Cow genome map

Conread name: rpigcf0_020330.y1

Conread position: 1-148
Cow position:
Alignm length: 149
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 18, 87

Conread position: 1-187
Cow position:
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 92

Conread position: 1-198
Cow position:
Alignm length: 203
Alignm identity: 146
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 18, 115

Conread position: 1-204
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 100

Conread position: 1-213
Cow position:
Alignm length: 219
Alignm identity: 165
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 20, 81

Conread position: 1-213
Cow position:
Alignm length: 217
Alignm identity: 168
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 116

Conread position: 1-214
Cow position:
Alignm length: 215
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 169, 81

Conread position: 1-214
Cow position:
Alignm length: 220
Alignm identity: 165
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 20, 67

Conread position: 1-215
Cow position:
Alignm length: 218
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 97

Conread position: 1-217
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 89

Conread position: 1-217
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 21, 0

Conread position: 1-217
Cow position:
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 75

Conread position: 1-219
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 17, 87

Conread position: 1-219
Cow position:
Alignm length: 223
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 22, 80

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 166
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 22, 152

Conread position: 1-220
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 25, 0

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 64

Conread position: 1-220
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 84, 0

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 166, 215

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 33

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 26, 71

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 171
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 144, 58

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 98

Conread position: 1-225
Cow position:
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 172

Conread position: 1-225
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 81, 0

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 19, 165

Conread position: 1-229
Cow position:
Alignm length: 233
Alignm identity: 181
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 22, 42

Conread position: 1-229
Cow position:
Alignm length: 231
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 79

Conread position: 1-231
Cow position:
Alignm length: 234
Alignm identity: 172
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 169, 20

Conread position: 1-233
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 17, 157

Conread position: 1-236
Cow position:
Alignm length: 244
Alignm identity: 187
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 17, 92

Conread position: 1-237
Cow position:
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 190

Conread position: 1-240
Cow position:
Alignm length: 241
Alignm identity: 169
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 78, 47

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 187
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 106

Conread position: 1-241
Cow position:
Alignm length: 243
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 0

Conread position: 1-242
Cow position:
Alignm length: 249
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 167

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 146, 224

Conread position: 1-243
Cow position:
Alignm length: 247
Alignm identity: 170
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 17, 92

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 94

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 48

Conread position: 1-244
Cow position:
Alignm length: 251
Alignm identity: 189
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 17, 0

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 166, 80

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 167

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 111

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 182
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 19, 33

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 22, 93

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 182
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 17, 100

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 95

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-244
Cow position:
Alignm length: 252
Alignm identity: 191
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 165, 105

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 108

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 188

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 106

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 105

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 19, 75

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 190
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 119, 81

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 81

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 11

Conread position: 1-244
Cow position:
Alignm length: 252
Alignm identity: 186
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 166

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 203

Conread position: 2-205
Cow position:
Alignm length: 206
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 91

Conread position: 2-214
Cow position:
Alignm length: 217
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 2-232
Cow position:
Alignm length: 233
Alignm identity: 179
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 188, 11

Conread position: 2-244
Cow position:
Alignm length: 252
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 2-244
Cow position:
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 2-244
Cow position:
Alignm length: 248
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 2-244
Cow position:
Alignm length: 251
Alignm identity: 182
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 26, 105

Conread position: 2-244
Cow position:
Alignm length: 254
Alignm identity: 184
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 16, 32

Conread position: 2-244
Cow position:
Alignm length: 252
Alignm identity: 182
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 11

Conread position: 3-188
Cow position:
Alignm length: 188
Alignm identity: 150
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 80

Conread position: 3-212
Cow position:
Alignm length: 211
Alignm identity: 163
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 166, 107

Conread position: 3-214
Cow position:
Alignm length: 216
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 15, 135

Conread position: 3-219
Cow position:
Alignm length: 221
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 108

Conread position: 3-221
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 148, 91

Conread position: 3-221
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 167, 20

Conread position: 3-222
Cow position:
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 144

