Cow genome map

Conread name: rpigcf0_018626.y1

Conread position: 1-176
Cow position: chr21:7716965-7716785 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 87, 138

Conread position: 1-184
Cow position: chr21:34835597-34835427 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 1-194
Cow position: chr21:9278198-9278398 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 92, 193

Conread position: 1-194
Cow position: chr21:33419889-33419706 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 151
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 51

Conread position: 1-199
Cow position: chr21:13303645-13303843 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 124, 86

Conread position: 1-209
Cow position: chr21:912141-911935 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 1-210
Cow position: chr21:12616965-12617171 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 204, 78

Conread position: 1-212
Cow position: chr21:3381255-3381047 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 113, 13

Conread position: 1-236
Cow position: chr21:27743568-27743815 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 41

Conread position: 1-243
Cow position: chr21:28881968-28882210 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 197
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 130, 67

Conread position: 1-243
Cow position: chr21:31676324-31676572 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 56

Conread position: 1-249
Cow position: chr21:5137664-5137408 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 197
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 130, 180

Conread position: 1-257
Cow position: chr21:5636895-5636637 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 127

Conread position: 1-259
Cow position: chr21:363481-363722 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 91, 43

Conread position: 1-280
Cow position: chr21:24222712-24222427 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 208
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 80, 41

Conread position: 1-298
Cow position: chr21:44515100-44515392 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 219
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 139, 78

Conread position: 1-298
Cow position: chr21:46143769-46144087 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 228
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 80, 99

Conread position: 1-300
Cow position: chr21:25127434-25127734 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 214
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 17

Conread position: 1-300
Cow position: chr21:28512358-28512644 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 1-300
Cow position: chr21:32559528-32559235 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 211
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 205, 67

Conread position: 1-301
Cow position: chr21:42540394-42540091 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 214
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 70, 34

Conread position: 1-307
Cow position: chr21:39664563-39664261 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 126, 179

Conread position: 1-307
Cow position: chr21:45151797-45151492 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 207
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 130, 198

Conread position: 1-311
Cow position: chr21:31662286-31662608 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 231
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 78, 123

Conread position: 1-311
Cow position: chr21:33982984-33982669 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 128

Conread position: 1-311
Cow position: chr21:34391144-34390834 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 13

Conread position: 1-311
Cow position: chr21:35897800-35897485 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 177, 87

Conread position: 1-311
Cow position: chr21:45330782-45330466 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 270

Conread position: 1-312
Cow position: chr21:4080180-4080490 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 80, 17

Conread position: 1-312
Cow position: chr21:5595487-5595788 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 78, 27

Conread position: 1-312
Cow position: chr21:8618100-8618406 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 197

Conread position: 1-312
Cow position: chr21:13048371-13048051 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 138

Conread position: 1-312
Cow position: chr21:22194285-22193955 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 232
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 130, 75

Conread position: 1-312
Cow position: chr21:40786496-40786819 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 230
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 85, 151

Conread position: 1-312
Cow position: chr21:41198585-41198257 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 231
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 79, 0

Conread position: 1-312
Cow position: chr21:46912370-46912687 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 214
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 196, 19

Conread position: 1-319
Cow position: chr21:30607262-30606937 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 89

Conread position: 1-319
Cow position: chr21:33727635-33727310 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 226
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 98, 78

Conread position: 1-322
Cow position: chr21:23785857-23786183 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 150, 10

Conread position: 1-323
Cow position: chr21:24698315-24698633 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 210
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 6, 156

Conread position: 1-326
Cow position: chr21:5566815-5567142 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 114

Conread position: 1-334
Cow position: chr21:19258652-19258982 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 134

Conread position: 1-337
Cow position: chr21:32237123-32237446 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 0

Conread position: 1-343
Cow position: chr21:3763912-3763569 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 94

Conread position: 1-343
Cow position: chr21:37345276-37344927 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 232

