Cow genome map
| Conread name: | rpigcf0_020330.y1 |
| Conread position: | 1-147 |
| Cow position: | chr11:30466885-30466743 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-148 |
| Cow position: | chr11:49873155-49873302 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 109 |
| Conread position: | 1-148 |
| Cow position: | chr11:78480524-78480675 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-152 |
| Cow position: | chr11:57499084-57498930 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 22, 126 |
| Conread position: | 1-157 |
| Cow position: | chr11:75510503-75510347 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 21, 33 |
| Conread position: | 1-161 |
| Cow position: | chr11:30172108-30172262 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1-187 |
| Cow position: | chr11:35874251-35874077 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 166, 19 |
| Conread position: | 1-189 |
| Cow position: | chr11:62376707-62376519 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 152 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 170, 109 |
| Conread position: | 1-190 |
| Cow position: | chr11:46746365-46746545 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 169, 81 |
| Conread position: | 1-200 |
| Cow position: | chr11:38235973-38236173 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 30, 111 |
| Conread position: | 1-204 |
| Cow position: | chr11:80820269-80820067 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 20, 116 |
| Conread position: | 1-208 |
| Cow position: | chr11:25745051-25745260 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 42 |
| Conread position: | 1-211 |
| Cow position: | chr11:17278932-17278725 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 143, 47 |
| Conread position: | 1-214 |
| Cow position: | chr11:81614902-81614697 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 151, 80 |
| Conread position: | 1-217 |
| Cow position: | chr11:7589920-7590140 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-217 |
| Cow position: | chr11:8988500-8988280 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 110 |
| Conread position: | 1-219 |
| Cow position: | chr11:13061494-13061288 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 22, 76 |
| Conread position: | 1-219 |
| Cow position: | chr11:44637031-44636809 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 77 |
| Conread position: | 1-220 |
| Cow position: | chr11:7248147-7247932 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 18, 96 |
| Conread position: | 1-220 |
| Cow position: | chr11:37278469-37278263 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 1-220 |
| Cow position: | chr11:63518744-63518962 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 1-220 |
| Cow position: | chr11:64334587-64334801 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 87 |
| Conread position: | 1-220 |
| Cow position: | chr11:76114384-76114601 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 24, 102 |
| Conread position: | 1-221 |
| Cow position: | chr11:955094-955316 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 34, 76 |
| Conread position: | 1-221 |
| Cow position: | chr11:25165175-25165392 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 1-222 |
| Cow position: | chr11:15125250-15125029 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 94 |
| Conread position: | 1-222 |
| Cow position: | chr11:50778099-50778325 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-223 |
| Cow position: | chr11:47165407-47165189 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 167, 122 |
| Conread position: | 1-228 |
| Cow position: | chr11:77207778-77208007 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 101 |
| Conread position: | 1-229 |
| Cow position: | chr11:3780695-3780466 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 17, 161 |
| Conread position: | 1-232 |
| Cow position: | chr11:34830050-34829819 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 25, 97 |
| Conread position: | 1-233 |
| Cow position: | chr11:62490163-62490394 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 110 |
| Conread position: | 1-235 |
| Cow position: | chr11:21844403-21844169 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 1-236 |
| Cow position: | chr11:19508026-19508262 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 82 |
| Conread position: | 1-238 |
| Cow position: | chr11:48271924-48272166 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-239 |
| Cow position: | chr11:68910118-68909883 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 96 |
| Conread position: | 1-241 |
| Cow position: | chr11:67747007-67747254 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 19, 226 |
| Conread position: | 1-242 |
| Cow position: | chr11:33341416-33341174 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 1-242 |
| Cow position: | chr11:52297494-52297249 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 1-243 |
| Cow position: | chr11:11752789-11752545 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 165, 97 |
| Conread position: | 1-244 |
| Cow position: | chr11:40911-41150 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 18, 43 |
| Conread position: | 1-244 |
| Cow position: | chr11:259449-259200 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 16, 62 |
| Conread position: | 1-244 |
| Cow position: | chr11:951998-952241 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 163 |
| Conread position: | 1-244 |
| Cow position: | chr11:1071362-1071119 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 106 |
| Conread position: | 1-244 |
| Cow position: | chr11:3704050-3704276 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 1-244 |
| Cow position: | chr11:6154142-6154381 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 166, 127 |
| Conread position: | 1-244 |
| Cow position: | chr11:8428224-8428483 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 200 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 17, 111 |
| Conread position: | 1-244 |
| Cow position: | chr11:10213831-10213592 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 66, 22 |
| Conread position: | 1-244 |
| Cow position: | chr11:10620596-10620357 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 66 |
| Conread position: | 1-244 |
| Cow position: | chr11:15632826-15632582 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 22 |
| Conread position: | 1-244 |
