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Cow genome map

           
Conread name:
           
rpigcf0_018626.y1
        

               
Conread position:
               
1-156
               

               
Cow position:
               
chr27:9978021-9977857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 90
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr27:22498747-22498560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
24, 32
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr27:22220748-22220558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
79, 125
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr27:22771952-22771752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 191
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr27:1498508-1498305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
1-209
               

               
Cow position:
               
chr27:18030865-18031078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr27:910890-911098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
181, 86
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr27:19685520-19685725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-231
               

               
Cow position:
               
chr27:27449240-27449468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
110, 73
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr27:9090607-9090850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:8291817-8292060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
130, 78
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:21569649-21569909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 113
               

               
Conread position:
               
1-259
               

               
Cow position:
               
chr27:30362437-30362177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
1-297
               

               
Cow position:
               
chr27:11273764-11273469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 87
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr27:815559-815252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
204, 69
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr27:21668931-21669227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
130, 17
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr27:23930159-23929857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
205, 78
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr27:26218893-26218592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
195, 57
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr27:28018531-28018228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 118
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr27:25380185-25379877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 96
               

               
Conread position:
               
1-303
               

               
Cow position:
               
chr27:30890481-30890178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
76, 41
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr27:13409974-13410281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
41, 136
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:1123216-1122911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:8629680-8629991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
80, 31
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr27:26239218-26238904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
175, 32
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:6500259-6499939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:11296452-11296148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
200, 86
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:11815565-11815869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 149
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:15871356-15871039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 68
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr27:21408358-21408685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-324
               

               
Cow position:
               
chr27:26807369-26807699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
204, 128
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr27:26427934-26428276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr27:19589673-19589324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr27:19661137-19660778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 76
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr27:20553911-20553578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 98
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr27:18544192-18543834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
132, 93
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr27:19543715-19544075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr27:22723512-22723848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 89
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:6550645-6550308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 89
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:7934969-7935313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:7958641-7958984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 70
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:8062164-8062505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 10
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:10582557-10582217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
210, 100
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:12246854-12246498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:15925529-15925190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:18507826-18507494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
108, 82
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:18558558-18558205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 114
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:20354774-20354446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 67
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:21977943-21978294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
131, 78
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:28001624-28001967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 37
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr27:28931593-28931957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr27:4390060-4390414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
88, 127
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr27:26999230-26999578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
166, 69
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr27:12516393-12516035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 191
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr27:15204037-15204388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
82, 135
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr27:16787021-16786672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
93, 127
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr27:23554125-23554485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 230
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:7412577-7412233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
80, 169
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:10980058-10979703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
80, 133
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:15867585-15867230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 54
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:22179603-22179926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
327, 89
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:23882180-23882527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 39
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:24227599-24227959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 107
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:26300033-26299681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
57, 46
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:26919718-26920072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
129, 68
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:30765226-30764876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 78
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr27:30915196-30914850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 78
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr27:2682950-2683237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
121, 94
               

               
Conread position:
               
2-295
               

               
Cow position:
               
chr27:22547211-22547501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr27:29038747-29039049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 93
               

               
Conread position:
               
2-345
               

               
Cow position:
               
chr27:1353778-1353427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 55
               

               
Conread position:
               
3-184
               

               
Cow position:
               
chr27:29400010-29399828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
54, 14
               

               
Conread position:
               
3-256
               

               
Cow position:
               
chr27:14902456-14902719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 110
               

               
Conread position:
               
3-259
               

               
Cow position:
               
chr27:6523238-6522975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 76
               

               
Conread position:
               
3-296
               

               
Cow position:
               
chr27:8962077-8962363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
202, 54
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr27:18739580-18739267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
119, 132
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr27:19388209-19387909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr27:27632417-27632710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
3-334
               

               
Cow position:
               
chr27:27388836-27389167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
224, 73
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr27:4385874-4386217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 76
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr27:10307103-10307453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
60, 95
               

               
Conread position:
               
3-348
               

               
Cow position:
               
chr27:22440332-22439982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
75, 124
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr27:16705439-16705091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 128
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr27:27003089-27003418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
199, 67
               

               
Conread position:
               
4-212
               

               
Cow position:
               
chr27:26424395-26424600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 23
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr27:22330478-22330719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
139, 67
               

               
Conread position:
               
4-236
               

               
Cow position:
               
chr27:26398067-26398304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
4-246
               

               
Cow position:
               
chr27:27259800-27259558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 126
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr27:707139-706873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
202, 54
               

               
Conread position:
               
4-267
               

               
Cow position:
               
chr27:23070168-23070436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
75, 120
               

               
Conread position:
               
