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Cow genome map

           
Conread name:
           
rpigcf0_018626.y1
        

               
Conread position:
               
1-171
               

               
Cow position:
               
chr5:24642934-24642770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
1-177
               

               
Cow position:
               
chr5:40928185-40928013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr5:37064881-37065062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
80, 126
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr5:23856374-23856183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
124, 84
               

               
Conread position:
               
1-200
               

               
Cow position:
               
chr5:2332726-2332524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
92, 111
               

               
Conread position:
               
1-203
               

               
Cow position:
               
chr5:28324133-28324343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
1-204
               

               
Cow position:
               
chr5:57271478-57271276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
1-208
               

               
Cow position:
               
chr5:60519954-60520155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr5:14420557-14420347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
73, 160
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr5:29680866-29681077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
96, 58
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr5:35145140-35145345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr5:16184877-16185102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
202, 72
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr5:50950341-50950579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
66, 125
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr5:43474635-43474871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 124
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr5:49820930-49821167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 69
               

               
Conread position:
               
1-236
               

               
Cow position:
               
chr5:56135181-56134936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
195, 150
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr5:26377879-26377632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
195, 124
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr5:54064567-54064814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
174, 80
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr5:2288771-2288511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:51490966-51490723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 35
               

               
Conread position:
               
1-265
               

               
Cow position:
               
chr5:35235921-35235652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 128
               

               
Conread position:
               
1-267
               

               
Cow position:
               
chr5:28927805-28927526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 132
               

               
Conread position:
               
1-269
               

               
Cow position:
               
chr5:32378657-32378907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr5:62826965-62826698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
215, 9
               

               
Conread position:
               
1-275
               

               
Cow position:
               
chr5:27154810-27155083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 72
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr5:28926397-28926108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
1-280
               

               
Cow position:
               
chr5:32140919-32140636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
177, 41
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr5:56820472-56820188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 40
               

               
Conread position:
               
1-287
               

               
Cow position:
               
chr5:13691788-13691488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
1-291
               

               
Cow position:
               
chr5:34638673-34638967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
211, 84
               

               
Conread position:
               
1-292
               

               
Cow position:
               
chr5:3491989-3492264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
1-295
               

               
Cow position:
               
chr5:15598446-15598148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
93, 125
               

               
Conread position:
               
1-298
               

               
Cow position:
               
chr5:8024404-8024110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
205, 23
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr5:5938112-5938413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 164
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:3242686-3242389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
234, 91
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:3281619-3281927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
52, 46
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:5111289-5110982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
80, 110
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:29903734-29903431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 39
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:40889496-40889205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 160
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:61600200-61600499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 191
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:64321536-64321846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:65601248-65601549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
1-300
               

               
Cow position:
               
chr5:73080000-73080297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
190, 40
               

               
Conread position:
               
1-301
               

               
Cow position:
               
chr5:61656394-61656682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
126, 149
               

               
Conread position:
               
1-302
               

               
Cow position:
               
chr5:45170150-45170452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
87, 147
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr5:68265176-68264859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
68, 198
               

               
Conread position:
               
1-307
               

               
Cow position:
               
chr5:71158476-71158182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
80, 109
               

               
Conread position:
               
1-308
               

               
Cow position:
               
chr5:23140785-23140489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
130, 89
               

               
Conread position:
               
1-309
               

               
Cow position:
               
chr5:28330544-28330242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
130, 82
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr5:4617161-4617469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
92, 86
               

               
Conread position:
               
1-311
               

               
Cow position:
               
chr5:57074547-57074228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
93, 125
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr5:4507173-4506861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
80, 191
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr5:34049897-34050222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr5:38853147-38853453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
88, 180
               

               
Conread position:
               
1-312
               

               
Cow position:
               
chr5:61576327-61576649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr5:31660853-31660543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
190, 76
               

               
Conread position:
               
1-322
               

               
Cow position:
               
chr5:39442080-39442411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
5, 119
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr5:32697025-32696705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 61
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr5:41129553-41129860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr5:58793827-58793489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 93
               

               
Conread position:
               
1-334
               

               
Cow position:
               
chr5:19813424-19813094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
1-335
               

