Cow genome map


           Conread name:
           rpigcf0_020330.y1
        

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               161
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-188
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               22, 97
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 101
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 154
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               166, 25
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 106
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               23, 98
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               23, 118
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 57
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 216
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               188, 93
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               19, 136
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               164
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               20, 45
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               169, 77
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               22, 123
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 104
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 11
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               174
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               166, 22
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               18, 163
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               42, 22
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               166, 55
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               189, 70
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 218
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 217
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               17, 75
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 229
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               186
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               166, 79
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               85, 22
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               16, 79
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 5
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               165, 70
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 125
               

               Conread position:
               2-195
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               2-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               84, 109
               

               Conread position:
               2-222
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 106
               

               Conread position:
               2-235
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               146, 13
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 41
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               22, 41
               

               Conread position:
               3-184
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               148
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               27, 94
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               21, 92
               

               Conread position:
               3-229
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               141, 72
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               20, 168
               

               Conread position:
               6-217
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               133, 157
               

               Conread position:
               6-242
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 95
               

               Conread position:
               7-222
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               12, 88
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 50
               

               Conread position:
               11-174
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               11-221
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               167
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               10, 35
               

               Conread position:
               11-242
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               156, 110
               

               Conread position:
               13-243
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               154, 68
               

               Conread position:
               15-244
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 95
               

               Conread position:
               17-244
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 171
               

               Conread position:
               19-204
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               150, 75
               

               Conread position:
               19-242
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               169, 136
               

               Conread position:
               28-236
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               116, 82
               

               Conread position:
               36-220
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               134, 73
               

               Conread position:
               46-244
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               121, 43
               

               Conread position:
               49-244
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               50-208
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               116, 99
               

               Conread position:
               52-243
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               118, 92
               

               Conread position:
               53-244
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               116, 28
               

               Conread position:
               54-244
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 27
               

               Conread position:
               57-244
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               133, 5
               

               Conread position:
               59-217
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               59-243
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               108, 168
               

               Conread position:
               61-198
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               70-244
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               85-244
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               85, 70
               
Show alignments to all cow chromosomes.