• Home
• Research
• Resources
• Publications
• About
• People
• Events
• Jobs
• News
• Contact

Cow genome map

           
Conread name:
           
rpigcf0_018626.y1
        

               
Conread position:
               
1-156
               

               
Cow position:
               
chr22:13720766-13720611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
52, 130
               

               
Conread position:
               
1-172
               

               
Cow position:
               
chr22:2141573-2141743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr22:2105498-2105319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
91, 135
               

               
Conread position:
               
1-191
               

               
Cow position:
               
chr22:8303089-8302905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr22:11987458-11987266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 132
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr22:44386639-44386456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr22:19376469-19376660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
72, 61
               

               
Conread position:
               
1-201
               

               
Cow position:
               
chr22:14601273-14601461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:3730880-3730677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
86, 135
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr22:30689390-30689593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr22:8767101-8767306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
88, 43
               

               
Conread position:
               
1-210
               

               
Cow position:
               
chr22:2010558-2010765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr22:30472805-30473016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
200, 90
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr22:11500541-11500778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr22:25341779-25342015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 129
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr22:5042078-5042323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr22:26749291-26749035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
1-262
               

               
Cow position:
               
chr22:11257977-11257718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
52, 125
               

               
Conread position:
               
1-266
               

               
Cow position:
               
chr22:41045155-41044879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
123, 78
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr22:41271232-41270969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr22:8283740-8284022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
130, 49
               

               
Conread position:
               
1-278
               

               
Cow position:
               
chr22:15960012-15959727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
79, 43
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr22:15919876-15919582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
78, 108
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr22:11813958-11813661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
124, 75
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr22:6710016-6709728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr22:10983102-10983413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
11, 129
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr22:12800433-12800734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
126, 36
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr22:14143347-14143051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr22:38313705-38313414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 86
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:4988800-4988496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
77, 128
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr22:13957891-13957580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr22:16812404-16812094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 177
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:34398696-34398383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 79
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr22:28146443-28146750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 195
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr22:30963890-30964203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
108, 74
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr22:1975371-1975696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 124
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr22:15090499-15090839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 130
               

               
Conread position:
               
1-337
               

               
Cow position:
               
chr22:14638706-14638377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
177, 59
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr22:31194831-31195157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
1-339
               

               
Cow position:
               
chr22:2095308-2095656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
80, 66
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr22:7851718-7852072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr22:17813987-17814340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 72
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:645002-644661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 93
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:3964944-3965295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 95
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:5282266-5282606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 83
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:7164712-7165072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:8116323-8115979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
204, 69
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:23854740-23855079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:28665028-28665392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 145
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:32326560-32326908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
80, 52
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:34750436-34750782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 125
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr22:38940190-38939832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 130
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr22:8412283-8412638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr22:8481406-8481753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
197, 89
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr22:23833055-23833406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr22:26658814-26659152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 128
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr22:7081784-7082138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
80, 134
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr22:17950198-17949860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 78
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr22:24611317-24610982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 72
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr22:27818762-27819112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
130, 83
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr22:33448316-33447969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 69
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:534252-534612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:1279627-1279272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:3301563-3301226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
105, 11
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:4017234-4017586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
86, 126
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:4563121-4563476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
183, 106
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:6215795-6215443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
196, 53
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:6600927-6600569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
93, 135
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:9372279-9372634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 13
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:10122147-10122492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
80, 127
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:10920105-10919742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
82, 327
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:12682033-12681687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
177, 26
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:14924965-14924619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 34
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:15490418-15490767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 114
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:16620932-16621294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 86
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:23176692-23176328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 190
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:23759253-23758899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:23806788-23806428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 129
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:23856807-23857160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:24176115-24175783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:25943240-25943588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 75
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:30049814-30049453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:31646253-31646604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
195, 86
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:34616068-34616419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
150, 70
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:34712473-34712838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:35161562-35161237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
63, 55
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:37201616-37201961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 40
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:37324306-37324650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 26
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr22:40374365-40374720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 123
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr22:41417378-41417214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
2-195
               