Conread position: 1-343
Cow position: chr21:41597641-41597985 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 211

Conread position: 1-344
Cow position: chr21:6833878-6834224 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 75

Conread position: 1-344
Cow position: chr21:41620945-41621300 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 129

Conread position: 1-345
Cow position: chr21:17643144-17642810 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 249
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 61, 19

Conread position: 1-345
Cow position: chr21:18790730-18790390 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 71

Conread position: 1-345
Cow position: chr21:28734086-28733737 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 124

Conread position: 1-345
Cow position: chr21:30849113-30848765 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 254
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 195, 34

Conread position: 1-345
Cow position: chr21:38449626-38449273 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 252
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 100

Conread position: 1-345
Cow position: chr21:41974553-41974202 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 128

Conread position: 1-345
Cow position: chr21:44671579-44671920 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 128

Conread position: 1-345
Cow position: chr21:45355662-45356009 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 242
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 202, 124

Conread position: 1-345
Cow position: chr21:46849297-46848952 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 98

Conread position: 1-345
Cow position: chr21:47465295-47464943 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 252
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 93, 59

Conread position: 1-345
Cow position: chr21:47764286-47763942 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 11

Conread position: 1-348
Cow position: chr21:16696196-16696552 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 232
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 200, 27

Conread position: 1-348
Cow position: chr21:19196342-19195985 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 10, 136

Conread position: 1-348
Cow position: chr21:19766680-19767033 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 232
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 144, 131

Conread position: 1-348
Cow position: chr21:22718955-22718605 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 126

Conread position: 1-348
Cow position: chr21:25382835-25383205 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 262
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 65, 43

Conread position: 1-348
Cow position: chr21:38900599-38900952 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 129

Conread position: 1-349
Cow position: chr21:33547-33899 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 97

Conread position: 1-349
Cow position: chr21:81896-82247 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 247
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 80, 133

Conread position: 1-349
Cow position: chr21:643159-643504 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 89

Conread position: 1-349
Cow position: chr21:4282042-4281700 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 78

Conread position: 1-349
Cow position: chr21:9416068-9416429 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 349

Conread position: 1-349
Cow position: chr21:9990340-9990690 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 247
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 80, 35

Conread position: 1-349
Cow position: chr21:14760406-14760745 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 241
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 209, 80

Conread position: 1-349
Cow position: chr21:15445253-15444905 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 93, 225

Conread position: 1-349
Cow position: chr21:23568034-23568408 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 255
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 35, 141

Conread position: 1-349
Cow position: chr21:23586702-23587061 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 128

Conread position: 1-349
Cow position: chr21:29002336-29001977 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 257
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 80, 128

Conread position: 1-349
Cow position: chr21:30231877-30231519 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 322

Conread position: 1-349
Cow position: chr21:32339911-32339560 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 67

Conread position: 1-349
Cow position: chr21:33562841-33563183 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 261
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 35

Conread position: 1-349
Cow position: chr21:38120933-38121281 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 253
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 177, 78

Conread position: 1-349
Cow position: chr21:40589657-40589302 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 128

Conread position: 1-349
Cow position: chr21:42905552-42905218 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 241
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 125, 64

Conread position: 1-349
Cow position: chr21:44252000-44251663 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 223, 86

Conread position: 2-164
Cow position: chr21:31159083-31159250 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 142
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 79, 0

Conread position: 2-195
Cow position: chr21:10608629-10608434 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 184

Conread position: 2-231
Cow position: chr21:1464055-1464291 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 130, 0

Conread position: 2-255
Cow position: chr21:43240685-43240950 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 78, 0

Conread position: 2-338
Cow position: chr21:11645142-11644797 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 77

Conread position: 2-348
Cow position: chr21:36795430-36795782 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 77

Conread position: 2-349
Cow position: chr21:641411-641767 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 246
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 105, 50

Conread position: 2-349
Cow position: chr21:5153444-5153800 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 187