               
Cow position:
               
chr5:24348899-24349234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 78
               

               
Conread position:
               
1-336
               

               
Cow position:
               
chr5:23647219-23646886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
205, 9
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr5:44848229-44847890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 65
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr5:56467488-56467820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 82
               

               
Conread position:
               
1-340
               

               
Cow position:
               
chr5:21040186-21039850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 70
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr5:27306106-27306439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
90, 126
               

               
Conread position:
               
1-342
               

               
Cow position:
               
chr5:60715567-60715233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 98
               

               
Conread position:
               
1-343
               

               
Cow position:
               
chr5:6528468-6528821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 131
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr5:37814411-37814763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
69, 99
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:18573958-18574311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 134
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:24996436-24996085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
80, 28
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:26990181-26990526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:35826378-35826739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
86, 137
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:37645861-37646219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
93, 102
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:37758016-37757701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
327, 67
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:39258325-39258643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
209, 29
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:41164876-41165226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 78
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:42777552-42777887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
337, 93
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:45226036-45225679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 44
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:55068504-55068844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 44
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:62172206-62172549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
197, 75
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:65752644-65752997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 129
               

               
Conread position:
               
1-345
               

               
Cow position:
               
chr5:65941466-65941113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 128
               

               
Conread position:
               
1-346
               

               
Cow position:
               
chr5:34442004-34441641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 92
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr5:3204623-3204967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr5:14550798-14550443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 135
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr5:16893988-16893631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 128
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr5:21828652-21829008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 130
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr5:30276479-30276831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
1-348
               

               
Cow position:
               
chr5:53055765-53055420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
130, 39
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:3771634-3771988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 89
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:4032201-4031844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 60
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:5257509-5257146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:6504092-6503739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 176
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:11229886-11229531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
72, 129
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:15478901-15479267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 172
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:16206355-16206013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
95, 28
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:16938220-16937887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
333, 59
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:34528349-34528688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 125
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:35969330-35969674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
327, 124
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:36855000-36855348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 75
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:36868533-36868877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 89
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:44796930-44796591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 9
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:49685493-49685135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 110
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:54311121-54311478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 34
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:54350573-54350219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 78
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:56070641-56071002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
93, 13
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:58519611-58519274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 43
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:60210352-60210001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
78, 174
               

               
Conread position:
               
1-349
               

               
Cow position:
               
chr5:67212166-67212502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 128
               

               
Conread position:
               
2-209
               

               
Cow position:
               
chr5:72150040-72150242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
201, 70
               

               
Conread position:
               
2-282
               

               
Cow position:
               
chr5:34885367-34885089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
208, 157
               

               
Conread position:
               
2-300
               

               
Cow position:
               
chr5:48828937-48829246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
41, 175
               

               
Conread position:
               
2-301
               

               
Cow position:
               
chr5:33080999-33080699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
199, 15
               

               
Conread position:
               
2-343
               

               
Cow position:
               
chr5:65933139-65932807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
2-344
               

               
Cow position:
               
chr5:29827842-29828183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 74
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr5:26094381-26094024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
2-349
               

               
Cow position:
               
chr5:65776597-65776242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
79, 127
               

               
Conread position:
               
3-172
               

               
Cow position:
               
chr5:15462504-15462672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
123, 28
               

               
Conread position:
               
3-192
               

               
Cow position:
               
chr5:69099319-69099509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr5:43395348-43395122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 45
               

               
Conread position:
               
3-269
               

               
Cow position:
               
chr5:40039981-40039709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
91, 123
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr5:21964083-21964354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
184, 16
               

               
Conread position:
               
3-273
               

               
Cow position:
               
chr5:58144814-58144538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 263
               

               
Conread position:
               
3-275
               

               
Cow position:
               
chr5:45940816-45940542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
203, 46
               

               
Conread position:
               
3-280
               

               
Cow position:
               
chr5:58229495-58229768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
125, 69
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr5:15722264-15721983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
3-299
               

               
Cow position:
               
chr5:34300716-34301003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
193, 55
               

               
Conread position:
               
3-300
               

               
Cow position:
               
chr5:31918444-31918734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 72
               

               
Conread position:
               
