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Cow genome map

           
Conread name:
           
rpigcf0_018626.y1
        

               
Conread position:
               
1-184
               

               
Cow position:
               
chr2:29717074-29716883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
80, 133
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr2:53574870-53575048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-190
               

               
Cow position:
               
chr2:46734220-46734407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
82, 125
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr2:45311364-45311171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr2:16692919-16693110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
130, 149
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr2:32489636-32489449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:30112775-30112979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
93, 134
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr2:56102707-56102501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr2:66916961-66916751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr2:68084277-68084487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 150
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr2:73069480-73069696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
52, 149
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr2:59179819-59180032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 154
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr2:20940202-20940429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
69, 132
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr2:9591692-9591935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr2:62685399-62685644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 122
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr2:31119778-31120042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr2:27076479-27076723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
167, 129
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr2:52386158-52385903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
67, 188
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr2:56828805-56828555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr2:58248102-58247862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
131, 67
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr2:77377999-77378257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
57, 134
               

               
Conread position:
               
1-264
               

               
Cow position:
               
chr2:80839367-80839097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
183, 26
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr2:23848057-23847791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 13
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr2:85091276-85090999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-273
               

               
Cow position:
               
chr2:45469767-45470047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 94
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr2:43578034-43577755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
195, 124
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr2:41185233-41185516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 128
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr2:45881004-45880729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
44, 68
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr2:11806082-11806376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
49, 12
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr2:50445657-50445959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
80, 135
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr2:36878455-36878156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr2:36630732-36631021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 202
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr2:39855552-39855857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
61, 9
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr2:82311443-82311133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 70
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr2:74353658-74353965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr2:988454-988753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr2:40403258-40402960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
192, 67
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr2:46330819-46331130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr2:46745685-46745990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
35, 125
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr2:71437621-71437311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
80, 129
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr2:76340896-76340584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr2:69581749-69581440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 136
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr2:71800328-71800010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
74, 156
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr2:27358805-27359123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
17, 58
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr2:47047990-47047681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
190, 131
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr2:42384167-42384481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
93, 37
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr2:991935-992233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
79, 51
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr2:38747439-38747737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
205, 40
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr2:41451993-41452311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 17
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr2:47116150-47115841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
208, 78
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr2:59953093-59952781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
113, 73
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr2:85339697-85339380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 9
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr2:33497441-33497125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 197
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr2:36105033-36105349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
177, 78
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr2:39078137-39078457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
80, 147
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr2:70539613-70539293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr2:1352348-1352044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-313
               

               
Cow position:
               
chr2:21416076-21416377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 72
               

               
Conread position:
               
1-316
               

               
Cow position:
               
chr2:69676772-69676448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 187
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr2:18061867-18061539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 136
               

               
Conread position:
               
1-323
               

               
Cow position:
               
chr2:5297502-5297827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-325
               

               
Cow position:
               
chr2:8723964-8723631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr2:50766251-50766565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
78, 133
               

               
Conread position:
               
1-332
               

               
Cow position:
               
chr2:28653768-28653436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
129, 75
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr2:39564116-39564454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 123
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr2:29041644-29041998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr2:70579950-70579597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr2:26438962-26438613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr2:39489547-39489884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 107
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr2:49467382-49467740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr2:32264633-32264281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 192
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr2:39941248-39941587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
17, 129
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr2:55632538-55632887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 118
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:425581-425927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
127, 74
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:11696893-11697238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 127
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:15249946-15250294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 78
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:19493976-19494327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
102, 75
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:27173130-27173480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:43123082-43123452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:44081212-44081549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 68
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:44931497-44931149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
177, 31
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:64323014-64323353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 19
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:66959438-66959788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
80, 195
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:76561875-76562223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 124
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr2:82262616-82262262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr2:15059305-15058950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 132
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr2:16839396-16839749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
193, 122
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr2:50352627-50353007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
80, 187
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr2:32048251-32048596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 75
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr2:46204271-46204632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr2:47402968-47403324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
163, 78
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:6038767-6039129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 93
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:13354438-13354794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 129
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:14826048-14826393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 167
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:17114973-17114612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:21383094-21382735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:23271167-23270816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:26102543-26102884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 131
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:28257237-28257578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
134, 70
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:28711224-28710887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 61
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:31355466-31355814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:42183134-42183489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 13
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:42607834-42608183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 41
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:44170319-44170675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:44482883-44482538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 94
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:45439218-45439551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 78
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:45478831-45478480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 133
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:45499434-45499085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 67
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:45623788-45624131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 30
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:46231005-46230646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:46294274-46293934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 124
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:56846515-56846864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 175
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:59397296-59396937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 132
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:62644362-62644709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 46
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:65931733-65932082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
54, 38
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:66480415-66480069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 19
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:69579918-69579562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:72527715-72528076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr2:81388453-81388807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 134
               

