Cow genome map

Conread name: rpigcf0_020330.y1

Conread position: 1-155
Cow position:
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 99

Conread position: 1-156
Cow position:
Alignm length: 161
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 138

Conread position: 1-156
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 23, 42

Conread position: 1-176
Cow position:
Alignm length: 178
Alignm identity: 139
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 31

Conread position: 1-182
Cow position:
Alignm length: 182
Alignm identity: 147
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 124, 0

Conread position: 1-184
Cow position:
Alignm length: 185
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 23, 42

Conread position: 1-196
Cow position:
Alignm length: 197
Alignm identity: 147
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 166, 132

Conread position: 1-197
Cow position:
Alignm length: 199
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-205
Cow position:
Alignm length: 209
Alignm identity: 166
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-207
Cow position:
Alignm length: 213
Alignm identity: 163
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 150, 81

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 22, 71

Conread position: 1-211
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 101

Conread position: 1-213
Cow position:
Alignm length: 216
Alignm identity: 148
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 169, 22

Conread position: 1-214
Cow position:
Alignm length: 219
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 22, 97

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 95

Conread position: 1-217
Cow position:
Alignm length: 217
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-217
Cow position:
Alignm length: 221
Alignm identity: 164
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 62

Conread position: 1-218
Cow position:
Alignm length: 222
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 115

Conread position: 1-219
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 166, 33

Conread position: 1-220
Cow position:
Alignm length: 223
Alignm identity: 169
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 168, 36

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 0

Conread position: 1-220
Cow position:
Alignm length: 222
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 189, 48

Conread position: 1-221
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 17, 76

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 43

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 59

Conread position: 1-222
Cow position:
Alignm length: 230
Alignm identity: 174
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 102

Conread position: 1-222
Cow position:
Alignm length: 230
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 100

Conread position: 1-222
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 22, 94

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 170
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 142, 83

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 22, 33

Conread position: 1-223
Cow position:
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 179

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 177
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 21, 95

Conread position: 1-230
Cow position:
Alignm length: 234
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 81

Conread position: 1-232
Cow position:
Alignm length: 240
Alignm identity: 176
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 69

Conread position: 1-233
Cow position:
Alignm length: 239
Alignm identity: 184
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 20, 60

Conread position: 1-238
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 50

Conread position: 1-238
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 129, 22

Conread position: 1-238
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 96

Conread position: 1-239
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 156, 22

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 18, 63

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 97

Conread position: 1-242
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 169, 65

Conread position: 1-243
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 5

Conread position: 1-243
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 22, 101

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 24, 71

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 175
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 25, 112

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 58

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 20, 158

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 16

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 166, 24

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 187, 29

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 185
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 76, 130

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 227

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 124

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 22, 89

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 22, 81

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 186
Alignm E-value: 8.99998e-41
Alignm gaps (pig, cow): 18, 169

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 165

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 20, 159

Conread position: 2-221
Cow position:
Alignm length: 223
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 76

Conread position: 2-244
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 187, 22

Conread position: 2-244
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 56

Conread position: 2-244
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 165

Conread position: 2-244
Cow position:
Alignm length: 255
Alignm identity: 191
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 17, 75

Conread position: 3-180
Cow position:
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 20, 101

Conread position: 3-206
Cow position:
Alignm length: 206
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 184, 23

Conread position: 3-214
Cow position:
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 138, 20

Conread position: 3-220
Cow position:
Alignm length: 222
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 73

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 171
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 167, 24

Conread position: 3-229
Cow position:
Alignm length: 228
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 214

Conread position: 3-240
Cow position:
Alignm length: 241
Alignm identity: 179
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 21, 63

Conread position: 3-242
Cow position:
Alignm length: 243
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 97

Conread position: 3-244
Cow position:
Alignm length: 262
Alignm identity: 195
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 38, 119

Conread position: 3-244
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 163, 14

Conread position: 3-244
Cow position:
Alignm length: 247
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 63

Conread position: 3-244
Cow position:
Alignm length: 245
Alignm identity: 182
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 15, 96

Conread position: 3-244
Cow position:
Alignm length: 258
Alignm identity: 183
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 60

Conread position: 3-244
Cow position:
Alignm length: 246
Alignm identity: 183
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 76, 20

Conread position: 4-244
Cow position:
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 18

Conread position: 5-211
Cow position:
Alignm length: 212
Alignm identity: 151
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 13, 35

Conread position: 7-222
Cow position:
Alignm length: 220
Alignm identity: 159
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 16, 42

Conread position: 7-231
Cow position:
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 127, 16

Conread position: 7-244
Cow position:
Alignm length: 243
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 15, 61

Conread position: 8-214
Cow position:
Alignm length: 211
Alignm identity: 162
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 15, 93

Conread position: 8-220
Cow position:
Alignm length: 215
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 87

Conread position: 10-222
Cow position:
Alignm length: 216
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 209

Conread position: 11-223
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 9, 65

Conread position: 11-242
Cow position:
Alignm length: 237
Alignm identity: 181
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 12, 95

Conread position: 12-188
Cow position:
Alignm length: 177
Alignm identity: 129
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 17-220
Cow position:
Alignm length: 206
Alignm identity: 148
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 172, 58

Conread position: 19-187
Cow position:
Alignm length: 172
Alignm identity: 135
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 121, 90

Conread position: 21-244
Cow position:
Alignm length: 227
Alignm identity: 163
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 149, 10

Conread position: 23-218
Cow position:
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 41, 95

Conread position: 24-221
Cow position:
Alignm length: 201
Alignm identity: 158
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 143, 58

Conread position: 36-217
Cow position:
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 51, 0

Conread position: 40-244
Cow position:
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 150, 11

Conread position: 41-222
Cow position:
Alignm length: 185
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 129, 27

Conread position: 42-220
Cow position:
Alignm length: 181
Alignm identity: 142
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 147, 43

Conread position: 42-243
Cow position:
Alignm length: 203
Alignm identity: 157
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 128, 71

Conread position: 42-244
Cow position:
Alignm length: 206
Alignm identity: 162
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 125, 0

Conread position: 50-217
Cow position:
Alignm length: 173
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 50-220
Cow position:
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 120, 69

Conread position: 50-225
Cow position:
Alignm length: 180
Alignm identity: 135
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 116, 72

Conread position: 51-244
Cow position:
Alignm length: 195
Alignm identity: 153
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 116, 138

Conread position: 52-211
Cow position:
Alignm length: 163
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 16

Conread position: 56-244
Cow position:
Alignm length: 189
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 71-244
Cow position:
Alignm length: 177
Alignm identity: 136
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 99, 159

Conread position: 78-244
Cow position:
Alignm length: 170
Alignm identity: 122
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 89, 141

Conread position: 85-244
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 93-222
Cow position:
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 97-244
Cow position:
Alignm length: 154
Alignm identity: 125
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 100-221
Cow position:
Alignm length: 125
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 100-241
Cow position:
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 37

Conread position: 102-239
Cow position:
Alignm length: 140
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 68

Conread position: 108-243
Cow position:
Alignm length: 140
Alignm identity: 108
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 135

Show alignments to all cow chromosomes.