               
Cow position:
               
chr22:27512402-27512213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr22:4645537-4645836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
204, 74
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr22:33485843-33485556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
78, 40
               

               
Conread position:
               
2-327
               

               
Cow position:
               
chr22:26339520-26339844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 77
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr22:6328004-6327654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
3-180
               

               
Cow position:
               
chr22:30583251-30583428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
94, 124
               

               
Conread position:
               
3-183
               

               
Cow position:
               
chr22:14005913-14006091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
163, 36
               

               
Conread position:
               
3-195
               

               
Cow position:
               
chr22:33949241-33949048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
78, 54
               

               
Conread position:
               
3-210
               

               
Cow position:
               
chr22:3541957-3541756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 28
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr22:32952239-32952471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
174, 97
               

               
Conread position:
               
3-262
               

               
Cow position:
               
chr22:766518-766264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr22:44740864-44741139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
3-324
               

               
Cow position:
               
chr22:21415396-21415708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
83, 34
               

               
Conread position:
               
3-330
               

               
Cow position:
               
chr22:43292140-43291809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
3-337
               

               
Cow position:
               
chr22:12946404-12946082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 76
               

               
Conread position:
               
3-338
               

               
Cow position:
               
chr22:4583332-4583663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
109, 37
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:5337837-5337491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 105
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:16532841-16533181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 108
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr22:47555606-47555957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
103, 11
               

               
Conread position:
               
3-346
               

               
Cow position:
               
chr22:37139208-37139545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
128, 35
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr22:13670409-13670058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
131, 87
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr22:44180354-44180705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 91
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr22:4119807-4119449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
75, 125
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr22:13286205-13286562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 127
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr22:25743192-25742836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 134
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr22:30483673-30484028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 127
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr22:40121117-40120768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 162
               

               
Conread position:
               
4-174
               

               
Cow position:
               
chr22:36208701-36208867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
60, 65
               

               
Conread position:
               
4-184
               

               
Cow position:
               
chr22:1710336-1710513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
127, 87
               

               
Conread position:
               
4-195
               

               
Cow position:
               
chr22:19848634-19848444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
90, 36
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr22:2403634-2403843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr22:22054178-22054388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
4-233
               

               
Cow position:
               
chr22:1822113-1821875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr22:35533594-35533342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
174, 48
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr22:6123134-6122877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
200, 71
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr22:26097852-26097559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
9e-28
               

               
Alignm gaps (pig, cow):
               
186, 64
               

               
Conread position:
               
4-298
               

               
Cow position:
               
chr22:27322080-27322375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
34, 82
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr22:845664-845966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 119
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr22:911864-912161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
198, 75
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr22:4994160-4993847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr22:37067036-37066739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
77, 194
               

               
Conread position:
               
4-313
               

               
Cow position:
               
chr22:38439396-38439081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
76, 125
               

               
Conread position:
               
4-318
               

               
Cow position:
               
chr22:40720526-40720214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
4-326
               

               
Cow position:
               
chr22:22160482-22160815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 124
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr22:6622484-6622147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 121
               

               
Conread position:
               
4-338
               

               
Cow position:
               
chr22:8733560-8733235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
211, 10
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr22:23181273-23180937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
190, 10
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:10339351-10339010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 121
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:13840899-13841248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 86
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:14179070-14178718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 127
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:23827072-23827413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
194, 59
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:25222140-25221791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:25476825-25477155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 121
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:32894965-32895327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 135
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr22:37029841-37029499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
34, 125
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr22:590104-590449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
208, 49
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr22:22612874-22613215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
185, 83
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr22:27329122-27328782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 75
               

               
Conread position:
               
4-347
               

               
Cow position:
               
chr22:877284-877627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 31
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr22:1309966-1309622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
202, 121
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr22:3950003-3950364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 287
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr22:5290605-5290962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 61
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr22:14691214-14690859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr22:25246671-25247024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 162
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr22:26141034-26141386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:2502599-2502939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
324, 75
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:2627339-2627693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 23
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:11130633-11130983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 67
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:16044667-16044303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:21502497-21502857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
42, 129
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:22155362-22155716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
81, 73
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:22222954-22223299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 90
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:32189077-32188741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
184, 67
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:38977611-38977954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
174, 66
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr22:45513759-45513416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
102, 80
               