Conread position: 2-349
Cow position: chr21:13752720-13753054 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 224
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 47

Conread position: 3-176
Cow position: chr21:40065485-40065315 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 134
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 124, 54

Conread position: 3-206
Cow position: chr21:10882261-10882468 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 134

Conread position: 3-246
Cow position: chr21:16612457-16612701 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 205, 73

Conread position: 3-267
Cow position: chr21:6102439-6102164 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 41, 130

Conread position: 3-271
Cow position: chr21:46829440-46829180 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 185, 76

Conread position: 3-275
Cow position: chr21:36756442-36756705 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 208
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 193, 64

Conread position: 3-296
Cow position: chr21:25536824-25537124 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 209
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 97, 30

Conread position: 3-300
Cow position: chr21:33210026-33210318 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 126

Conread position: 3-300
Cow position: chr21:33729262-33729560 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 129, 81

Conread position: 3-334
Cow position: chr21:28989443-28989777 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 239
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 80, 17

Conread position: 3-335
Cow position: chr21:9940348-9940022 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 229
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 125, 24

Conread position: 3-339
Cow position: chr21:31253364-31253703 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 134

Conread position: 3-345
Cow position: chr21:3361187-3360839 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 105

Conread position: 3-345
Cow position: chr21:6051334-6051679 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 123

Conread position: 3-345
Cow position: chr21:13365172-13365518 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 175, 85

Conread position: 3-345
Cow position: chr21:17433427-17433094 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 231
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 131

Conread position: 3-345
Cow position: chr21:37299295-37299638 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 246
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 35, 123

Conread position: 3-345
Cow position: chr21:45473929-45473582 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 166

Conread position: 3-349
Cow position: chr21:17183750-17184097 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 27

Conread position: 3-349
Cow position: chr21:21169667-21169316 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 91

Conread position: 3-349
Cow position: chr21:24858139-24858495 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 126

Conread position: 3-349
Cow position: chr21:26648178-26647836 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 34

Conread position: 3-349
Cow position: chr21:27146164-27145811 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 302

Conread position: 3-349
Cow position: chr21:44565874-44565542 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 238
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 13, 57

Conread position: 4-200
Cow position: chr21:17410830-17410634 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 79, 24

Conread position: 4-204
Cow position: chr21:18494794-18494996 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 159
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 73, 125

Conread position: 4-236
Cow position: chr21:24765112-24765349 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 44, 117

Conread position: 4-292
Cow position: chr21:10727109-10727399 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 211
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 199, 83

Conread position: 4-300
Cow position: chr21:7564493-7564177 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 229
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 77, 23

Conread position: 4-310
Cow position: chr21:46777144-46776860 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 127, 49

Conread position: 4-327
Cow position: chr21:17174971-17175292 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 233
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 192

Conread position: 4-344
Cow position: chr21:42414274-42413922 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 124

Conread position: 4-345
Cow position: chr21:3585529-3585192 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 16

Conread position: 4-345
Cow position: chr21:45330112-45329774 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 163, 37

Conread position: 4-346
Cow position: chr21:1058905-1059252 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 91, 121

Conread position: 4-348
Cow position: chr21:14452058-14452413 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 54

Conread position: 4-349
Cow position: chr21:7582081-7581725 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 125

Conread position: 4-349
Cow position: chr21:10151623-10151985 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 96

Conread position: 4-349
Cow position: chr21:15976470-15976812 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 43

Conread position: 4-349
Cow position: chr21:20160512-20160856 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 121

Conread position: 4-349
Cow position: chr21:25344706-25345041 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 220, 67

Conread position: 4-349
Cow position: chr21:27863691-27863334 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 77, 130

Conread position: 4-349
Cow position: chr21:29069500-29069146 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 121

Conread position: 4-349
Cow position: chr21:29484812-29485158 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 75

Conread position: 4-349
Cow position: chr21:34010562-34010218 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 242
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 204, 64

