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Cow genome map

           
Conread name:
           
rpigcf0_018626.y1
        

               
Conread position:
               
1-194
               

               
Cow position:
               
chr15:6082315-6082508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
130, 161
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr15:53281221-53281023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr15:7827710-7827917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
16, 78
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr15:41583237-41583031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
184, 124
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr15:12316251-12316044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr15:13846250-13846473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
109, 89
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr15:23486846-23487050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr15:13683957-13684180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
195, 57
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr15:28126722-28126958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
207, 93
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr15:52739797-52740046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
121, 19
               

               
Conread position:
               
1-245
               

               
Cow position:
               
chr15:6586386-6586639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr15:40009323-40009577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 125
               

               
Conread position:
               
1-252
               

               
Cow position:
               
chr15:5498702-5498963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
124, 132
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr15:41225236-41225513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr15:36782005-36782282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 84
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr15:40798099-40798384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr15:5727965-5727692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
204, 109
               

               
Conread position:
               
1-286
               

               
Cow position:
               
chr15:52778202-52778490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
130, 96
               

               
Conread position:
               
1-293
               

               
Cow position:
               
chr15:8962327-8962040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
196, 119
               

               
Conread position:
               
1-294
               

               
Cow position:
               
chr15:5632999-5632710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 78
               

               
Conread position:
               
1-296
               

               
Cow position:
               
chr15:27281191-27280898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 67
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr15:16543137-16543422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
214, 69
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr15:21908261-21907960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr15:29604390-29604676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:4535234-4534934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 89
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:4676679-4676975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 52
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:6462175-6462474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 89
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:16307743-16307445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:20472219-20472525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:22532568-22532275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:23180749-23180463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
124, 46
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:31283695-31283408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:33285209-33284900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr15:41360636-41360927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 13
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr15:27123223-27123518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
80, 153
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr15:12304968-12304650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 124
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr15:49738720-49739022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
209, 96
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr15:24128976-24128672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 149
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr15:25584762-25585079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr15:32979707-32980022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr15:38394747-38394439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 194
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr15:51427496-51427818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
130, 112
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr15:40343577-40343245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
118, 134
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr15:363345-363014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
165, 48
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr15:45479334-45478988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 171
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr15:29810436-29810108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 89
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr15:23767938-23768275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
328, 73
               

               
Conread position:
               
1-341
               

               
Cow position:
               
chr15:21803330-21803676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr15:50957468-50957821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 307
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr15:33625279-33624935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
95, 67
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:608490-608123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:794686-795045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:1298063-1297716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 9
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:14020798-14020462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 46
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:17233521-17233170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:20482510-20482870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
76, 243
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:20486890-20487226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 78
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:22939006-22939348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 89
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr15:50302513-50302161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
30, 130
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr15:13554668-13554329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 84
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr15:27972888-27973242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr15:37381958-37381603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 278
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr15:40999731-41000094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 135
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr15:45323110-45322762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 12
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr15:16616521-16616166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr15:22938450-22938788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 89
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr15:36435537-36435179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr15:49922466-49922108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 11
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:19186288-19186640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 133
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:20458973-20459335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:20534122-20534477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 90
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:21894109-21893752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 125
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:23798192-23798557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:30047209-30047572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 131
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:34206870-34207214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
158, 71
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:35642347-35641988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 310
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:35945869-35945503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
55, 139
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr15:39621665-39621311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
2-176
               

               
Cow position:
               
chr15:241173-240995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
2-296
               

               
Cow position:
               
chr15:7962403-7962104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
154, 119
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr15:35417294-35417628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
2-336
               

               
Cow position:
               
chr15:6385689-6385352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
91, 134
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr15:22168384-22168050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
326, 130
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr15:1329773-1330126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr15:5683460-5683127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
204, 77
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr15:43626788-43626446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 77
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr15:15707795-15707991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
3-274
               

               
Cow position:
               
chr15:14505751-14505479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
77, 52
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr15:50177421-50177134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
195, 51
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr15:21608406-21608697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
175, 60
               

               
Conread position:
               
3-325
               

               
Cow position:
               
chr15:50322920-50322592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 120
               

               
Conread position:
               
3-332
               

               
Cow position:
               
chr15:8230256-8230576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
59, 65
               

               
Conread position:
               