               
Conread position:
               
2-161
               

               
Cow position:
               
chr2:80177999-80177840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-208
               

               
Cow position:
               
chr2:77157590-77157379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 133
               

               
Conread position:
               
2-277
               

               
Cow position:
               
chr2:46194559-46194839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 129
               

               
Conread position:
               
2-280
               

               
Cow position:
               
chr2:28118265-28118548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
206, 88
               

               
Conread position:
               
2-289
               

               
Cow position:
               
chr2:11616863-11617151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
206, 51
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr2:21974-21670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 67
               

               
Conread position:
               
2-311
               

               
Cow position:
               
chr2:53533043-53532734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
206, 79
               

               
Conread position:
               
2-334
               

               
Cow position:
               
chr2:70945165-70945505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 102
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr2:18621170-18621529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr2:28303090-28303432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 77
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr2:32417093-32416747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 35
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr2:51799557-51799214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 66
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr2:20900704-20900346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr2:22372183-22371835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 128
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr2:38362608-38362249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
3-194
               

               
Cow position:
               
chr2:71163947-71163760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
3-203
               

               
Cow position:
               
chr2:14396473-14396279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
75, 33
               

               
Conread position:
               
3-216
               

               
Cow position:
               
chr2:31910257-31910052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 125
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr2:1203446-1203696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
84, 126
               

               
Conread position:
               
3-246
               

               
Cow position:
               
chr2:21284704-21284946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
198, 63
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr2:64473870-64473623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
198, 87
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr2:61974560-61974836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
3-284
               

               
Cow position:
               
chr2:32114830-32115131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
47, 133
               

               
Conread position:
               
3-294
               

               
Cow position:
               
chr2:34535393-34535096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
3-298
               

               
Cow position:
               
chr2:52171016-52171321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
49, 135
               

               
Conread position:
               
3-309
               

               
Cow position:
               
chr2:46344453-46344767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
191, 129
               

               
Conread position:
               
3-326
               

               
Cow position:
               
chr2:37072578-37072890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 133
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr2:32431956-32431635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
137, 73
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr2:14349562-14349874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
279, 82
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr2:46379322-46378992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
26, 90
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr2:85281347-85281022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
207, 24
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr2:13604230-13604582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 125
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr2:38273308-38273662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 94
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr2:42192209-42192550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr2:51638312-51638664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 243
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr2:73353555-73353905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 246
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr2:74249461-74249115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr2:6697728-6697390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr2:28820130-28820478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 24
               

               
Conread position:
               
3-347
               

               
Cow position:
               
chr2:70895795-70896150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr2:13369427-13369770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 84
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr2:15298310-15298654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 68
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr2:37113434-37113081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
173, 73
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr2:41248333-41248687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 32
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr2:42255198-42255552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 110
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr2:46312215-46312557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 90
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr2:67596247-67595903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
150, 91
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr2:14884050-14884228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
4-203
               

               
Cow position:
               
chr2:55480473-55480278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
14, 128
               

               
Conread position:
               
4-205
               

               
Cow position:
               
chr2:47105165-47104954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr2:43596405-43596205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
77, 129
               

               
Conread position:
               
4-241
               

               
Cow position:
               
chr2:51824693-51824933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 86
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr2:13467464-13467712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
4-265
               

               
Cow position:
               
chr2:40881851-40882104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
198, 86
               

               
Conread position:
               
4-274
               

               
Cow position:
               
chr2:23493299-23493576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 131
               

               
Conread position:
               
4-280
               

               
Cow position:
               
chr2:24270992-24271275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr2:39662464-39662765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr2:74260224-74260523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
197, 48
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr2:29268827-29269138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
192, 87
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr2:45912873-45912565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
43, 75
               

               
Conread position:
               
4-307
               

               
Cow position:
               
chr2:52332864-52332563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
147, 64
               

               
Conread position:
               
4-309
               

               
Cow position:
               
chr2:82957440-82957754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
90, 40
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr2:840925-841232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 191
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr2:29779767-29779459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr2:47090530-47090841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 75
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr2:30639956-30640275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
90, 26
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr2:41461129-41461461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
59, 126
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr2:54790044-54790383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 130
               