               
Conread position:
               
5-206
               

               
Cow position:
               
chr22:34665814-34666009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
89, 52
               

               
Conread position:
               
5-211
               

               
Cow position:
               
chr22:6360725-6360521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
84, 74
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr22:45271344-45271592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr22:20862986-20862696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
126, 63
               

               
Conread position:
               
5-305
               

               
Cow position:
               
chr22:6610591-6610283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 141
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr22:16327268-16327569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
199, 74
               

               
Conread position:
               
5-343
               

               
Cow position:
               
chr22:19048042-19047709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
198, 46
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr22:28058280-28057941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 25
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr22:14371930-14372283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
95, 200
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr22:40386935-40387266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
201, 68
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr22:1326181-1326531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
74, 42
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr22:3253175-3252846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
206, 62
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr22:4535564-4535217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 131
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr22:18926114-18926469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr22:20626604-20626951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 120
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr22:34726435-34726778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 141
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr22:45132889-45132536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
121, 66
               

               
Conread position:
               
6-165
               

               
Cow position:
               
chr22:34986338-34986185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
6-298
               

               
Cow position:
               
chr22:29013641-29013941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 280
               

               
Conread position:
               
6-299
               

               
Cow position:
               
chr22:10631136-10631448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
6-300
               

               
Cow position:
               
chr22:19340963-19341263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
77, 241
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr22:9520911-9521218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
174, 8
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr22:4108975-4108655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 168
               

               
Conread position:
               
6-343
               

               
Cow position:
               
chr22:11458587-11458922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
34, 22
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:4990408-4990062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:12968306-12967960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 62
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:34606354-34606699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
125, 29
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr22:43397781-43398109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr22:8324009-8324346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
6-346
               

               
Cow position:
               
chr22:17295167-17294826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
88, 122
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr22:1266174-1265811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 6
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr22:29641874-29642222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 57
               

               
Conread position:
               
7-188
               

               
Cow position:
               
chr22:27700978-27701157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-37
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr22:19775661-19775371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
179, 84
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr22:21355380-21355078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
74, 125
               

               
Conread position:
               
7-300
               

               
Cow position:
               
chr22:41971392-41971091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
80, 64
               

               
Conread position:
               
7-324
               

               
Cow position:
               
chr22:24734548-24734231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
37, 91
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr22:25237376-25237033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 72
               

               
Conread position:
               
7-343
               

               
Cow position:
               
chr22:38980669-38980993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
189, 60
               

               
Conread position:
               
7-345
               

               
Cow position:
               
chr22:6493935-6494270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
93, 80
               

               
Conread position:
               
7-346
               

               
Cow position:
               
chr22:30515017-30515368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 118
               

               
Conread position:
               
7-348
               

               
Cow position:
               
chr22:22022651-22023013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
74, 168
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr22:21567764-21568105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
201, 46
               

               
Conread position:
               
7-349
               

               
Cow position:
               
chr22:26316238-26316569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
322, 72
               

               
Conread position:
               
8-345
               

               
Cow position:
               
chr22:18126970-18126626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
9-309
               

               
Cow position:
               
chr22:3908686-3909002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
85, 12
               

               
Conread position:
               
10-211
               

               
Cow position:
               
chr22:12974625-12974422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
69, 123
               

               
Conread position:
               
10-300
               

               
Cow position:
               
chr22:15153777-15154064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
168, 9
               

               
Conread position:
               
10-346
               

               
Cow position:
               
chr22:10685320-10684981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
168, 115
               

               
Conread position:
               
13-349
               

               
Cow position:
               
chr22:10532265-10532613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
67, 216
               

               
Conread position:
               
14-311
               

               
Cow position:
               
chr22:13300181-13300485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
77, 118
               

               
Conread position:
               
15-345
               

               
Cow position:
               
chr22:24628876-24628550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
5, 40
               

               
Conread position:
               
18-349
               

               
Cow position:
               
chr22:5616075-5616414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
20-344
               