4-292
               

               
Cow position:
               
chr27:23128646-23128358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
127, 54
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr27:12429600-12429297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 180
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr27:26857020-26857294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
127, 16
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr27:29977450-29977141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
28, 140
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr27:16284664-16284354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr27:13841566-13841247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
4-325
               

               
Cow position:
               
chr27:20283823-20283501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
199, 58
               

               
Conread position:
               
4-334
               

               
Cow position:
               
chr27:24014549-24014883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
192, 121
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr27:2592733-2592386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 56
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr27:21393312-21393663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr27:15866415-15866062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 260
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr27:25277328-25276986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 72
               

               
Conread position:
               
4-346
               

               
Cow position:
               
chr27:28921705-28922050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 133
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr27:27554495-27554836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
192, 38
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr27:28518477-28518137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 81
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr27:25809331-25809675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 63
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr27:26413064-26413414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 83
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr27:27038652-27038997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
173, 64
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr27:27640800-27641170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 310
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr27:30406840-30407196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
92, 127
               

               
Conread position:
               
5-209
               

               
Cow position:
               
chr27:28164221-28164419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
173, 39
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr27:14670190-14670490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
5-308
               

               
Cow position:
               
chr27:11081386-11081083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
5-326
               

               
Cow position:
               
chr27:30868549-30868876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 9
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr27:8942493-8942845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 99
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr27:22454590-22454932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 86
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr27:30988989-30988638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 122
               

               
Conread position:
               
6-209
               

               
Cow position:
               
chr27:23454953-23455167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
6-295
               

               
Cow position:
               
chr27:23576351-23576643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
200, 88
               

               
Conread position:
               
6-307
               

               
Cow position:
               
chr27:22426638-22426949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
15, 188
               

               
Conread position:
               
6-326
               

               
Cow position:
               
chr27:18593460-18593137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 123
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr27:15315683-15315363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
249, 70
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr27:22418575-22418922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 110
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr27:12596948-12596617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 42
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr27:17397257-17397614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
7-194
               

               
Cow position:
               
chr27:24027160-24026977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
41, 84
               

               
Conread position:
               
7-236
               

               
Cow position:
               
chr27:29283220-29283454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 123
               

               
Conread position:
               
7-340
               

               
Cow position:
               
chr27:20636892-20637210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
190, 42
               

               
Conread position:
               
8-299
               

               
Cow position:
               
chr27:4858462-4858748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
36, 6
               

               
Conread position:
               
8-337
               

               
Cow position:
               
chr27:29831500-29831846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
10-348
               

               
Cow position:
               
chr27:13252195-13251857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
71, 109
               

               
Conread position:
               
13-246
               

               
Cow position:
               
chr27:27550565-27550790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
15-340
               

               
Cow position:
               
chr27:11435148-11435471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
169, 53
               

               
Conread position:
               
16-346
               

               
Cow position:
               
chr27:1290684-1291006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
12, 75
               

               
Conread position:
               
17-159
               

               
Cow position:
               
chr27:20803622-20803480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
114, 97
               

               
Conread position:
               
22-343
               

               
Cow position:
               
chr27:9169471-9169792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
174, 109
               

               
Conread position:
               
23-210
               

               
Cow position:
               
chr27:24357438-24357245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
27-312
               

               
Cow position:
               
chr27:29184674-29184959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 28
               

               
Conread position:
               
28-171
               

               
Cow position:
               
chr27:28008891-28009035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
106, 10
               

               
Conread position:
               
28-212
               

               
Cow position:
               
chr27:26906729-26906915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
28-310
               

               
Cow position:
               
chr27:15643343-15643055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 106
               

               
Conread position:
               
28-344
               

               
Cow position:
               
chr27:20748858-20749165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
31-345
               

               
Cow position:
               
chr27:24477581-24477261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 98
               

               
Conread position:
               
32-311
               

               
Cow position:
               
chr27:4944365-4944635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
165, 47
               

               
Conread position:
               
32-348
               

               
Cow position:
               
chr27:27438341-27438664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
93, 185
               

               
Conread position:
               
33-349
               

               
Cow position:
               
chr27:30871897-30872216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 92
               

               
Conread position:
               
35-349
               

               
Cow position:
               
chr27:3306936-3306615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
12, 85
               

               
Conread position:
               
36-346
               

               
Cow position:
               
chr27:16781024-16780713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
165, 58
               

               
Conread position:
               
40-236
               

               
Cow position:
               
chr27:29905758-29905566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
72, 47
               

               
Conread position:
               
40-301
               

               
Cow position:
               
chr27:23891093-23890827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
41-312
               

               
Cow position:
               
chr27:22513520-22513799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 141
               

               
Conread position:
               
