Cow genome map


           Conread name:
           rpigcf0_020330.y1
        

               Conread position:
               1-154
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               17, 49
               

               Conread position:
               1-180
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               145
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               165, 95
               

               Conread position:
               1-190
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               1-194
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-199
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 110
               

               Conread position:
               1-201
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               163
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               167, 25
               

               Conread position:
               1-204
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               20, 186
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               21, 108
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               17, 92
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               172
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               139, 22
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               1-215
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               17, 165
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 216
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 94
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               168, 81
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               22, 180
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               22, 166
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               141, 80
               

               Conread position:
               1-229
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               181
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               21, 94
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               1-234
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               188, 21
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               166, 41
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               21, 56
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               17, 109
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 37
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 226
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 170
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 146
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               173, 81
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               191
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               22, 38
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               160, 19
               

               Conread position:
               3-210
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 92
               

               Conread position:
               3-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               164, 107
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               3-242
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               4-175
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               4-199
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 60
               

               Conread position:
               5-240
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               180
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               162, 90
               

               Conread position:
               6-178
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               133
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               12, 48
               

               Conread position:
               6-197
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 64
               

               Conread position:
               6-220
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               6-221
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               167
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               15, 158
               

               Conread position:
               6-223
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               7-220
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               16, 25
               

               Conread position:
               9-244
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               11-199
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               12, 123
               

               Conread position:
               11-233
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               19-244
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               20-210
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               63, 94
               

               Conread position:
               20-244
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               28, 7
               

               Conread position:
               21-239
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               168, 59
               

               Conread position:
               31-185
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               136, 65
               

               Conread position:
               32-214
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               134, 16
               

               Conread position:
               36-217
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 53
               

               Conread position:
               37-220
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               37, 70
               

               Conread position:
               43-214
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               45-217
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               122, 25
               

               Conread position:
               46-206
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               51-232
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               52-244
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               114, 131
               

               Conread position:
               59-244
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               108, 132
               

               Conread position:
               59-244
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               84, 108
               

               Conread position:
               71-222
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               96, 27
               

               Conread position:
               84-221
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               86-243
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               87-220
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               87-244
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               93-235
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               101-244
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               103-244
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               111-242
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               59, 116
               

               Conread position:
               111-244
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 9
               
Show alignments to all cow chromosomes.