               
Conread position:
               
4-336
               

               
Cow position:
               
chr2:80325083-80324741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 101
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr2:50580134-50580468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 131
               

               
Conread position:
               
4-340
               

               
Cow position:
               
chr2:39815521-39815176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 125
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr2:30816722-30817079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr2:52485215-52484848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:13582349-13582696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 32
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:15674312-15674653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 121
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:20947138-20947486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:24434524-24434166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
77, 135
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:26042473-26042128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:27338009-27337666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 71
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:30642904-30642550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 167
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:33554393-33554057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:36435967-36436319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:37347565-37347898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
14, 71
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:38659017-38658674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 61
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:47990205-47990550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
208, 75
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:75600477-75600836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr2:80963879-80963537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 70
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr2:67301802-67302130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
187, 43
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr2:45535236-45535583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
197, 10
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr2:7524375-7524015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr2:19212278-19211940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 86
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr2:33262848-33262500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 35
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr2:39263257-39263604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr2:39584216-39584565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr2:46202033-46202379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr2:53430492-53430832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 127
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr2:53851198-53851553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 129
               

               
Conread position:
               
5-195
               

               
Cow position:
               
chr2:78744467-78744658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
5-197
               

               
Cow position:
               
chr2:24722675-24722489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr2:32406450-32406642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
76, 55
               

               
Conread position:
               
5-201
               

               
Cow position:
               
chr2:42599695-42599893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
89, 124
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr2:61187356-61187122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 85
               

               
Conread position:
               
5-280
               

               
Cow position:
               
chr2:4223499-4223221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 188
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr2:34695008-34695305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
191, 124
               

               
Conread position:
               
5-294
               

               
Cow position:
               
chr2:51594532-51594826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 89
               

               
Conread position:
               
5-304
               

               
Cow position:
               
chr2:1211001-1210692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 298
               

               
Conread position:
               
5-311
               

               
Cow position:
               
chr2:48864214-48863914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
76, 107
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr2:16594374-16594680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr2:16632703-16633009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 113
               

               
Conread position:
               
5-313
               

               
Cow position:
               
chr2:6539472-6539158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
5-325
               

               
Cow position:
               
chr2:45665798-45666125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 120
               

               
Conread position:
               
5-335
               

               
Cow position:
               
chr2:66404162-66403826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
126, 106
               

               
Conread position:
               
5-338
               

               
Cow position:
               
chr2:14089546-14089899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
5-344
               

               
Cow position:
               
chr2:46909671-46909324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
76, 128
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr2:18858367-18858032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
68, 59
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr2:56351150-56350804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
174, 295
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr2:70704020-70704371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr2:72183723-72183379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
82, 60
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr2:81349118-81348764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
5-346
               

               
Cow position:
               
chr2:14854089-14854419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 28
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr2:192694-192350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
76, 31
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr2:9687809-9687453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr2:17940521-17940171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 30
               

               
Conread position:
               
6-201
               

               
Cow position:
               
chr2:48617746-48617943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
6-202
               

               
Cow position:
               
chr2:57393530-57393331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
75, 106
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr2:46994987-46994790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
6-212
               

               
Cow position:
               
chr2:46033099-46033305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
68, 35
               

               
Conread position:
               
6-243
               

               
Cow position:
               
chr2:13543793-13544034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
125, 44
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr2:2673290-2673530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
6-246
               

               
Cow position:
               
chr2:68716901-68716655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 119
               

               
Conread position:
               
6-249
               

               
Cow position:
               
chr2:333308-333086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
6-274
               

               
Cow position:
               
chr2:14806569-14806300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
75, 105
               

               
Conread position:
               
6-280
               

               
Cow position:
               
chr2:6282245-6281974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
6-338
               

               
Cow position:
               
chr2:50277788-50278128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 153
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr2:16514557-16514890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 74
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr2:41954644-41954998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr2:64292932-64292614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
172, 56
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr2:46189324-46188979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
199, 73
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr2:69250909-69250551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 248
               

               
Conread position:
               
7-187
               

               
Cow position:
               
chr2:34492209-34492382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
7-203
               

               
Cow position:
               
chr2:39068074-39068268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
82, 119
               

               
Conread position:
               
7-241
               

               
Cow position:
               
chr2:46020674-46020913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
74, 106
               

               
Conread position:
               