Conread position: 4-349
Cow position: chr21:36297307-36297674 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 137

Conread position: 5-195
Cow position: chr21:28443548-28443358 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 127

Conread position: 5-214
Cow position: chr21:48251200-48250992 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 72, 127

Conread position: 5-287
Cow position: chr21:426619-426924 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 214
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 76, 0

Conread position: 5-300
Cow position: chr21:725062-724755 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 225
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 76, 126

Conread position: 5-300
Cow position: chr21:10601539-10601245 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 208
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 184, 56

Conread position: 5-307
Cow position: chr21:4905142-4904830 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 215
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 76, 15

Conread position: 5-309
Cow position: chr21:10007812-10007500 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 227
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 6, 59

Conread position: 5-334
Cow position: chr21:13585230-13584897 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 123, 63

Conread position: 5-334
Cow position: chr21:46973296-46972986 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 237
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 238, 63

Conread position: 5-344
Cow position: chr21:10514637-10514976 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 231
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 191, 28

Conread position: 5-345
Cow position: chr21:5898568-5898226 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 237
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 183, 82

Conread position: 5-345
Cow position: chr21:27341767-27341419 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 249
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 121, 71

Conread position: 5-349
Cow position: chr21:395705-396047 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 203, 65

Conread position: 5-349
Cow position: chr21:41579579-41579936 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 9

Conread position: 5-349
Cow position: chr21:42135794-42135436 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 245
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 76, 124

Conread position: 6-179
Cow position: chr21:13163721-13163894 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 90, 72

Conread position: 6-209
Cow position: chr21:48484613-48484415 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 125, 60

Conread position: 6-246
Cow position: chr21:35569556-35569308 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 187
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 38, 83

Conread position: 6-296
Cow position: chr21:25764465-25764762 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 196
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 75, 127

Conread position: 6-313
Cow position: chr21:43357430-43357113 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 26

Conread position: 6-319
Cow position: chr21:1591379-1591703 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 55

Conread position: 6-345
Cow position: chr21:5426774-5427113 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 70

Conread position: 6-349
Cow position: chr21:10263871-10264212 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 200, 73

Conread position: 6-349
Cow position: chr21:23322253-23321898 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 160

Conread position: 6-349
Cow position: chr21:27521497-27521160 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 118, 26

Conread position: 6-349
Cow position: chr21:34653913-34654253 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 239
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 198, 23

Conread position: 7-163
Cow position: chr21:23311113-23310957 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 25

Conread position: 7-256
Cow position: chr21:13898020-13898274 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 189, 72

Conread position: 7-309
Cow position: chr21:38867744-38867448 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 212
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 43, 30

Conread position: 7-331
Cow position: chr21:4998655-4998334 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 119

Conread position: 7-341
Cow position: chr21:42841761-42841425 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 189, 87

Conread position: 7-345
Cow position: chr21:10823387-10823735 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 248
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 16

Conread position: 7-349
Cow position: chr21:10000912-10001255 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 43

Conread position: 9-349
Cow position: chr21:3818050-3818388 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 49

Conread position: 9-349
Cow position: chr21:28244310-28244650 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 187, 9

Conread position: 10-249
Cow position: chr21:2785945-2785697 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 183
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 71, 119

Conread position: 10-341
Cow position: chr21:18065089-18064746 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 246
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 118, 126

Conread position: 11-349
Cow position: chr21:10114493-10114155 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 243
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 197, 88

Conread position: 13-212
Cow position: chr21:36793730-36793928 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 99, 117

Conread position: 13-348
Cow position: chr21:15584573-15584240 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 252
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 27

Conread position: 14-312
Cow position: chr21:47760614-47760910 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 216
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 67, 160

Conread position: 14-325
Cow position: chr21:39401433-39401745 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 111

Conread position: 14-349
Cow position: chr21:26244767-26245094 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 57

