Cow genome map

Conread name: rpigcf0_020330.y1

Conread position: 1-186
Cow position:
Alignm length: 188
Alignm identity: 145
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 106

Conread position: 1-190
Cow position:
Alignm length: 192
Alignm identity: 158
Alignm E-value: 0
Alignm gaps (pig, cow): 126, 74

Conread position: 1-204
Cow position:
Alignm length: 205
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 174, 21

Conread position: 1-205
Cow position:
Alignm length: 210
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 34

Conread position: 1-205
Cow position:
Alignm length: 207
Alignm identity: 145
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 187, 67

Conread position: 1-209
Cow position:
Alignm length: 216
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 96

Conread position: 1-210
Cow position:
Alignm length: 213
Alignm identity: 151
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 22, 166

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 166, 60

Conread position: 1-213
Cow position:
Alignm length: 216
Alignm identity: 168
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 165, 87

Conread position: 1-214
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 23, 102

Conread position: 1-216
Cow position:
Alignm length: 220
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 34

Conread position: 1-217
Cow position:
Alignm length: 219
Alignm identity: 156
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 17, 98

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 164
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 169, 95

Conread position: 1-218
Cow position:
Alignm length: 222
Alignm identity: 170
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 144

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 114

Conread position: 1-218
Cow position:
Alignm length: 221
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 110

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 181

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 22, 76

Conread position: 1-219
Cow position:
Alignm length: 220
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 88

Conread position: 1-219
Cow position:
Alignm length: 223
Alignm identity: 171
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 19, 96

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 17, 59

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 82

Conread position: 1-220
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 165

Conread position: 1-220
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 165

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 159
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 58, 85

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 167

Conread position: 1-221
Cow position:
Alignm length: 223
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 68

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 94

Conread position: 1-221
Cow position:
Alignm length: 231
Alignm identity: 176
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 19, 43

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 100

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 88

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 112

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 42

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 1-223
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 144, 23

Conread position: 1-229
Cow position:
Alignm length: 230
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 17, 98

Conread position: 1-232
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 172

Conread position: 1-236
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 20, 110

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 85, 94

Conread position: 1-238
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 191, 22

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 62

Conread position: 1-239
Cow position:
Alignm length: 243
Alignm identity: 181
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 230

Conread position: 1-242
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 26

Conread position: 1-243
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 103

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 189
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 22, 81

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 82

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 143, 0

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 174
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 164, 47

Conread position: 1-244
Cow position:
Alignm length: 253
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 224

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 181
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 17, 53

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 8

Conread position: 1-244
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 92, 0

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 55

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 166, 20

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 162, 23

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 53

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 110

Conread position: 1-244
Cow position:
Alignm length: 257
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 20, 33

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 117

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 22, 89

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-244
Cow position:
Alignm length: 251
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 52

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 107

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 237, 24

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 81

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 81

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 86

Conread position: 2-204
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 57, 100

Conread position: 2-211
Cow position:
Alignm length: 213
Alignm identity: 159
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 16, 30

Conread position: 2-220
Cow position:
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 0

Conread position: 2-232
Cow position:
Alignm length: 235
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 80

Conread position: 2-243
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 17, 76

Conread position: 2-244
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 21, 96

Conread position: 2-244
Cow position:
Alignm length: 252
Alignm identity: 187
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 39, 145

Conread position: 2-244
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 80

Conread position: 3-213
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 20, 91

Conread position: 3-218
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 20, 100

Conread position: 3-219
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 149, 20

Conread position: 3-221
Cow position:
Alignm length: 223
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 3-244
Cow position:
Alignm length: 246
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 46

Conread position: 3-244
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 120, 0

Conread position: 3-244
Cow position:
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 104

Conread position: 3-244
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 100

Conread position: 3-244
Cow position:
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 209

Conread position: 6-238
Cow position:
Alignm length: 237
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 166

Conread position: 6-242
Cow position:
Alignm length: 240
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 17, 78

Conread position: 6-244
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 14, 105

Conread position: 6-244
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 17, 52

Conread position: 7-212
Cow position:
Alignm length: 209
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 164

Conread position: 9-211
Cow position:
Alignm length: 210
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 94

Conread position: 11-204
Cow position:
Alignm length: 196
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 11-214
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 104, 0

Conread position: 11-218
Cow position:
Alignm length: 214
Alignm identity: 154
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 13, 71

Conread position: 11-222
Cow position:
Alignm length: 217
Alignm identity: 166
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 14, 65

Conread position: 11-244
Cow position:
Alignm length: 238
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 220

Conread position: 12-244
Cow position:
Alignm length: 237
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 95

Conread position: 14-172
Cow position:
Alignm length: 162
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 38, 155

Conread position: 14-218
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 39, 155

Conread position: 15-206
Cow position:
Alignm length: 198
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 18, 76

Conread position: 15-244
Cow position:
Alignm length: 234
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 151, 67

Conread position: 17-190
Cow position:
Alignm length: 176
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 79

Conread position: 17-199
Cow position:
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 150, 78

Conread position: 17-216
Cow position:
Alignm length: 202
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 172, 36

Conread position: 17-225
Cow position:
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 154, 63

Conread position: 17-244
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 173, 59

Conread position: 18-237
Cow position:
Alignm length: 223
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 152, 64

Conread position: 18-244
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 88

Conread position: 18-244
Cow position:
Alignm length: 230
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 148, 82

Conread position: 18-244
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 121, 15

Conread position: 23-220
Cow position:
Alignm length: 204
Alignm identity: 151
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 127, 75

Conread position: 23-221
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 80

Conread position: 24-244
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 142, 61

Conread position: 28-223
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 139, 54

Conread position: 31-242
Cow position:
Alignm length: 215
Alignm identity: 162
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 136, 0

Conread position: 34-214
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 111, 19

Conread position: 35-223
Cow position:
Alignm length: 195
Alignm identity: 150
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 42, 64

Conread position: 37-244
Cow position:
Alignm length: 215
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 130, 45

Conread position: 44-225
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 96, 35

Conread position: 50-244
Cow position:
Alignm length: 199
Alignm identity: 159
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 7, 76

Conread position: 52-244
Cow position:
Alignm length: 197
Alignm identity: 154
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 60, 179

Conread position: 56-244
Cow position:
Alignm length: 192
Alignm identity: 146
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 111, 93

Conread position: 59-229
Cow position:
Alignm length: 173
Alignm identity: 133
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 154, 111

Conread position: 59-232
Cow position:
Alignm length: 177
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 37

Conread position: 67-242
Cow position:
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 15

Conread position: 72-244
Cow position:
Alignm length: 174
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 13

Conread position: 76-243
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 156

Conread position: 86-218
Cow position:
Alignm length: 136
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 101, 0

Conread position: 90-244
Cow position:
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 77, 39

Conread position: 92-244
Cow position:
Alignm length: 157
Alignm identity: 121
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 75, 50

Conread position: 93-220
Cow position:
Alignm length: 128
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 96-220
Cow position:
Alignm length: 128
Alignm identity: 105
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 70, 0

Conread position: 100-244
Cow position:
Alignm length: 147
Alignm identity: 115
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 67, 0

Conread position: 100-244
Cow position:
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 67, 17

Conread position: 120-234
Cow position:
Alignm length: 118
Alignm identity: 97
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 47, 0

Conread position: 123-244
Cow position:
Alignm length: 125
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 107

Conread position: 138-244
Cow position:
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.