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Cow genome map

           
Conread name:
           
rpigcf0_020330.y1
        

               
Conread position:
               
1-146
               

               
Cow position:
               
chr2:44007044-44007189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
107, 125
               

               
Conread position:
               
1-148
               

               
Cow position:
               
chr2:68413793-68413649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
18, 92
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr2:30910173-30910334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr2:15693979-15694149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
18, 53
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr2:22254413-22254238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr2:52409521-52409353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 49
               

               
Conread position:
               
1-186
               

               
Cow position:
               
chr2:61681340-61681524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
22, 59
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr2:64533090-64533278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
19, 81
               

               
Conread position:
               
1-192
               

               
Cow position:
               
chr2:44032781-44032602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
20, 92
               

               
Conread position:
               
1-195
               

               
Cow position:
               
chr2:4922372-4922181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
169, 41
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr2:14884034-14884230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
165, 81
               

               
Conread position:
               
1-199
               

               
Cow position:
               
chr2:50352613-50352810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
23, 165
               

               
Conread position:
               
1-206
               

               
Cow position:
               
chr2:30639940-30640142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
188, 42
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:11734261-11734475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
91, 22
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:43835814-43835602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
169, 142
               

               
Conread position:
               
1-211
               

               
Cow position:
               
chr2:55480489-55480282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
30, 82
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr2:31783691-31783899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr2:47066831-47066617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 103
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr2:1303701-1303914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 20
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr2:29268813-29269024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
166, 10
               

               
Conread position:
               
1-218
               

               
Cow position:
               
chr2:41057753-41057548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr2:8295583-8295791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr2:70945147-70945371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
17, 120
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:21284686-21284902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:24709594-24709373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 170
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:45575247-45575028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 100
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:46312200-46312421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 105
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:64830604-64830817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
18, 81
               

               
Conread position:
               
1-220
               

               
Cow position:
               
chr2:76969429-76969209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 191
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:80210-79991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
20, 43
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:40691237-40691458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 109
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:42800796-42801012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
169, 26
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:42938551-42938330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 127
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr2:47877728-47877943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
18, 82
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:21171147-21171352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
22, 94
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:21416062-21416277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:26501191-26500964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:32417108-32416889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 50
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:41185220-41185442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
17, 9
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:45619646-45619429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
19, 106
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:46202017-46202237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 202
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:51594514-51594734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
18, 119
               

               
Conread position:
               
1-222
               

               
Cow position:
               
chr2:80797424-80797640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
22, 99
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:21383108-21382880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:39376101-39376317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
151, 83
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:74260208-74260429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 64
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr2:85930206-85930431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
20, 101
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr2:32114814-32115050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-224
               

               
Cow position:
               
chr2:42927702-42927475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:988440-988666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
21, 31
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:2673274-2673499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 22
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:4254787-4254562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 128
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:14089529-14089765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:33262867-33262640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 57
               

               
Conread position:
               
1-225
               

               
Cow position:
               
chr2:39815537-39815311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 181
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr2:18858385-18858166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr2:36878469-36878238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
22, 181
               

               
Conread position:
               
1-235
               

               
Cow position:
               
chr2:62239343-62239586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 225
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr2:56828819-56828583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr2:66615170-66614926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 219
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr2:13684455-13684687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 121
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr2:36423763-36423996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
17, 90
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr2:38628657-38628897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 80
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr2:41248317-41248555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
19, 48
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr2:41451979-41452222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr2:54789528-54789763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
21, 42
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr2:77377985-77378233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 227
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr2:55877149-55877378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
188, 25
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr2:63274208-63273955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:1300630-1300401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
169, 22
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:1658248-1658486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 81
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:6951959-6952186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 82
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:15568436-15568191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
22, 97
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:15815339-15815578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 167
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:16422303-16422545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 44
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:20947122-20947363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
223, 58
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:33554411-33554180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:39584200-39584439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:43578048-43577807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
18, 94
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:43994683-43994925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 166
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:44170305-44170549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 235
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:44191233-44191470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 37
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:45499448-45499212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:45784485-45784727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:45912889-45912642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
65, 56
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:46245689-46245442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 57
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:46262193-46262431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:46357594-46357826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
22, 81
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:46995003-46994766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 22
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:47116164-47115929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
22, 98
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:48069653-48069408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 36
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:50277771-50278015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
143, 22
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:52344511-52344749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 81
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:53649775-53650014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 27
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:55527013-55526769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 5
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:62744258-62744018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 47
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:63568121-63568357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
167, 85
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:68488260-68488014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 216
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:71437635-71437388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
24, 215
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:73095035-73094797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 84
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:75561586-75561829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 189
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:80325099-80324862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
166, 87
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:81388439-81388683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 100
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:82581182-82580938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 82
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr2:84480771-84480511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
20, 229
               