               
Cow position:
               
chr22:22907973-22908294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
9e-38
               

               
Alignm gaps (pig, cow):
               
16, 10
               

               
Conread position:
               
21-348
               

               
Cow position:
               
chr22:6149607-6149279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 115
               

               
Conread position:
               
22-300
               

               
Cow position:
               
chr22:15068205-15068490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
23-164
               

               
Cow position:
               
chr22:17339982-17339844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
24-212
               

               
Cow position:
               
chr22:3944956-3945144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
28-311
               

               
Cow position:
               
chr22:13849664-13849379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
28-343
               

               
Cow position:
               
chr22:3533734-3534040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
178, 14
               

               
Conread position:
               
30-249
               

               
Cow position:
               
chr22:10362842-10363080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
58, 215
               

               
Conread position:
               
31-256
               

               
Cow position:
               
chr22:4974631-4974404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
165, 45
               

               
Conread position:
               
32-297
               

               
Cow position:
               
chr22:10598187-10598445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
48, 94
               

               
Conread position:
               
34-235
               

               
Cow position:
               
chr22:18219102-18218891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
36, 63
               

               
Conread position:
               
34-275
               

               
Cow position:
               
chr22:30471896-30471655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
75, 60
               

               
Conread position:
               
34-338
               

               
Cow position:
               
chr22:17125374-17125684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
88, 66
               

               
Conread position:
               
34-346
               

               
Cow position:
               
chr22:41829438-41829133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
48, 68
               

               
Conread position:
               
37-312
               

               
Cow position:
               
chr22:8429677-8429962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
37-345
               

               
Cow position:
               
chr22:46568094-46567785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
69, 42
               

               
Conread position:
               
37-349
               

               
Cow position:
               
chr22:41853691-41854020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
38-192
               

               
Cow position:
               
chr22:11200833-11200984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
39-311
               

               
Cow position:
               
chr22:3269682-3269414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
42, 80
               

               
Conread position:
               
39-312
               

               
Cow position:
               
chr22:23689410-23689129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
21, 151
               

               
Conread position:
               
40-345
               

               
Cow position:
               
chr22:27274895-27274591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 83
               

               
Conread position:
               
41-345
               

               
Cow position:
               
chr22:14378885-14378587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
43-345
               

               
Cow position:
               
chr22:2523763-2524072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
42, 67
               

               
Conread position:
               
44-313
               

               
Cow position:
               
chr22:10420833-10421108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
169, 81
               

               
Conread position:
               
46-291
               

               
Cow position:
               
chr22:10678181-10677937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
43, 80
               

               
Conread position:
               
46-347
               

               
Cow position:
               
chr22:21530547-21530248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
171, 58
               

               
Conread position:
               
46-349
               

               
Cow position:
               
chr22:12315615-12315923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 84
               

               
Conread position:
               
47-209
               

               
Cow position:
               
chr22:7252843-7252677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
34, 84
               

               
Conread position:
               
47-345
               

               
Cow position:
               
chr22:1848869-1849183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
47-349
               

               
Cow position:
               
chr22:23122221-23121889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
50-349
               

               
Cow position:
               
chr22:34618611-34618911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
51-294
               

               
Cow position:
               
chr22:19173511-19173753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 19
               

               
Conread position:
               
56-312
               

               
Cow position:
               
chr22:17259336-17259092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
75, 37
               

               
Conread position:
               
56-334
               

               
Cow position:
               
chr22:16292107-16291827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
57-345
               

               
Cow position:
               
chr22:1540717-1541008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 156
               

               
Conread position:
               
58-345
               

               
Cow position:
               
chr22:21205161-21205430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
31, 68
               

               
Conread position:
               
63-348
               

               
Cow position:
               
chr22:12388913-12389211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 11
               

               
Conread position:
               
67-299
               

               
Cow position:
               
chr22:16822928-16823162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
129, 58
               

               
Conread position:
               
67-312
               

               
Cow position:
               
chr22:17132585-17132335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
64, 83
               

               
Conread position:
               
68-341
               

               
Cow position:
               
chr22:9283772-9283494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
133, 47
               