3-343
               

               
Cow position:
               
chr5:62142460-62142812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 128
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr5:20127844-20128191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 37
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr5:26262884-26262541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
3-345
               

               
Cow position:
               
chr5:37646761-37646406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 108
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr5:17999705-17999354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 273
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr5:39447741-39447390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 123
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr5:44054248-44053912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
78, 111
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr5:55756650-55756273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr5:57736904-57737241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 76
               

               
Conread position:
               
3-349
               

               
Cow position:
               
chr5:71494606-71494963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 171
               

               
Conread position:
               
4-204
               

               
Cow position:
               
chr5:14415563-14415762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
4-206
               

               
Cow position:
               
chr5:42667598-42667398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
122, 53
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr5:6575797-6575597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
4-209
               

               
Cow position:
               
chr5:55821158-55821368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
85, 9
               

               
Conread position:
               
4-211
               

               
Cow position:
               
chr5:32963839-32963635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 122
               

               
Conread position:
               
4-213
               

               
Cow position:
               
chr5:40357079-40356867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
4-243
               

               
Cow position:
               
chr5:44583328-44583097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
200, 69
               

               
Conread position:
               
4-244
               

               
Cow position:
               
chr5:45036812-45037050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
4-262
               

               
Cow position:
               
chr5:10261448-10261179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
4-264
               

               
Cow position:
               
chr5:50900696-50900954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
199, 59
               

               
Conread position:
               
4-279
               

               
Cow position:
               
chr5:30487038-30487313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
171, 16
               

               
Conread position:
               
4-282
               

               
Cow position:
               
chr5:72287121-72286841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
164, 75
               

               
Conread position:
               
4-293
               

               
Cow position:
               
chr5:31144985-31144702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
202, 26
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr5:29212739-29213029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
4-299
               

               
Cow position:
               
chr5:56523964-56524265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
77, 43
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr5:16508886-16509198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 40
               

               
Conread position:
               
4-300
               

               
Cow position:
               
chr5:51151572-51151262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
77, 177
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr5:14314312-14314631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-311
               

               
Cow position:
               
chr5:50821579-50821886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
197, 50
               

               
Conread position:
               
4-312
               

               
Cow position:
               
chr5:64137042-64137360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 172
               

               
Conread position:
               
4-343
               

               
Cow position:
               
chr5:58855894-58856238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 121
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr5:32394391-32394735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
69, 76
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr5:59326038-59325705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 73
               

               
Conread position:
               
4-344
               

               
Cow position:
               
chr5:67932671-67932335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr5:4710352-4710014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 39
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr5:9090233-9089890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr5:32975761-32975422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 90
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr5:43992116-43992462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 36
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr5:55176677-55177024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
73, 125
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr5:68604649-68604991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
179, 121
               

               
Conread position:
               
4-345
               

               
Cow position:
               
chr5:72564552-72564902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 90
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr5:30844901-30845249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
74, 124
               

               
Conread position:
               
4-348
               

               
Cow position:
               
chr5:65887224-65886870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
77, 176
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr5:11427451-11427093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 322
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr5:30253535-30253883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 28
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr5:44994247-44993907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
179, 121
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr5:52165392-52165037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr5:56028740-56028399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
4-349
               

               
Cow position:
               
chr5:74858364-74858717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
192, 121
               

               
Conread position:
               
5-194
               

               
Cow position:
               
chr5:47313265-47313455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
5-246
               

               
Cow position:
               
chr5:7140313-7140068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
134, 74
               

               
Conread position:
               
5-279
               

               
Cow position:
               
chr5:20554958-20554683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
83, 149
               

               
Conread position:
               
5-298
               

               
Cow position:
               
chr5:17027886-17028185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 123
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr5:18702421-18702128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
76, 161
               

               
Conread position:
               
5-302
               

               
Cow position:
               
chr5:46122559-46122259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
5-327
               

               
Cow position:
               
chr5:52645284-52644961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 85
               

               
Conread position:
               
5-334
               

               
Cow position:
               
chr5:64758972-64758641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 53
               

               
Conread position:
               
5-341
               

               
Cow position:
               
chr5:44752519-44752173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
179, 120
               

               
Conread position:
               
5-345
               

               
Cow position:
               
chr5:47696659-47696312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
66, 27
               