Conread position: 15-213
Cow position: chr21:42190329-42190139 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 55, 0

Conread position: 15-298
Cow position: chr21:38482762-38483034 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 187
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 197, 48

Conread position: 15-300
Cow position: chr21:16187965-16187677 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 207
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 191, 14

Conread position: 16-311
Cow position: chr21:41590716-41590424 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 174, 71

Conread position: 19-255
Cow position: chr21:5455144-5454906 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 47, 70

Conread position: 19-346
Cow position: chr21:45921215-45920882 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 107

Conread position: 22-305
Cow position: chr21:6910037-6909743 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 194
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 59, 112

Conread position: 22-349
Cow position: chr21:24642365-24642692 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 47

Conread position: 23-345
Cow position: chr21:10633793-10633465 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 238
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 96, 91

Conread position: 24-312
Cow position: chr21:12749376-12749097 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 208
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 64, 101

Conread position: 27-349
Cow position: chr21:6713673-6713343 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 237
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 10, 33

Conread position: 28-245
Cow position: chr21:14515700-14515916 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 10

Conread position: 28-307
Cow position: chr21:44962647-44962934 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 188
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 61, 32

Conread position: 29-343
Cow position: chr21:48176680-48176993 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 220
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 49, 72

Conread position: 29-349
Cow position: chr21:10005032-10004706 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 85

Conread position: 30-309
Cow position: chr21:19673669-19673945 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 190
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 186, 51

Conread position: 30-349
Cow position: chr21:957521-957850 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 101

Conread position: 31-297
Cow position: chr21:16981736-16982002 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 184
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 162, 53

Conread position: 31-345
Cow position: chr21:7825320-7825013 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 211
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 281, 63

Conread position: 32-349
Cow position: chr21:42007603-42007282 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 234
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 99, 39

Conread position: 34-349
Cow position: chr21:29978903-29978580 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 6

Conread position: 35-312
Cow position: chr21:17637758-17638034 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 197
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 44, 119

Conread position: 35-349
Cow position: chr21:48234299-48233985 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 218
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 168, 78

Conread position: 37-269
Cow position: chr21:8438946-8438725 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 37-345
Cow position: chr21:11359899-11360202 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 224
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 42, 69

Conread position: 37-345
Cow position: chr21:12462109-12461790 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 89

Conread position: 37-349
Cow position: chr21:28923978-28924290 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 60

Conread position: 38-236
Cow position: chr21:39809762-39809960 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 152
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 167, 52

Conread position: 38-349
Cow position: chr21:20152810-20153134 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 297

Conread position: 39-246
Cow position: chr21:34736894-34737106 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 141

Conread position: 39-348
Cow position: chr21:17875332-17875014 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 220
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 54, 97

Conread position: 40-209
Cow position: chr21:17856408-17856573 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 41, 92

Conread position: 40-311
Cow position: chr21:20260456-20260178 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 185
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 165, 85

Conread position: 40-326
Cow position: chr21:20418825-20418526 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 218
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 19, 95

Conread position: 43-300
Cow position: chr21:27668880-27669143 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 5

Conread position: 44-349
Cow position: chr21:10538394-10538075 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 226
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 22, 52

Conread position: 45-349
Cow position: chr21:30835234-30835543 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 223
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 161, 34

Conread position: 51-345
Cow position: chr21:30222217-30222521 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 77

Conread position: 53-312
Cow position: chr21:36789671-36789937 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 76

Conread position: 62-345
Cow position: chr21:25629025-25628736 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 197
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 47, 32

Conread position: 63-242
Cow position: chr21:4568173-4568357 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 133, 62

Conread position: 63-312
Cow position: chr21:18155681-18155424 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 184
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 5

Conread position: 63-349
Cow position: chr21:40168746-40168446 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 17, 218

Conread position: 65-344
Cow position: chr21:23980292-23980007 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 200
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 140, 0