               
Conread position:
               
2-193
               

               
Cow position:
               
chr2:1203430-1203624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr2:21644703-21644483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
22, 164
               

               
Conread position:
               
2-219
               

               
Cow position:
               
chr2:46189340-46189132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
164, 21
               

               
Conread position:
               
2-221
               

               
Cow position:
               
chr2:28820113-28820332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
2-237
               

               
Cow position:
               
chr2:80242439-80242205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
138, 21
               

               
Conread position:
               
2-238
               

               
Cow position:
               
chr2:6539487-6539254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 21
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr2:48361319-48361561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 20
               

               
Conread position:
               
2-242
               

               
Cow position:
               
chr2:77467707-77467460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
16, 197
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr2:24393939-24393699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 169
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr2:42226516-42226276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 21
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr2:61187374-61187135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
16, 94
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr2:61974544-61974790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 230
               

               
Conread position:
               
3-214
               

               
Cow position:
               
chr2:27600794-27600580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 169
               

               
Conread position:
               
3-217
               

               
Cow position:
               
chr2:76183052-76182849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
142, 20
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr2:9173510-9173305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
30, 81
               

               
Conread position:
               
3-220
               

               
Cow position:
               
chr2:47138588-47138809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
3-221
               

               
Cow position:
               
chr2:66916972-66916748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
117, 132
               

               
Conread position:
               
3-230
               

               
Cow position:
               
chr2:16514543-16514763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
72, 20
               

               
Conread position:
               
3-231
               

               
Cow position:
               
chr2:36056046-36055824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 87
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr2:19287326-19287092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr2:45665784-45666023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
164, 19
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr2:46227218-46227450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
4-228
               

               
Cow position:
               
chr2:42872019-42872249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
4-237
               

               
Cow position:
               
chr2:14555999-14555769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
4-242
               

               
Cow position:
               
chr2:53851185-53851425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 212
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr2:39590008-39590244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
5-244
               

               
Cow position:
               
chr2:39597051-39597287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
13, 33
               

               
Conread position:
               
6-217
               

               
Cow position:
               
chr2:80115858-80116063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 91
               

               
Conread position:
               
6-232
               

               
Cow position:
               
chr2:41008510-41008296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
160, 88
               

               
Conread position:
               
7-221
               

               
Cow position:
               
chr2:42599684-42599901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
7-222
               

               
Cow position:
               
chr2:85339705-85339491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
162, 103
               

               
Conread position:
               
9-232
               

               
Cow position:
               
chr2:20933553-20933770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
23, 74
               

               
Conread position:
               
9-244
               

               
Cow position:
               
chr2:50777532-50777761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
15, 86
               

               
Conread position:
               
11-206
               

               
Cow position:
               
chr2:12185787-12185974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
133, 11
               

               
Conread position:
               
11-220
               

               
Cow position:
               
chr2:15059309-15059092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
11-244
               

               
Cow position:
               
chr2:64212803-64212566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
12-199
               

               
Cow position:
               
chr2:54253113-54253298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
14-236
               

               
Cow position:
               
chr2:41461126-41461348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
62, 201
               

               
Conread position:
               
14-244
               

               
Cow position:
               
chr2:24434527-24434289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
92, 184
               

               
Conread position:
               
14-244
               

               
Cow position:
               
chr2:69747857-69747626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 9
               

               
Conread position:
               
16-243
               

               
Cow position:
               
chr2:45535235-45535455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
152, 11
               

               
Conread position:
               
16-244
               

               
Cow position:
               
chr2:17114971-17114738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
17-200
               

               
Cow position:
               
chr2:69770269-69770451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
150, 77
               

               
Conread position:
               
17-219
               

               
Cow position:
               
chr2:85281346-85281149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
153, 25
               

               
Conread position:
               
17-220
               

               
Cow position:
               
chr2:30389155-30389346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
17-221
               

               
Cow position:
               
chr2:11599206-11599405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
154, 81
               

               
Conread position:
               
17-221
               

               
Cow position:
               
chr2:15329168-15329361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
153, 65
               

               
Conread position:
               
17-222
               

               
Cow position:
               
chr2:15249949-15250149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
153, 79
               

               
Conread position:
               
17-233
               

               
Cow position:
               
chr2:32393184-32393393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
149, 25
               

               
Conread position:
               
17-233
               

               
Cow position:
               
chr2:41088363-41088133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
17-239
               

               
Cow position:
               
chr2:36017648-36017428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
150, 89
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr2:7534007-7533776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 158
               

               
Conread position:
               