| Cow position: | chr11:18484430-18484197 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-244 |
| Cow position: | chr11:20761575-20761819 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 91 |
| Conread position: | 1-244 |
| Cow position: | chr11:24937392-24937637 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 143 |
| Conread position: | 1-244 |
| Cow position: | chr11:25319780-25320028 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-244 |
| Cow position: | chr11:25386800-25387038 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 1-244 |
| Cow position: | chr11:37068573-37068345 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 187 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 23, 33 |
| Conread position: | 1-244 |
| Cow position: | chr11:39115223-39115467 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 121 |
| Conread position: | 1-244 |
| Cow position: | chr11:43897867-43898111 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 161 |
| Conread position: | 1-244 |
| Cow position: | chr11:44234088-44234327 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 41 |
| Conread position: | 1-244 |
| Cow position: | chr11:50197715-50197461 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 227 |
| Conread position: | 1-244 |
| Cow position: | chr11:52381141-52380900 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 1-244 |
| Cow position: | chr11:59702214-59702458 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 106 |
| Conread position: | 1-244 |
| Cow position: | chr11:62151152-62150919 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 22, 95 |
| Conread position: | 1-244 |
| Cow position: | chr11:62750020-62749784 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 167 |
| Conread position: | 1-244 |
| Cow position: | chr11:63469613-63469847 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 170, 93 |
| Conread position: | 1-244 |
| Cow position: | chr11:69119029-69119265 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 171 |
| Conread position: | 1-244 |
| Cow position: | chr11:70619785-70620016 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 1-244 |
| Cow position: | chr11:80923606-80923349 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-211 |
| Cow position: | chr11:8841010-8840805 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 19, 169 |
| Conread position: | 2-217 |
| Cow position: | chr11:55333639-55333858 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 2-231 |
| Cow position: | chr11:31352840-31352606 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 21 |
| Conread position: | 2-242 |
| Cow position: | chr11:3393480-3393239 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 65 |
| Conread position: | 3-187 |
| Cow position: | chr11:83357124-83357307 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 3-188 |
| Cow position: | chr11:85189652-85189466 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 3-214 |
| Cow position: | chr11:76606421-76606619 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 167, 20 |
| Conread position: | 3-219 |
| Cow position: | chr11:29004170-29004381 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 163, 22 |
| Conread position: | 3-221 |
| Cow position: | chr11:27248224-27248443 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 20 |
| Conread position: | 3-222 |
| Cow position: | chr11:55052604-55052830 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 19, 176 |
| Conread position: | 3-222 |
| Cow position: | chr11:58990242-58990455 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 19, 94 |
| Conread position: | 3-232 |
| Cow position: | chr11:62574267-62574043 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 52 |
| Conread position: | 3-234 |
| Cow position: | chr11:75355341-75355572 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 81 |
| Conread position: | 3-241 |
| Cow position: | chr11:2092079-2092305 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 20, 35 |
| Conread position: | 3-243 |
| Cow position: | chr11:28643813-28644058 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 20, 69 |
| Conread position: | 3-244 |
| Cow position: | chr11:39499108-39499328 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 20, 74 |
| Conread position: | 3-244 |
| Cow position: | chr11:50153086-50152842 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 0 |
| Conread position: | 4-213 |
| Cow position: | chr11:44576004-44575801 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 113 |
| Conread position: | 4-238 |
| Cow position: | chr11:44036448-44036690 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 20, 218 |
| Conread position: | 4-244 |
| Cow position: | chr11:36659082-36658847 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 5-214 |
| Cow position: | chr11:59156137-59155936 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 161, 77 |
| Conread position: | 6-227 |
| Cow position: | chr11:36799561-36799345 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 139, 17 |
| Conread position: | 6-244 |
| Cow position: | chr11:16251515-16251272 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 107 |
| Conread position: | 7-209 |
| Cow position: | chr11:3719987-3720192 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 12, 159 |
| Conread position: | 7-211 |
| Cow position: | chr11:62880888-62880685 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 7-211 |
| Cow position: | chr11:82232157-82232360 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 159, 81 |
| Conread position: | 7-237 |
| Cow position: | chr11:21549231-21549450 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 11, 89 |
| Conread position: | 7-244 |
| Cow position: | chr11:34120929-34121170 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 20, 177 |
| Conread position: | 7-244 |
| Cow position: | chr11:47544863-47545106 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 8-146 |
| Cow position: | chr11:22499614-22499476 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 8-221 |
| Cow position: | chr11:23128803-23128592 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 15, 103 |
| Conread position: | 9-153 |
| Cow position: | chr11:31227732-31227869 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 14, 73 |
| Conread position: | 11-220 |
| Cow position: | chr11:39808730-39808942 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 177, 14 |