               
Conread position:
               
5-346
               

               
Cow position:
               
chr5:26097087-26097428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 73
               

               
Conread position:
               
5-347
               

               
Cow position:
               
chr5:47317178-47316833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 89
               

               
Conread position:
               
5-348
               

               
Cow position:
               
chr5:34463794-34463439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
55, 128
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr5:458273-458630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 296
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr5:4280255-4280590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 74
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr5:53855496-53855848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
121, 17
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr5:54875889-54875553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
122, 57
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr5:63987656-63987303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 63
               

               
Conread position:
               
5-349
               

               
Cow position:
               
chr5:69337620-69337962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
6-184
               

               
Cow position:
               
chr5:63917618-63917441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
88, 120
               

               
Conread position:
               
6-306
               

               
Cow position:
               
chr5:7044918-7044607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
6-307
               

               
Cow position:
               
chr5:61839981-61840287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 12
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr5:11668386-11668082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 79
               

               
Conread position:
               
6-311
               

               
Cow position:
               
chr5:43738159-43737860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 86
               

               
Conread position:
               
6-312
               

               
Cow position:
               
chr5:33414615-33414307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
95, 41
               

               
Conread position:
               
6-342
               

               
Cow position:
               
chr5:52000011-52000353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 123
               

               
Conread position:
               
6-345
               

               
Cow position:
               
chr5:71454802-71454474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 119
               

               
Conread position:
               
6-349
               

               
Cow position:
               
chr5:51053855-51053507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 119
               

               
Conread position:
               
7-278
               

               
Cow position:
               
chr5:56443067-56443345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
34, 131
               

               
Conread position:
               
7-298
               

               
Cow position:
               
chr5:9894332-9894033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
178, 46
               

               
Conread position:
               
7-312
               

               
Cow position:
               
chr5:59082402-59082090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
74, 174
               

               
Conread position:
               
7-337
               

               
Cow position:
               
chr5:42744587-42744909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
177, 46
               

               
Conread position:
               
8-249
               

               
Cow position:
               
chr5:8994771-8994524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 117
               

               
Conread position:
               
9-285
               

               
Cow position:
               
chr5:35449049-35449313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
169, 116
               

               
Conread position:
               
10-264
               

               
Cow position:
               
chr5:3281076-3280816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
7, 117
               

               
Conread position:
               
10-307
               

               
Cow position:
               
chr5:26370495-26370782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
121, 30
               

               
Conread position:
               
13-301
               

               
Cow position:
               
chr5:56518410-56518129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
14-300
               

               
Cow position:
               
chr5:20407866-20407586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
169, 111
               

               
Conread position:
               
17-246
               

               
Cow position:
               
chr5:62995649-62995885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
116, 24
               

               
Conread position:
               
18-209
               

               
Cow position:
               
chr5:39242383-39242204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
22-184
               

               
Cow position:
               
chr5:50870350-50870514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
59, 102
               

               
Conread position:
               
22-345
               

               
Cow position:
               
chr5:22643409-22643094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
87, 104
               

               
Conread position:
               
23-300
               

               
Cow position:
               
chr5:8163014-8162726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
23-346
               

               
Cow position:
               
chr5:4220790-4221117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 106
               

               
Conread position:
               
23-346
               

               
Cow position:
               
chr5:5855689-5855997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
181, 56
               

               
Conread position:
               
24-249
               

               
Cow position:
               
chr5:20344967-20345203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 141
               

               
Conread position:
               
27-236
               

               
Cow position:
               
chr5:17644842-17644626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
176, 104
               

               
Conread position:
               
27-269
               

               
Cow position:
               
chr5:1678213-1678453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
105, 43
               

               
Conread position:
               
27-346
               

               
Cow position:
               
chr5:29061111-29060796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
63, 134
               

               
Conread position:
               
29-346
               

               
Cow position:
               
chr5:46512951-46512631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 100
               

               
Conread position:
               
30-268
               

               
Cow position:
               
chr5:3639666-3639427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
10, 56
               

               
Conread position:
               
30-300
               

               
Cow position:
               
chr5:57591507-57591780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
30-349
               

               
Cow position:
               
chr5:37808848-37808521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 49
               

               
Conread position:
               