7-269
               

               
Cow position:
               
chr2:37921012-37920749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
74, 101
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr2:1303718-1304062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 88
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr2:32446545-32446228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
199, 7
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr2:38205996-38205645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
86, 94
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr2:44229921-44229581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr2:76314090-76313753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
193, 72
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr2:54700215-54700573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
8-312
               

               
Cow position:
               
chr2:41145083-41145394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
73, 12
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr2:61485405-61485736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
200, 82
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr2:23712660-23712988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 69
               

               
Conread position:
               
8-349
               

               
Cow position:
               
chr2:70674500-70674840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 84
               

               
Conread position:
               
10-263
               

               
Cow position:
               
chr2:76183035-76182781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
196, 69
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr2:41147644-41147942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
10-345
               

               
Cow position:
               
chr2:45784503-45784852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
159, 114
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr2:27178425-27178760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
78, 48
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr2:4017092-4016731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
60, 264
               

               
Conread position:
               
10-349
               

               
Cow position:
               
chr2:44191251-44191596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
11-349
               

               
Cow position:
               
chr2:80275519-80275177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 114
               

               
Conread position:
               
12-212
               

               
Cow position:
               
chr2:45391752-45391544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
12-273
               

               
Cow position:
               
chr2:55960834-55960571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
119, 67
               

               
Conread position:
               
13-311
               

               
Cow position:
               
chr2:6160552-6160265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
210, 58
               

               
Conread position:
               
13-315
               

               
Cow position:
               
chr2:33532173-33531866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
118, 77
               

               
Conread position:
               
13-338
               

               
Cow position:
               
chr2:1486950-1487277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
17, 70
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr2:69419803-69419467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
183, 34
               

               
Conread position:
               
14-252
               

               
Cow position:
               
chr2:36007806-36007567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
167, 41
               

               
Conread position:
               
14-311
               

               
Cow position:
               
chr2:15597694-15597401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
174, 41
               

               
Conread position:
               
14-322
               

               
Cow position:
               
chr2:70663789-70664106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
137, 111
               

               
Conread position:
               
14-328
               

               
Cow position:
               
chr2:28319076-28318777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
59, 77
               

               
Conread position:
               
14-345
               

               
Cow position:
               
chr2:777920-777575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
64, 244
               

               
Conread position:
               
14-346
               

               
Cow position:
               
chr2:79403876-79404206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
243, 182
               

               
Conread position:
               
14-349
               

               
Cow position:
               
chr2:40728134-40728467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
15-328
               

               
Cow position:
               
chr2:42226494-42226167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
66, 94
               

               
Conread position:
               
15-343
               

               
Cow position:
               
chr2:69223455-69223111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
74, 335
               

               
Conread position:
               
16-312
               

               
Cow position:
               
chr2:68970511-68970818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
73, 163
               

               
Conread position:
               
16-313
               

               
Cow position:
               
chr2:5998724-5999027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
17-300
               

               
Cow position:
               
chr2:15063488-15063202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 61
               

               
Conread position:
               
18-299
               

               
Cow position:
               
chr2:61136509-61136798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
19-344
               

               
Cow position:
               
chr2:38795981-38795656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
110, 201
               

               
Conread position:
               
21-348
               

               
Cow position:
               
chr2:20791644-20791318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
59, 114
               

               
Conread position:
               
22-338
               

               
Cow position:
               
chr2:21380619-21380297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 249
               

               
Conread position:
               
22-348
               

               
Cow position:
               
chr2:84983018-84983365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 15
               

               
Conread position:
               
23-249
               

               
Cow position:
               
chr2:47189055-47189289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
60, 157
               

               
Conread position:
               
24-345
               

               
Cow position:
               
chr2:69823373-69823703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 14
               

               
Conread position:
               
26-312
               

               
Cow position:
               
chr2:39362874-39362598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
105, 34
               

               
Conread position:
               
27-326
               

               
Cow position:
               
chr2:16564472-16564770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 226
               

               
Conread position:
               
27-344
               

               
Cow position:
               
chr2:44232666-44232341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
27-349
               

               
Cow position:
               
chr2:19294390-19294704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
169, 52
               

               
Conread position:
               
28-344
               

               
Cow position:
               
chr2:29159692-29160018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
105, 136
               

               
Conread position:
               
28-347
               

               
Cow position:
               
chr2:56937474-56937795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 69
               

               
Conread position:
               
28-348
               

               
Cow position:
               
chr2:44051093-44051424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
53, 103
               

               
Conread position:
               
30-349
               

               
Cow position:
               
chr2:23301539-23301848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 133
               

               
Conread position:
               