| Conread position: | 11-236 |
| Cow position: | chr11:171957-171737 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 90 |
| Conread position: | 11-243 |
| Cow position: | chr11:2917837-2917615 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 156, 12 |
| Conread position: | 11-244 |
| Cow position: | chr11:81162691-81162461 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 159, 76 |
| Conread position: | 14-244 |
| Cow position: | chr11:42793232-42793001 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 205 |
| Conread position: | 16-187 |
| Cow position: | chr11:70651699-70651532 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 16-242 |
| Cow position: | chr11:48544189-48544403 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 154, 17 |
| Conread position: | 17-217 |
| Cow position: | chr11:63516570-63516773 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 162 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 150, 0 |
| Conread position: | 17-219 |
| Cow position: | chr11:2050326-2050533 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 124, 79 |
| Conread position: | 17-222 |
| Cow position: | chr11:49152700-49152906 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 123, 54 |
| Conread position: | 17-225 |
| Cow position: | chr11:40818892-40818683 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 65 |
| Conread position: | 17-242 |
| Cow position: | chr11:1849419-1849201 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 91, 149 |
| Conread position: | 18-242 |
| Cow position: | chr11:35154080-35153854 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 212 |
| Conread position: | 18-243 |
| Cow position: | chr11:63520520-63520745 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 174 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 149, 98 |
| Conread position: | 19-242 |
| Cow position: | chr11:18707065-18706845 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 147, 102 |
| Conread position: | 19-244 |
| Cow position: | chr11:20238421-20238648 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 33, 88 |
| Conread position: | 20-221 |
| Cow position: | chr11:2907776-2907567 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 164 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 25-220 |
| Cow position: | chr11:47899031-47899229 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 27-168 |
| Cow position: | chr11:26277334-26277196 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 27-221 |
| Cow position: | chr11:77682928-77683120 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 121, 30 |
| Conread position: | 31-244 |
| Cow position: | chr11:62239510-62239717 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 134, 32 |
| Conread position: | 32-170 |
| Cow position: | chr11:44575460-44575599 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 93, 84 |
| Conread position: | 37-186 |
| Cow position: | chr11:70709788-70709639 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 104, 59 |
| Conread position: | 38-244 |
| Cow position: | chr11:65762828-65762625 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 129, 5 |
| Conread position: | 42-210 |
| Cow position: | chr11:18591662-18591492 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 125, 36 |
| Conread position: | 42-242 |
| Cow position: | chr11:66425119-66424909 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 29, 64 |
| Conread position: | 42-244 |
| Cow position: | chr11:21728496-21728304 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 125, 40 |
| Conread position: | 42-244 |
| Cow position: | chr11:27405297-27405098 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 150, 125 |
| Conread position: | 48-211 |
| Cow position: | chr11:17660872-17661033 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 119, 32 |
| Conread position: | 49-222 |
| Cow position: | chr11:2925512-2925339 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 118, 168 |
| Conread position: | 53-222 |
| Cow position: | chr11:1599169-1599329 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 56-225 |
| Cow position: | chr11:11557954-11558122 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 114, 43 |
| Conread position: | 58-230 |
| Cow position: | chr11:23586422-23586595 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 109, 171 |
| Conread position: | 59-244 |
| Cow position: | chr11:42044202-42044020 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 95, 105 |
| Conread position: | 62-225 |
| Cow position: | chr11:36672259-36672087 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 71-244 |
| Cow position: | chr11:8936687-8936516 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 72-242 |
| Cow position: | chr11:15338876-15339033 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 84-244 |
| Cow position: | chr11:34646402-34646561 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 67, 108 |
| Conread position: | 89-244 |
| Cow position: | chr11:47850842-47850998 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 81, 128 |
| Conread position: | 90-223 |
| Cow position: | chr11:30954815-30954952 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 100-244 |
| Cow position: | chr11:30830789-30830642 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 102-244 |
| Cow position: | chr11:16907214-16907069 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 43 |
| Conread position: | 108-244 |
| Cow position: | chr11:48295867-48296005 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 79, 62 |
| Conread position: | 111-242 |
| Cow position: | chr11:35258263-35258128 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 114-244 |
| Cow position: | chr11:71390723-71390589 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 116-244 |
| Cow position: | chr11:55494522-55494651 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 51, 113 |
| Conread position: | 123-217 |
| Cow position: | chr11:17493328-17493423 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 83 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 125-221 |
| Cow position: | chr11:70741124-70741025 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 86 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 129-244 |
| Cow position: | chr11:69075764-69075883 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 98 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 41, 0 |
Show alignments to all cow chromosomes.