283
Alignm identity:	212
Alignm E-value:	0
Alignm gaps (pig, cow):	205, 124