31-199
               

               
Cow position:
               
chr5:57576031-57576199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
50, 32
               

               
Conread position:
               
31-311
               

               
Cow position:
               
chr5:57575583-57575876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
50, 98
               

               
Conread position:
               
31-329
               

               
Cow position:
               
chr5:55928760-55929065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
114, 94
               

               
Conread position:
               
31-349
               

               
Cow position:
               
chr5:47323268-47323604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 80
               

               
Conread position:
               
32-298
               

               
Cow position:
               
chr5:54089856-54090126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
35-349
               

               
Cow position:
               
chr5:44028480-44028167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 91
               

               
Conread position:
               
36-274
               

               
Cow position:
               
chr5:28957794-28957548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
45, 145
               

               
Conread position:
               
36-326
               

               
Cow position:
               
chr5:6286604-6286315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
37-343
               

               
Cow position:
               
chr5:51935006-51935325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
43, 262
               

               
Conread position:
               
38-300
               

               
Cow position:
               
chr5:69520715-69520983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
43, 90
               

               
Conread position:
               
39-183
               

               
Cow position:
               
chr5:45026092-45025950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
40-300
               

               
Cow position:
               
chr5:1987443-1987707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
43, 74
               

               
Conread position:
               
43-312
               

               
Cow position:
               
chr5:30178681-30178400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
43-349
               

               
Cow position:
               
chr5:55955735-55956054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
38, 81
               

               
Conread position:
               
46-349
               

               
Cow position:
               
chr5:30950087-30949773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 83
               

               
Conread position:
               
47-345
               

               
Cow position:
               
chr5:1396459-1396737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
47-345
               

               
Cow position:
               
chr5:30629324-30629019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
153, 78
               

               
Conread position:
               
49-344
               

               
Cow position:
               
chr5:11540208-11539917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
147, 35
               

               
Conread position:
               
50-236
               

               
Cow position:
               
chr5:71579010-71579204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 76
               

               
Conread position:
               
52-194
               

               
Cow position:
               
chr5:64060455-64060316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
52-280
               

               
Cow position:
               
chr5:21920206-21920452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
29, 228
               

               
Conread position:
               
52-345
               

               
Cow position:
               
chr5:66972267-66972567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
52-349
               

               
Cow position:
               
chr5:62985355-62985654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
31, 118
               

               
Conread position:
               
54-195
               

               
Cow position:
               
chr5:41486896-41486759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
127, 25
               

               
Conread position:
               
54-326
               

               
Cow position:
               
chr5:16214528-16214805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
152, 60
               

               
Conread position:
               
54-345
               

               
Cow position:
               
chr5:54060114-54060414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
23, 40
               

               
Conread position:
               
56-348
               

               
Cow position:
               
chr5:57419950-57419653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
35, 5
               

               
Conread position:
               
57-233
               

               
Cow position:
               
chr5:44849879-44849706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 33
               

               
Conread position:
               
57-298
               

               
Cow position:
               
chr5:67540360-67540111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 69
               

               
Conread position:
               
59-345
               

               
Cow position:
               
chr5:35247265-35246972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
14, 67
               

               
Conread position:
               
67-274
               

               
Cow position:
               
chr5:54154534-54154325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
55, 127
               

               
Conread position:
               
67-300
               

               
Cow position:
               
chr5:14629959-14629718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 58
               

               
Conread position:
               
68-328
               

               
Cow position:
               
chr5:65883921-65883651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
63, 108
               

               
Conread position:
               
68-349
               

               
Cow position:
               
chr5:54750691-54750949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
258, 61
               

               
Conread position:
               
69-248
               

               
Cow position:
               
chr5:47721393-47721584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
71-212
               

               
Cow position:
               
chr5:19294628-19294493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
71-246
               

               
Cow position:
               
chr5:7921542-7921366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
137, 54
               

               
Conread position:
               
71-285
               

               
Cow position:
               
chr5:12566870-12566664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
72, 85
               

               
Conread position:
               
72-345
               

               
Cow position:
               
chr5:29097218-29097505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
50, 192
               

               
Conread position:
               
72-349
               

               
Cow position:
               
chr5:44447008-44446723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
138, 7
               

