Cow genome map

Conread name: rpigcf0_020330.y1

Conread position: 1-149
Cow position:
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 1-174
Cow position:
Alignm length: 177
Alignm identity: 138
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 22, 96

Conread position: 1-188
Cow position:
Alignm length: 189
Alignm identity: 154
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 165, 81

Conread position: 1-194
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 112, 95

Conread position: 1-198
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 165, 21

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 168
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 166, 105

Conread position: 1-213
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 166, 79

Conread position: 1-215
Cow position:
Alignm length: 221
Alignm identity: 162
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 22, 165

Conread position: 1-217
Cow position:
Alignm length: 220
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 94

Conread position: 1-217
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 23, 42

Conread position: 1-217
Cow position:
Alignm length: 220
Alignm identity: 169
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 17, 33

Conread position: 1-218
Cow position:
Alignm length: 221
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 164

Conread position: 1-218
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 142, 22

Conread position: 1-219
Cow position:
Alignm length: 223
Alignm identity: 168
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 17, 82

Conread position: 1-220
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 84

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 170
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 20, 0

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 51

Conread position: 1-221
Cow position:
Alignm length: 223
Alignm identity: 162
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 18, 83

Conread position: 1-221
Cow position:
Alignm length: 226
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 81

Conread position: 1-221
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 22, 83

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 24, 139

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 71

Conread position: 1-222
Cow position:
Alignm length: 224
Alignm identity: 178
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 22, 59

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 169
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 18, 97

Conread position: 1-223
Cow position:
Alignm length: 229
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-225
Cow position:
Alignm length: 229
Alignm identity: 168
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 23, 158

Conread position: 1-225
Cow position:
Alignm length: 226
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 21

Conread position: 1-229
Cow position:
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 23, 123

Conread position: 1-230
Cow position:
Alignm length: 231
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 173

Conread position: 1-231
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 17, 100

Conread position: 1-232
Cow position:
Alignm length: 236
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 23, 94

Conread position: 1-232
Cow position:
Alignm length: 236
Alignm identity: 169
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 0

Conread position: 1-233
Cow position:
Alignm length: 242
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 51

Conread position: 1-237
Cow position:
Alignm length: 240
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 169, 19

Conread position: 1-242
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 100

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 22, 78

Conread position: 1-242
Cow position:
Alignm length: 251
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 83

Conread position: 1-242
Cow position:
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 127

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 166, 65

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 189
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 20, 82

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 189
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 73

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 92

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 192
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 17, 102

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 162

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 144, 21

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 234

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 0

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 175
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 16, 149

Conread position: 1-244
Cow position:
Alignm length: 244
Alignm identity: 145
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 165, 0

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 21, 96

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 16

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 167, 25

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 150

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 21

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 139

Conread position: 1-244
Cow position:
Alignm length: 244
Alignm identity: 174
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 0

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 23, 71

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 80

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 42

Conread position: 2-168
Cow position:
Alignm length: 169
Alignm identity: 136
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 26, 0

Conread position: 2-236
Cow position:
Alignm length: 237
Alignm identity: 177
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 195

Conread position: 2-244
Cow position:
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 0

Conread position: 2-244
Cow position:
Alignm length: 253
Alignm identity: 193
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 21, 86

Conread position: 3-216
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 65

Conread position: 3-221
Cow position:
Alignm length: 220
Alignm identity: 173
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 15, 77

Conread position: 3-221
Cow position:
Alignm length: 222
Alignm identity: 167
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 19, 90

Conread position: 3-223
Cow position:
Alignm length: 226
Alignm identity: 176
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 20, 99

Conread position: 3-225
Cow position:
Alignm length: 229
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 20, 35

Conread position: 4-244
Cow position:
Alignm length: 246
Alignm identity: 182
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 18, 84

Conread position: 4-244
Cow position:
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 104

Conread position: 4-244
Cow position:
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 80

Conread position: 5-244
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 18

Conread position: 6-244
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 28

Conread position: 7-229
Cow position:
Alignm length: 227
Alignm identity: 162
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 12, 58

Conread position: 7-240
Cow position:
Alignm length: 239
Alignm identity: 182
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 17, 36

Conread position: 8-243
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 139, 222

Conread position: 9-236
Cow position:
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 39

Conread position: 9-244
Cow position:
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 162, 21

Conread position: 11-204
Cow position:
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 86

Conread position: 11-225
Cow position:
Alignm length: 227
Alignm identity: 166
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 83, 101

Conread position: 13-244
Cow position:
Alignm length: 236
Alignm identity: 185
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 154, 58

Conread position: 14-244
Cow position:
Alignm length: 233
Alignm identity: 157
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 153, 101

Conread position: 17-229
Cow position:
Alignm length: 218
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 17-244
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 128, 77

Conread position: 18-188
Cow position:
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 152, 63

Conread position: 19-217
Cow position:
Alignm length: 201
Alignm identity: 146
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 123, 0

Conread position: 24-221
Cow position:
Alignm length: 203
Alignm identity: 159
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 84, 0

Conread position: 27-205
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 143, 67

Conread position: 27-225
Cow position:
Alignm length: 200
Alignm identity: 157
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 142, 121

Conread position: 36-208
Cow position:
Alignm length: 180
Alignm identity: 137
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 130, 58

Conread position: 37-214
Cow position:
Alignm length: 181
Alignm identity: 136
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 130, 94

Conread position: 37-220
Cow position:
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 130, 59

Conread position: 41-225
Cow position:
Alignm length: 188
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 125, 54

Conread position: 42-244
Cow position:
Alignm length: 206
Alignm identity: 143
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 129, 102

Conread position: 44-244
Cow position:
Alignm length: 202
Alignm identity: 145
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 129, 0

Conread position: 46-244
Cow position:
Alignm length: 199
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 100, 0

Conread position: 47-222
Cow position:
Alignm length: 176
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 53, 0

Conread position: 47-238
Cow position:
Alignm length: 193
Alignm identity: 143
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 23, 46

Conread position: 50-177
Cow position:
Alignm length: 130
Alignm identity: 107
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 116, 73

Conread position: 51-235
Cow position:
Alignm length: 188
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 41

Conread position: 52-244
Cow position:
Alignm length: 197
Alignm identity: 150
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 34, 44

Conread position: 54-221
Cow position:
Alignm length: 174
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 16, 32

Conread position: 60-232
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 60-244
Cow position:
Alignm length: 190
Alignm identity: 149
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 68-244
Cow position:
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 8

Conread position: 82-241
Cow position:
Alignm length: 164
Alignm identity: 126
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 16

Conread position: 97-244
Cow position:
Alignm length: 151
Alignm identity: 112
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 70, 28

Conread position: 123-244
Cow position:
Alignm length: 126
Alignm identity: 104
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 44, 0

Show alignments to all cow chromosomes.