Conread position: 67-345
Cow position: chr21:10673023-10673297 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 139, 51

Conread position: 68-299
Cow position: chr21:40432341-40432574 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 175
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 8, 23

Conread position: 69-265
Cow position: chr21:19210604-19210809 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 60

Conread position: 69-307
Cow position: chr21:9698193-9697943 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 72-334
Cow position: chr21:10561687-10561416 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 192
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 133, 53

Conread position: 72-345
Cow position: chr21:8206669-8206946 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 196
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 136, 53

Conread position: 72-349
Cow position: chr21:22465094-22465370 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 134, 53

Conread position: 75-312
Cow position: chr21:37790102-37789857 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 177
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 38

Conread position: 77-272
Cow position: chr21:30236917-30236722 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 10, 50

Conread position: 77-345
Cow position: chr21:10979041-10978774 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 183
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 57

Conread position: 77-345
Cow position: chr21:22210342-22210071 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 130, 54

Conread position: 79-266
Cow position: chr21:5985414-5985222 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 52, 97

Conread position: 79-296
Cow position: chr21:38664542-38664765 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 99, 46

Conread position: 79-315
Cow position: chr21:6017520-6017770 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 172
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 81-274
Cow position: chr21:8527571-8527380 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 50, 77

Conread position: 83-349
Cow position: chr21:6997846-6998127 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 201
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 113, 0

Conread position: 91-307
Cow position: chr21:9036211-9036438 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 91-313
Cow position: chr21:41107846-41107625 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 29, 35

Conread position: 93-280
Cow position: chr21:37014485-37014296 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 115, 37

Conread position: 93-300
Cow position: chr21:10858734-10858937 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 38, 103

Conread position: 93-340
Cow position: chr21:47363826-47363563 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 6

Conread position: 94-345
Cow position: chr21:30256350-30256098 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 181
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 11

Conread position: 96-343
Cow position: chr21:7823298-7823538 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 185
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 136, 82

Conread position: 96-349
Cow position: chr21:10410139-10410402 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 189
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 100, 141

Conread position: 98-345
Cow position: chr21:45262889-45262634 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 27

Conread position: 99-303
Cow position: chr21:33360110-33359909 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 97, 31

Conread position: 99-345
Cow position: chr21:46552182-46551926 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 106, 32

Conread position: 99-349
Cow position: chr21:36909858-36910111 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 110, 31

Conread position: 103-341
Cow position: chr21:1511219-1511461 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 86, 26

Conread position: 103-345
Cow position: chr21:15544290-15544053 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 174
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 103, 22

Conread position: 103-349
Cow position: chr21:40266049-40266301 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 181
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 28, 154

Conread position: 108-299
Cow position: chr21:17929909-17929708 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 0

Conread position: 110-346
Cow position: chr21:41140783-41140540 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 22

Conread position: 116-343
Cow position: chr21:11779589-11779368 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 91, 15

Conread position: 118-345
Cow position: chr21:868984-868748 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 90, 71

Conread position: 121-345
Cow position: chr21:977200-976965 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 18

Conread position: 121-347
Cow position: chr21:17890247-17890480 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 125-349
Cow position: chr21:28919576-28919348 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 71, 185

Conread position: 130-338
Cow position: chr21:21907476-21907265 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 78, 116

Conread position: 130-349
Cow position: chr21:5464700-5464922 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 124

Conread position: 143-348
Cow position: chr21:734562-734768 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 65, 106

Conread position: 143-349
Cow position: chr21:13395564-13395778 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 23

Conread position: 151-345
Cow position: chr21:38720226-38720424 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 54, 77

Conread position: 151-349
Cow position: chr21:37838087-37837886 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 36, 47

Conread position: 152-343
Cow position: chr21:40192326-40192131 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 24, 31

Conread position: 203-349
Cow position: chr21:7583883-7584030 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 107, 121

Show alignments to all cow chromosomes.