3-341
               

               
Cow position:
               
chr15:45217145-45216820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
91, 109
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr15:25208440-25208778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr15:30982241-30981919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 39
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr15:16604147-16603802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 128
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr15:46563159-46563506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 125
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr15:19771449-19771109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
175, 33
               

               
Conread position:
               
4-191
               

               
Cow position:
               
chr15:9267739-9267914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr15:47105361-47105164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
79, 125
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr15:46611243-46611012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
187, 66
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr15:53680444-53680683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
208, 117
               

               
Conread position:
               
4-249
               

               
Cow position:
               
chr15:143907-144151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
86, 189
               

               
Conread position:
               
4-266
               

               
Cow position:
               
chr15:19403302-19403050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr15:52380615-52380344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
191, 86
               

               
Conread position:
               
4-269
               

               
Cow position:
               
chr15:9871086-9871363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr15:30820511-30820794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 103
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr15:2928883-2929161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
241, 23
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr15:9493969-9494272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr15:4093600-4093910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
76, 130
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr15:21832100-21832420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr15:6970310-6969999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
89, 125
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr15:42143177-42142871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
46, 34
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr15:51822466-51822164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
77, 23
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr15:14740343-14740674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
16, 317
               

               
Conread position:
               
4-327
               

               
Cow position:
               
chr15:6657430-6657095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr15:26903519-26903171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
8, 97
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr15:52482505-52482847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
4-342
               

               
Cow position:
               
chr15:53164344-53164002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 9
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr15:22531986-22531646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 127
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr15:7191937-7192285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr15:13285358-13284999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
124, 75
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr15:21941522-21941868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr15:48851173-48851508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
44, 52
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr15:6226874-6227208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
308, 82
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr15:5234680-5235024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 121
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr15:16583387-16583717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 85
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr15:21421266-21420914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr15:24797489-24797833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
81, 51
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr15:26911756-26912099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 8
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr15:34140305-34139954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
59, 130
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr15:39406059-39405718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 158
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr15:33243481-33243284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
76, 177
               

               
Conread position:
               
5-225
               

               
Cow position:
               
chr15:51632727-51632933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
5-235
               

               
Cow position:
               
chr15:21523113-21522874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr15:23703096-23702856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
200, 89
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr15:9928681-9928384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
191, 107
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr15:18605707-18605432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
126, 39
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr15:5571313-5571606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 208
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr15:23567803-23568115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
123, 39
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr15:10245684-10246005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr15:47842935-47843262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
191, 120
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr15:20352157-20351816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 125
               

               
Conread position:
               
5-344
               

               
Cow position:
               
chr15:35112565-35112904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
126, 74
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr15:4138460-4138113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr15:16112728-16112377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr15:33976370-33976718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 74
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr15:16927759-16928121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 37
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr15:17100391-17100736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 74
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr15:36621741-36621371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
6-265
               

               
Cow position:
               
chr15:14856155-14856409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
116, 52
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr15:21365875-21366172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
116, 71
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr15:15881257-15880937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
6-337
               

               
Cow position:
               
chr15:10456688-10457026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
75, 59
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr15:21388842-21389190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 129
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr15:38806174-38806479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
74, 187
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr15:45094-45447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 127
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr15:20289766-20290085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr15:27863000-27863349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
10, 124
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr15:20370142-20370482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 72
               

               
Conread position:
               
8-312
               

               
Cow position:
               
chr15:23115152-23114845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
94, 16
               

               
Conread position:
               
9-345
               

               
Cow position:
               
chr15:11995706-11996049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 67
               

               
Conread position:
               
9-349
               

               
Cow position:
               
chr15:10088633-10088290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
10-299
               

               
Cow position:
               
chr15:5536072-5535783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
11, 60
               

               
Conread position:
               
10-311
               

               
Cow position:
               
chr15:13515690-13515378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
71, 119
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr15:53353234-53353571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
168, 77
               

               
Conread position:
               
12-194
               

               
Cow position:
               
chr15:43765850-43765663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
14-252
               

               
Cow position:
               
chr15:10846036-10845790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
14-311
               

               
Cow position:
               
chr15:20390964-20391263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 92
               

               
Conread position:
               
14-345
               

               
Cow position:
               
chr15:50341429-50341097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
170, 54
               

               
Conread position:
               
14-349
               

               
Cow position:
               
chr15:4918738-4919093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr15:27900194-27900537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr15:47843797-47844120 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 111
               