               
Conread position:
               
70-345
               

               
Cow position:
               
chr22:8090701-8090423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
21, 56
               

               
Conread position:
               
71-349
               

               
Cow position:
               
chr22:43131721-43131445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
72-343
               

               
Cow position:
               
chr22:27740718-27740997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
19, 181
               

               
Conread position:
               
76-249
               

               
Cow position:
               
chr22:12598921-12599099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
82, 53
               

               
Conread position:
               
76-349
               

               
Cow position:
               
chr22:4157241-4156969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
128, 56
               

               
Conread position:
               
79-300
               

               
Cow position:
               
chr22:3241859-3241640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-26
               

               
Alignm gaps (pig, cow):
               
126, 11
               

               
Conread position:
               
79-307
               

               
Cow position:
               
chr22:9544541-9544320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
79-345
               

               
Cow position:
               
chr22:26969619-26969898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
129, 110
               

               
Conread position:
               
81-312
               

               
Cow position:
               
chr22:8709190-8708967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
51, 75
               

               
Conread position:
               
81-348
               

               
Cow position:
               
chr22:2912743-2912477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
125, 50
               

               
Conread position:
               
81-349
               

               
Cow position:
               
chr22:40789409-40789678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
103, 9
               

               
Conread position:
               
82-345
               

               
Cow position:
               
chr22:12929433-12929172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
127, 28
               

               
Conread position:
               
83-347
               

               
Cow position:
               
chr22:15618455-15618715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
251, 117
               

               
Conread position:
               
85-344
               

               
Cow position:
               
chr22:45845989-45846249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 40
               

               
Conread position:
               
91-275
               

               
Cow position:
               
chr22:22553386-22553202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 41
               

               
Conread position:
               
91-345
               

               
Cow position:
               
chr22:15020553-15020304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
37, 163
               

               
Conread position:
               
95-235
               

               
Cow position:
               
chr22:16917352-16917213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 108
               

               
Conread position:
               
95-345
               

               
Cow position:
               
chr22:1035965-1035703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
95, 37
               

               
Conread position:
               
95-347
               

               
Cow position:
               
chr22:20475422-20475171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
242, 37
               

               
Conread position:
               
96-300
               

               
Cow position:
               
chr22:27835384-27835596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
100, 93
               

               
Conread position:
               
99-345
               

               
Cow position:
               
chr22:11767193-11766941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
101-300
               

               
Cow position:
               
chr22:21325875-21325670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 87
               

               
Conread position:
               
105-345
               

               
Cow position:
               
chr22:27681578-27681830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
81, 20
               

               
Conread position:
               
118-345
               

               
Cow position:
               
chr22:27828259-27828487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
119-312
               

               
Cow position:
               
chr22:2123169-2123367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
12, 57
               

               
Conread position:
               
124-298
               

               
Cow position:
               
chr22:26422032-26421860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
127-345
               

               
Cow position:
               
chr22:14509581-14509368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
208, 12
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr22:6852697-6852471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
78, 134
               

               
Conread position:
               
130-349
               

               
Cow position:
               
chr22:12829725-12829498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 191
               

               
Conread position:
               
131-344
               

               
Cow position:
               
chr22:1911557-1911773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr22:23751006-23750784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
32, 11
               

               
Conread position:
               
132-349
               

               
Cow position:
               
chr22:23736123-23735902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
133-345
               

               
Cow position:
               
chr22:43237518-43237299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
135-293
               

               
Cow position:
               
chr22:14835328-14835170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 81
               

               
Conread position:
               
149-345
               

               
Cow position:
               
chr22:24915742-24915946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
151-347
               

               
Cow position:
               
chr22:28704095-28704295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
157-349
               

               
Cow position:
               
chr22:12678507-12678309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
159-349
               

               
Cow position:
               
chr22:10553770-10553572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
199-343
               

               
Cow position:
               
chr22:4156852-4156710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
129, 13
               

               
Conread position:
               
207-349
               

               
Cow position:
               
chr22:23398435-23398291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               
Show alignments to all cow chromosomes.