               
Conread position:
               
75-290
               

               
Cow position:
               
chr5:991328-991546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
103, 50
               

               
Conread position:
               
79-346
               

               
Cow position:
               
chr5:73168132-73167872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
247, 18
               

               
Conread position:
               
79-349
               

               
Cow position:
               
chr5:18288995-18289264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
127, 51
               

               
Conread position:
               
80-343
               

               
Cow position:
               
chr5:64027141-64026883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
248, 45
               

               
Conread position:
               
81-344
               

               
Cow position:
               
chr5:45273633-45273365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
115, 44
               

               
Conread position:
               
81-349
               

               
Cow position:
               
chr5:54768042-54767767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
115, 49
               

               
Conread position:
               
82-299
               

               
Cow position:
               
chr5:33552539-33552332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
82-345
               

               
Cow position:
               
chr5:64140399-64140676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
49, 81
               

               
Conread position:
               
82-348
               

               
Cow position:
               
chr5:33560865-33560593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
16, 7
               

               
Conread position:
               
82-348
               

               
Cow position:
               
chr5:63427137-63426864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
114, 25
               

               
Conread position:
               
91-312
               

               
Cow position:
               
chr5:19335909-19335677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 41
               

               
Conread position:
               
91-343
               

               
Cow position:
               
chr5:56680125-56680392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
94-345
               

               
Cow position:
               
chr5:44726445-44726196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
91, 31
               

               
Conread position:
               
95-298
               

               
Cow position:
               
chr5:30153143-30152945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
95-312
               

               
Cow position:
               
chr5:19523779-19524004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
36, 93
               

               
Conread position:
               
98-348
               

               
Cow position:
               
chr5:12901800-12902058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
99-345
               

               
Cow position:
               
chr5:49474659-49474406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 26
               

               
Conread position:
               
101-344
               

               
Cow position:
               
chr5:71846036-71845782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
21, 184
               

               
Conread position:
               
101-345
               

               
Cow position:
               
chr5:58446691-58446945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
77, 24
               

               
Conread position:
               
101-349
               

               
Cow position:
               
chr5:7697893-7698142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
103-345
               

               
Cow position:
               
chr5:23678814-23678565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
93, 176
               

               
Conread position:
               
104-349
               

               
Cow position:
               
chr5:35125945-35126197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
92, 9
               

               
Conread position:
               
106-300
               

               
Cow position:
               
chr5:56635793-56635987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
98, 24
               

               
Conread position:
               
106-312
               

               
Cow position:
               
chr5:43371305-43371091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
27, 144
               

               
Conread position:
               
107-349
               

               
Cow position:
               
chr5:41293974-41294223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
91, 25
               

               
Conread position:
               
111-331
               

               
Cow position:
               
chr5:23357234-23357452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
67, 5
               

               
Conread position:
               
115-346
               

               
Cow position:
               
chr5:55019195-55019431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
93, 63
               

               
Conread position:
               
121-344
               

               
Cow position:
               
chr5:46023151-46022927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 8
               

               
Conread position:
               
121-349
               

               
Cow position:
               
chr5:50575692-50575925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 10
               

               
Conread position:
               
125-325
               

               
Cow position:
               
chr5:1087286-1087082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
71, 32
               

               
Conread position:
               
125-344
               

               
Cow position:
               
chr5:33833954-33834177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 183
               

               
Conread position:
               
125-348
               

               
Cow position:
               
chr5:16939670-16939453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
203, 7
               

               
Conread position:
               
132-340
               

               
Cow position:
               
chr5:61914487-61914698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
133-348
               

               
Cow position:
               
chr5:45420220-45419996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
139-349
               

               
Cow position:
               
chr5:30805092-30805306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
159-347
               

               
Cow position:
               
chr5:55796017-55795826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 49
               

               
Conread position:
               
168-346
               

               
Cow position:
               
chr5:58555093-58555277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
199-345
               

               
Cow position:
               
chr5:49501834-49501686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
201-349
               

               
Cow position:
               
chr5:59627094-59627242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 10
               

               
Conread position:
               
202-349
               

               
Cow position:
               
chr5:57101529-57101382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
10, 61
               
Show alignments to all cow chromosomes.