               
Conread position:
               
23-297
               

               
Cow position:
               
chr15:225498-225778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 89
               

               
Conread position:
               
23-344
               

               
Cow position:
               
chr15:26573692-26573358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 118
               

               
Conread position:
               
24-345
               

               
Cow position:
               
chr15:51898535-51898205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 109
               

               
Conread position:
               
24-348
               

               
Cow position:
               
chr15:44658664-44658337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
27-345
               

               
Cow position:
               
chr15:24031480-24031177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
307, 8
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr15:1722550-1722877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
29-348
               

               
Cow position:
               
chr15:44437033-44436727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
31-346
               

               
Cow position:
               
chr15:1083076-1083395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
31-349
               

               
Cow position:
               
chr15:1804031-1804365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
32-318
               

               
Cow position:
               
chr15:9526172-9526473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
35-249
               

               
Cow position:
               
chr15:34144862-34145080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
171, 95
               

               
Conread position:
               
35-346
               

               
Cow position:
               
chr15:17663970-17664275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
174, 59
               

               
Conread position:
               
36-345
               

               
Cow position:
               
chr15:2141003-2141326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
37-309
               

               
Cow position:
               
chr15:9622484-9622197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
37-322
               

               
Cow position:
               
chr15:39436503-39436218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
163, 56
               

               
Conread position:
               
37-345
               

               
Cow position:
               
chr15:19908804-19908511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
44, 74
               

               
Conread position:
               
37-349
               

               
Cow position:
               
chr15:16667208-16667522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
44, 92
               

               
Conread position:
               
37-349
               

               
Cow position:
               
chr15:21821629-21821951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 129
               

               
Conread position:
               
40-345
               

               
Cow position:
               
chr15:36773406-36773716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
41-300
               

               
Cow position:
               
chr15:30985492-30985754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 214
               

               
Conread position:
               
41-300
               

               
Cow position:
               
chr15:41125280-41125549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 92
               

               
Conread position:
               
43-312
               

               
Cow position:
               
chr15:16439540-16439820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
43, 135
               

               
Conread position:
               
44-184
               

               
Cow position:
               
chr15:5044171-5044308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
36, 56
               

               
Conread position:
               
44-235
               

               
Cow position:
               
chr15:39619442-39619247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
35, 84
               

               
Conread position:
               
45-345
               

               
Cow position:
               
chr15:245057-244758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
149, 42
               

               
Conread position:
               
47-300
               

               
Cow position:
               
chr15:41045686-41045429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
42, 9
               

               
Conread position:
               
50-312
               

               
Cow position:
               
chr15:5444261-5443995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
49, 15
               

               
Conread position:
               
51-252
               

               
Cow position:
               
chr15:36724905-36725107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
52-348
               

               
Cow position:
               
chr15:32323929-32324231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 223
               

               
Conread position:
               
56-234
               

               
Cow position:
               
chr15:18322658-18322836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
58-345
               

               
Cow position:
               
chr15:22871880-22871591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
35, 76
               

               
Conread position:
               
62-269
               

               
Cow position:
               
chr15:16657758-16657546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
142, 9
               

               
Conread position:
               
63-259
               

               
Cow position:
               
chr15:12441561-12441761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
143, 5
               

               
Conread position:
               
64-310
               

               
Cow position:
               
chr15:47279876-47280126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
132, 68
               

               
Conread position:
               
64-349
               

               
Cow position:
               
chr15:23572415-23572713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
61, 178
               

               
Conread position:
               
67-184
               

               
Cow position:
               
chr15:43750775-43750659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
68-345
               

               
Cow position:
               
chr15:39316575-39316865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
69-307
               

               
Cow position:
               
chr15:11560251-11560499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
5, 121
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr15:12655656-12655893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
72-346
               

               
Cow position:
               
chr15:10608049-10608329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 49
               

               
Conread position:
               
73-280
               

               
Cow position:
               
chr15:16904882-16904673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
73-345
               

               
Cow position:
               
chr15:4296019-4295740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 51
               

               
Conread position:
               
75-300
               

               
Cow position:
               
chr15:10737496-10737721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
75-345
               

               
Cow position:
               
chr15:11559104-11559378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
121, 22
               

               
Conread position:
               
79-249
               

               
Cow position:
               
chr15:23927221-23927400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
54, 20
               