31-176
               

               
Cow position:
               
chr2:1300595-1300452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
32-309
               

               
Cow position:
               
chr2:73637383-73637096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 17
               

               
Conread position:
               
34-348
               

               
Cow position:
               
chr2:37614740-37615057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
47, 101
               

               
Conread position:
               
37-204
               

               
Cow position:
               
chr2:46353695-46353530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
37-323
               

               
Cow position:
               
chr2:73360312-73360023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
44, 206
               

               
Conread position:
               
37-344
               

               
Cow position:
               
chr2:43789904-43790212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
154, 42
               

               
Conread position:
               
37-345
               

               
Cow position:
               
chr2:16505678-16505364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 90
               

               
Conread position:
               
37-345
               

               
Cow position:
               
chr2:41019418-41019097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 29
               

               
Conread position:
               
37-349
               

               
Cow position:
               
chr2:7383882-7383572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 50
               

               
Conread position:
               
38-345
               

               
Cow position:
               
chr2:47152738-47152438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
41, 7
               

               
Conread position:
               
39-236
               

               
Cow position:
               
chr2:66649422-66649616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
39, 133
               

               
Conread position:
               
39-312
               

               
Cow position:
               
chr2:13000723-13000991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
39-349
               

               
Cow position:
               
chr2:61421372-61421051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
40-313
               

               
Cow position:
               
chr2:3309227-3308947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
91, 34
               

               
Conread position:
               
40-345
               

               
Cow position:
               
chr2:1638400-1638716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
40-349
               

               
Cow position:
               
chr2:18997527-18997836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
138, 81
               

               
Conread position:
               
42-212
               

               
Cow position:
               
chr2:59915026-59915191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 53
               

               
Conread position:
               
43-209
               

               
Cow position:
               
chr2:17493518-17493347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
38, 86
               

               
Conread position:
               
44-312
               

               
Cow position:
               
chr2:25757826-25757548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
48-349
               

               
Cow position:
               
chr2:63332003-63331685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
25, 89
               

               
Conread position:
               
51-339
               

               
Cow position:
               
chr2:58056878-58057166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
53-269
               

               
Cow position:
               
chr2:78219915-78220135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
55-343
               

               
Cow position:
               
chr2:17328566-17328861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 32
               

               
Conread position:
               
56-345
               

               
Cow position:
               
chr2:13709289-13709582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
140, 76
               

               
Conread position:
               
56-346
               

               
Cow position:
               
chr2:6324056-6323757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
25, 196
               

               
Conread position:
               
56-348
               

               
Cow position:
               
chr2:58869343-58869047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
156, 74
               

               
Conread position:
               
57-299
               

               
Cow position:
               
chr2:19328365-19328613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
134, 33
               

               
Conread position:
               
62-349
               

               
Cow position:
               
chr2:12686963-12686673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
11, 114
               

               
Conread position:
               
63-349
               

               
Cow position:
               
chr2:46343313-46343032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
147, 93
               

               
Conread position:
               
65-349
               

               
Cow position:
               
chr2:84970880-84970596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
117, 25
               

               
Conread position:
               
68-311
               

               
Cow position:
               
chr2:46351935-46351704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
68-337
               

               
Cow position:
               
chr2:35664539-35664810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
69-299
               

               
Cow position:
               
chr2:70780927-70781156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
69-349
               

               
Cow position:
               
chr2:79837880-79837609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
71-294
               

               
Cow position:
               
chr2:67313856-67313628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr2:5301885-5301661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
72-300
               

               
Cow position:
               
chr2:26170577-26170812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
59, 116
               

               
Conread position:
               
73-312
               

               
Cow position:
               
chr2:51098257-51098006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
73-322
               

               
Cow position:
               
chr2:2740300-2740549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
105, 52
               

               
Conread position:
               
73-349
               

               
Cow position:
               
chr2:31460495-31460218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
133, 51
               

               
Conread position:
               
75-226
               

               
Cow position:
               
chr2:45537598-45537442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 55
               

               
Conread position:
               
76-345
               

               
Cow position:
               
chr2:60910038-60910303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
252, 49
               

               
Conread position:
               
80-345
               

               
Cow position:
               
chr2:65587007-65587270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
81-349
               

               
Cow position:
               
chr2:46119918-46119651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
128, 49
               

               
Conread position:
               
82-300
               

               
Cow position:
               
chr2:45542551-45542332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
82-349
               

               
Cow position:
               
chr2:41622327-41622598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
114, 67
               

               
Conread position:
               