17-244
               

               
Cow position:
               
chr2:40313137-40313361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
203, 16
               

               
Conread position:
               
19-241
               

               
Cow position:
               
chr2:46033099-46033322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
149, 35
               

               
Conread position:
               
19-244
               

               
Cow position:
               
chr2:68716901-68716678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 81
               

               
Conread position:
               
20-236
               

               
Cow position:
               
chr2:25597721-25597511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
147, 74
               

               
Conread position:
               
20-244
               

               
Cow position:
               
chr2:54970953-54971166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
196, 62
               

               
Conread position:
               
24-244
               

               
Cow position:
               
chr2:80275519-80275303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
144, 70
               

               
Conread position:
               
27-221
               

               
Cow position:
               
chr2:60463040-60462851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
27-221
               

               
Cow position:
               
chr2:60468419-60468230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
144, 65
               

               
Conread position:
               
28-221
               

               
Cow position:
               
chr2:19597570-19597766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
29-211
               

               
Cow position:
               
chr2:23848043-23847868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
141, 61
               

               
Conread position:
               
29-244
               

               
Cow position:
               
chr2:38362594-38362375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
31-213
               

               
Cow position:
               
chr2:47119405-47119589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
135, 75
               

               
Conread position:
               
35-244
               

               
Cow position:
               
chr2:46375146-46374948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
132, 75
               

               
Conread position:
               
38-241
               

               
Cow position:
               
chr2:42936426-42936222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
132, 44
               

               
Conread position:
               
42-244
               

               
Cow position:
               
chr2:44051094-44051301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 188
               

               
Conread position:
               
44-243
               

               
Cow position:
               
chr2:46111592-46111382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
45-243
               

               
Cow position:
               
chr2:18250102-18249902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
46-211
               

               
Cow position:
               
chr2:41443201-41443364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
97, 11
               

               
Conread position:
               
47-240
               

               
Cow position:
               
chr2:46120841-46120654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
37, 98
               

               
Conread position:
               
48-222
               

               
Cow position:
               
chr2:40484724-40484550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
118, 33
               

               
Conread position:
               
48-244
               

               
Cow position:
               
chr2:24007221-24007414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
123, 54
               

               
Conread position:
               
49-244
               

               
Cow position:
               
chr2:71622254-71622057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
116, 76
               

               
Conread position:
               
50-217
               

               
Cow position:
               
chr2:7383882-7383714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
93, 60
               

               
Conread position:
               
50-222
               

               
Cow position:
               
chr2:37787366-37787195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 115
               

               
Conread position:
               
50-239
               

               
Cow position:
               
chr2:40488610-40488798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
56, 119
               

               
Conread position:
               
50-240
               

               
Cow position:
               
chr2:43789904-43790086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
117, 42
               

               
Conread position:
               
50-244
               

               
Cow position:
               
chr2:4655301-4655104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
53-244
               

               
Cow position:
               
chr2:1638400-1638594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
56-242
               

               
Cow position:
               
chr2:827806-827628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
56-244
               

               
Cow position:
               
chr2:29121691-29121873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
133, 40
               

               
Conread position:
               
59-217
               

               
Cow position:
               
chr2:17493515-17493351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
61-244
               

               
Cow position:
               
chr2:70495081-70495263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
106, 49
               

               
Conread position:
               
62-244
               

               
Cow position:
               
chr2:1762600-1762785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
63, 142
               

               
Conread position:
               
62-244
               

               
Cow position:
               
chr2:30586420-30586601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
105, 44
               

               
Conread position:
               
65-237
               

               
Cow position:
               
chr2:73545084-73544910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
105, 98
               

               
Conread position:
               
68-230
               

               
Cow position:
               
chr2:46343326-46343164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
18, 105
               

               
Conread position:
               
73-244
               

               
Cow position:
               
chr2:19328368-19328537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
94, 29
               

               
Conread position:
               
82-244
               

               
Cow position:
               
chr2:30144553-30144708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 18
               

               
Conread position:
               
85-244
               

               
Cow position:
               
chr2:25448161-25448318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
82, 22
               

               
Conread position:
               
89-213
               

               
Cow position:
               
chr2:37373702-37373825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
100, 76
               

               
Conread position:
               
100-222
               

               
Cow position:
               
chr2:45542550-45542424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
100-222
               

               
Cow position:
               
chr2:46130304-46130180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
102-244
               

               
Cow position:
               
chr2:7573653-7573514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
57, 20
               

               
Conread position:
               
114-244
               

               
Cow position:
               
chr2:54810995-54810862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
123-244
               

               
Cow position:
               
chr2:47147777-47147898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
134-244
               

               
Cow position:
               
chr2:44222701-44222814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               
Show alignments to all cow chromosomes.