42-326
               

               
Cow position:
               
chr27:7731095-7731393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
43-348
               

               
Cow position:
               
chr27:28270994-28271309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
90, 235
               

               
Conread position:
               
46-345
               

               
Cow position:
               
chr27:7649433-7649738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
18, 100
               

               
Conread position:
               
46-348
               

               
Cow position:
               
chr27:26489752-26490067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
29, 81
               

               
Conread position:
               
47-334
               

               
Cow position:
               
chr27:715652-715357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 79
               

               
Conread position:
               
52-348
               

               
Cow position:
               
chr27:26481074-26481352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
276, 19
               

               
Conread position:
               
68-204
               

               
Cow position:
               
chr27:10395134-10395266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
68-246
               

               
Cow position:
               
chr27:4011806-4011623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
68-348
               

               
Cow position:
               
chr27:8168302-8168589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 62
               

               
Conread position:
               
69-194
               

               
Cow position:
               
chr27:26141898-26141774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
71-300
               

               
Cow position:
               
chr27:11151797-11151559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 13
               

               
Conread position:
               
72-345
               

               
Cow position:
               
chr27:27442047-27442320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
59, 232
               

               
Conread position:
               
77-349
               

               
Cow position:
               
chr27:16965708-16965417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 130
               

               
Conread position:
               
80-300
               

               
Cow position:
               
chr27:11160111-11159898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 28
               

               
Conread position:
               
80-312
               

               
Cow position:
               
chr27:20078982-20078746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
51, 196
               

               
Conread position:
               
80-348
               

               
Cow position:
               
chr27:30260780-30261051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
116, 10
               

               
Conread position:
               
81-246
               

               
Cow position:
               
chr27:6350715-6350896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
58, 99
               

               
Conread position:
               
81-307
               

               
Cow position:
               
chr27:30672449-30672675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
132, 50
               

               
Conread position:
               
86-349
               

               
Cow position:
               
chr27:29380967-29380695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
94-334
               

               
Cow position:
               
chr27:20497315-20497062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
37, 31
               

               
Conread position:
               
94-349
               

               
Cow position:
               
chr27:12191388-12191639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
242, 36
               

               
Conread position:
               
94-349
               

               
Cow position:
               
chr27:23594417-23594162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
95-246
               

               
Cow position:
               
chr27:20570222-20570064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
95-349
               

               
Cow position:
               
chr27:8263235-8263498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
36, 5
               

               
Conread position:
               
98-345
               

               
Cow position:
               
chr27:31148858-31148606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 27
               

               
Conread position:
               
99-341
               

               
Cow position:
               
chr27:23736058-23735816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
97, 165
               

               
Conread position:
               
99-349
               

               
Cow position:
               
chr27:22559725-22559983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 173
               

               
Conread position:
               
100-345
               

               
Cow position:
               
chr27:673949-674186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
158, 30
               

               
Conread position:
               
117-349
               

               
Cow position:
               
chr27:6925167-6924925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
79, 8
               

               
Conread position:
               
121-348
               

               
Cow position:
               
chr27:16088885-16088646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
75, 219
               

               
Conread position:
               
126-309
               

               
Cow position:
               
chr27:21976120-21975934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
82, 63
               

               
Conread position:
               
126-349
               

               
Cow position:
               
chr27:31017764-31017985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
80, 5
               

               
Conread position:
               
130-325
               

               
Cow position:
               
chr27:22225528-22225727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
65, 89
               

               
Conread position:
               
130-345
               

               
Cow position:
               
chr27:20514888-20514667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 140
               

               
Conread position:
               
130-348
               

               
Cow position:
               
chr27:26111842-26112074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
131-349
               

               
Cow position:
               
chr27:7974240-7974017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
75, 115
               

               
Conread position:
               
135-345
               

               
Cow position:
               
chr27:20812967-20812749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 41
               

               
Conread position:
               
152-348
               

               
Cow position:
               
chr27:26852547-26852738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 87
               

               
Conread position:
               
152-349
               

               
Cow position:
               
chr27:5553510-5553310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 112
               

               
Conread position:
               
155-345
               

               
Cow position:
               
chr27:17918273-17918469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
157-345
               

               
Cow position:
               
chr27:31386602-31386787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 26
               

               
Conread position:
               
161-349
               

               
Cow position:
               
chr27:14303770-14303578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 105
               

               
Conread position:
               
198-349
               

               
Cow position:
               
chr27:27673022-27673175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
210-344
               

               
Cow position:
               
chr27:29319391-29319257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-349
               

               
Cow position:
               
chr27:18435157-18435293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
114, 0
               
Show alignments to all cow chromosomes.