               
Conread position:
               
79-300
               

               
Cow position:
               
chr15:17858989-17859203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
79-343
               

               
Cow position:
               
chr15:5726573-5726304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
132, 52
               

               
Conread position:
               
81-349
               

               
Cow position:
               
chr15:25386689-25386412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
50, 151
               

               
Conread position:
               
82-345
               

               
Cow position:
               
chr15:8354289-8354018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
115, 43
               

               
Conread position:
               
83-300
               

               
Cow position:
               
chr15:16018279-16018059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
83-348
               

               
Cow position:
               
chr15:43788488-43788236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
159, 40
               

               
Conread position:
               
84-312
               

               
Cow position:
               
chr15:50265246-50265474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
85-345
               

               
Cow position:
               
chr15:37205287-37205025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
130, 44
               

               
Conread position:
               
86-249
               

               
Cow position:
               
chr15:5691624-5691462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
119, 39
               

               
Conread position:
               
90-300
               

               
Cow position:
               
chr15:10512033-10512249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
96, 35
               

               
Conread position:
               
91-312
               

               
Cow position:
               
chr15:22930103-22930339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
91-345
               

               
Cow position:
               
chr15:286715-286455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
115, 40
               

               
Conread position:
               
91-345
               

               
Cow position:
               
chr15:662235-662491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
49, 17
               

               
Conread position:
               
91-349
               

               
Cow position:
               
chr15:12870627-12870891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
116, 39
               

               
Conread position:
               
93-312
               

               
Cow position:
               
chr15:11987173-11987396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
94-343
               

               
Cow position:
               
chr15:43599418-43599168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 11
               

               
Conread position:
               
94-345
               

               
Cow position:
               
chr15:915612-915864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
102, 31
               

               
Conread position:
               
96-312
               

               
Cow position:
               
chr15:23865836-23866058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
35, 120
               

               
Conread position:
               
97-343
               

               
Cow position:
               
chr15:9107267-9107014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
109, 33
               

               
Conread position:
               
97-345
               

               
Cow position:
               
chr15:18671222-18671477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
106, 28
               

               
Conread position:
               
99-345
               

               
Cow position:
               
chr15:1857956-1857701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
44, 26
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr15:4418172-4418426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr15:17337587-17337335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr15:28823590-28823844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
32, 77
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr15:29331232-29330979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
79, 26
               

               
Conread position:
               
101-349
               

               
Cow position:
               
chr15:49274178-49273932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
108, 24
               

               
Conread position:
               
105-345
               

               
Cow position:
               
chr15:5158604-5158351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
110-349
               

               
Cow position:
               
chr15:9781684-9781444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
110-349
               

               
Cow position:
               
chr15:31928679-31928923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
98, 76
               

               
Conread position:
               
113-344
               

               
Cow position:
               
chr15:39326297-39326539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
18, 132
               

               
Conread position:
               
114-349
               

               
Cow position:
               
chr15:35204934-35205179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
92, 5
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr15:5930104-5929874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
122-344
               

               
Cow position:
               
chr15:34284205-34284433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 9
               

               
Conread position:
               
125-345
               

               
Cow position:
               
chr15:5044277-5044498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
34, 64
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr15:23779872-23780094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 178
               

               
Conread position:
               
132-349
               

               
Cow position:
               
chr15:39286214-39286435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
10, 57
               

               
Conread position:
               
135-312
               

               
Cow position:
               
chr15:14474532-14474354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
55, 41
               

               
Conread position:
               
137-349
               

               
Cow position:
               
chr15:9465870-9465650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
159-349
               

               
Cow position:
               
chr15:41527806-41527999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 105
               

               
Conread position:
               
166-349
               

               
Cow position:
               
chr15:9497336-9497527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
166-349
               

               
Cow position:
               
chr15:14176336-14176526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
197-345
               

               
Cow position:
               
chr15:36388418-36388268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
197-349
               

               
Cow position:
               
chr15:44280228-44280075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
198-345
               

               
Cow position:
               
chr15:52432473-52432320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
198-348
               

               
Cow position:
               
chr15:29542003-29541852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
201-349
               

               
Cow position:
               
chr15:24629242-24629392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
203-345
               

               
Cow position:
               
chr15:23719363-23719506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
125, 0
               
Show alignments to all cow chromosomes.