Conread position: 3-244
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 230

Conread position: 3-244
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 104

Conread position: 3-244
Cow position:
Alignm length: 245
Alignm identity: 175
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 15, 80

Conread position: 3-244
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 104

Conread position: 4-225
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 107

Conread position: 7-190
Cow position:
Alignm length: 189
Alignm identity: 144
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 88

Conread position: 7-214
Cow position:
Alignm length: 212
Alignm identity: 165
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 16, 36

Conread position: 7-221
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 138, 19

Conread position: 10-219
Cow position:
Alignm length: 220
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 13, 72

Conread position: 11-198
Cow position:
Alignm length: 191
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 11, 32

Conread position: 11-217
Cow position:
Alignm length: 211
Alignm identity: 156
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 85, 70

Conread position: 11-244
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 130, 22

Conread position: 13-244
Cow position:
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 15-244
Cow position:
Alignm length: 233
Alignm identity: 176
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 152, 44

Conread position: 16-218
Cow position:
Alignm length: 207
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 132

Conread position: 17-183
Cow position:
Alignm length: 168
Alignm identity: 131
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 148, 20

Conread position: 17-225
Cow position:
Alignm length: 214
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 151, 63

Conread position: 17-244
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 94, 32

Conread position: 17-244
Cow position:
Alignm length: 229
Alignm identity: 178
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 69, 105

Conread position: 17-244
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 128, 77

Conread position: 18-244
Cow position:
Alignm length: 230
Alignm identity: 176
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 151, 63

Conread position: 22-244
Cow position:
Alignm length: 226
Alignm identity: 166
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 12, 75

Conread position: 23-220
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 148, 120

Conread position: 23-243
Cow position:
Alignm length: 225
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 0

Conread position: 27-217
Cow position:
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 144, 55

Conread position: 27-219
Cow position:
Alignm length: 198
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 27

Conread position: 30-242
Cow position:
Alignm length: 214
Alignm identity: 156
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 74

Conread position: 35-240
Cow position:
Alignm length: 209
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 46

Conread position: 35-244
Cow position:
Alignm length: 213
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 135, 79

Conread position: 35-244
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 63

Conread position: 35-244
Cow position:
Alignm length: 213
Alignm identity: 164
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 131, 71

Conread position: 36-241
Cow position:
Alignm length: 211
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 71, 185

Conread position: 38-220
Cow position:
Alignm length: 187
Alignm identity: 152
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 128, 30

Conread position: 48-244
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 95, 17

Conread position: 49-224
Cow position:
Alignm length: 181
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 74, 107

Conread position: 51-244
Cow position:
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 53, 106

Conread position: 52-225
Cow position:
Alignm length: 177
Alignm identity: 132
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 115, 40

Conread position: 53-239
Cow position:
Alignm length: 188
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 169, 45

Conread position: 59-221
Cow position:
Alignm length: 170
Alignm identity: 130
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 82, 69

Conread position: 59-244
Cow position:
Alignm length: 189
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 128, 96

Conread position: 64-232
Cow position:
Alignm length: 173
Alignm identity: 134
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 8, 31

Conread position: 72-230
Cow position:
Alignm length: 164
Alignm identity: 124
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 39, 93

Conread position: 72-244
Cow position:
Alignm length: 178
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 25, 9

Conread position: 84-243
Cow position:
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 0

Conread position: 85-218
Cow position:
Alignm length: 136
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 85-244
Cow position:
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 43

Conread position: 86-242
Cow position:
Alignm length: 165
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 68, 49

Conread position: 94-244
Cow position:
Alignm length: 154
Alignm identity: 118
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 95, 74

Conread position: 100-232
Cow position:
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 100-244
Cow position:
Alignm length: 146
Alignm identity: 114
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 65, 88

Conread position: 123-215
Cow position:
Alignm length: 96
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 123-225
Cow position:
Alignm length: 106
Alignm identity: 89
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 137-244
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 90

Show alignments to all cow chromosomes.