84-312
               

               
Cow position:
               
chr2:68833759-68833540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
47, 68
               

               
Conread position:
               
84-348
               

               
Cow position:
               
chr2:69199469-69199205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
124, 48
               

               
Conread position:
               
87-312
               

               
Cow position:
               
chr2:13035962-13036197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 102
               

               
Conread position:
               
91-236
               

               
Cow position:
               
chr2:66563380-66563228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
91-346
               

               
Cow position:
               
chr2:54967859-54968121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
86, 39
               

               
Conread position:
               
91-349
               

               
Cow position:
               
chr2:37973469-37973210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 20
               

               
Conread position:
               
91-349
               

               
Cow position:
               
chr2:69367278-69367008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
94-215
               

               
Cow position:
               
chr2:76764848-76764730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
94-269
               

               
Cow position:
               
chr2:58563975-58563796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
94-345
               

               
Cow position:
               
chr2:58135541-58135279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 84
               

               
Conread position:
               
95-345
               

               
Cow position:
               
chr2:12558673-12558419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
163, 35
               

               
Conread position:
               
96-349
               

               
Cow position:
               
chr2:33472127-33471877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
107, 219
               

               
Conread position:
               
99-309
               

               
Cow position:
               
chr2:19156324-19156108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
99-344
               

               
Cow position:
               
chr2:43907324-43907077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
89, 31
               

               
Conread position:
               
99-346
               

               
Cow position:
               
chr2:24593732-24593981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr2:39335004-39334754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
111, 26
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr2:44025233-44025494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
32, 183
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr2:6901640-6901889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
106, 33
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr2:12682799-12682549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
31, 79
               

               
Conread position:
               
100-349
               

               
Cow position:
               
chr2:9370052-9369804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 25
               

               
Conread position:
               
101-335
               

               
Cow position:
               
chr2:80769981-80770217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
101-342
               

               
Cow position:
               
chr2:39237281-39237522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
102, 32
               

               
Conread position:
               
102-345
               

               
Cow position:
               
chr2:39597827-39598075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
104-301
               

               
Cow position:
               
chr2:45281518-45281718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
104-348
               

               
Cow position:
               
chr2:72407625-72407383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 25
               

               
Conread position:
               
110-349
               

               
Cow position:
               
chr2:17410133-17409890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
69, 21
               

               
Conread position:
               
110-349
               

               
Cow position:
               
chr2:21049445-21049213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
224, 76
               

               
Conread position:
               
116-345
               

               
Cow position:
               
chr2:12051027-12051262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
16, 143
               

               
Conread position:
               
116-346
               

               
Cow position:
               
chr2:62861467-62861701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 9
               

               
Conread position:
               
118-345
               

               
Cow position:
               
chr2:48130498-48130733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
5, 207
               

               
Conread position:
               
119-349
               

               
Cow position:
               
chr2:30351820-30351589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
90, 6
               

               
Conread position:
               
121-349
               

               
Cow position:
               
chr2:46971001-46971241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
81, 11
               

               
Conread position:
               
123-345
               

               
Cow position:
               
chr2:14733999-14734217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
83, 35
               

               
Conread position:
               
125-339
               

               
Cow position:
               
chr2:33988428-33988210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
127-345
               

               
Cow position:
               
chr2:13935596-13935820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
56, 127
               

               
Conread position:
               
130-298
               

               
Cow position:
               
chr2:387884-387710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
130-332
               

               
Cow position:
               
chr2:67927905-67927696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
52, 44
               

               
Conread position:
               
130-337
               

               
Cow position:
               
chr2:29734713-29734924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 126
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr2:44222712-44222937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr2:19138003-19137773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
131-345
               

               
Cow position:
               
chr2:55496395-55496183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
131-346
               

               
Cow position:
               
chr2:77281911-77282133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 130
               

               
Conread position:
               
133-338
               

               
Cow position:
               
chr2:22113809-22113591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
136-349
               

               
Cow position:
               
chr2:67386583-67386357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
138-348
               

               
Cow position:
               
chr2:13271522-13271303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
20, 111
               

               
Conread position:
               
144-348
               

               
Cow position:
               
chr2:15348295-15348509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
197-349
               

               
Cow position:
               
chr2:15219076-15219230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
203-349
               

               
Cow position:
               
chr2:64773356-64773502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
125, 8
               

               
Conread position:
               
205-349
               

               
Cow position:
               
chr2:38837545-38837400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
121, 0
               
Show alignments to all cow chromosomes.