Cow genome map


           Conread name:
           rpigcf0_020330.y1
        

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               1-177
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               152
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 93
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               1-193
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               22, 89
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               23, 93
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               165, 22
               

               Conread position:
               1-216
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 94
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               168, 99
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               26, 130
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               20, 173
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 203
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 99
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 22
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               144, 101
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 73
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 178
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               18, 98
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               178
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 93
               

               Conread position:
               1-230
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               194, 85
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 90
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               185
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               189, 97
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 111
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 81
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 26
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               189, 68
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               164, 21
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 100
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 26
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 102
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 96
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               163, 118
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               23, 36
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               192, 81
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               184
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               166, 91
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               115, 95
               

               Conread position:
               2-219
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               17, 165
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               16, 81
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               169, 0
               

               Conread position:
               2-225
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               179
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               15, 163
               

               Conread position:
               3-219
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               174
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               18, 102
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               60, 24
               

               Conread position:
               3-230
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               164, 20
               

               Conread position:
               3-237
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               4-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               189
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               180, 10
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               164, 31
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               17, 54
               

               Conread position:
               7-220
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               170
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               158, 15
               

               Conread position:
               7-230
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               154
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               12, 21
               

               Conread position:
               7-233
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               16, 76
               

               Conread position:
               12-238
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               11, 156
               

               Conread position:
               12-242
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               17-180
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               17-221
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               164
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               153, 21
               

               Conread position:
               17-236
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               168, 75
               

               Conread position:
               17-238
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               66, 103
               

               Conread position:
               17-244
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               80, 84
               

               Conread position:
               17-244
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               149, 42
               

               Conread position:
               19-244
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 23
               

               Conread position:
               21-214
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               160
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 121
               

               Conread position:
               24-225
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               166, 72
               

               Conread position:
               25-148
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               61, 74
               

               Conread position:
               25-220
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               186, 46
               

               Conread position:
               41-220
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               26, 112
               

               Conread position:
               42-244
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               10, 181
               

               Conread position:
               44-244
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               122, 22
               

               Conread position:
               50-214
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               50-222
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               52-220
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               56-200
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               89, 36
               

               Conread position:
               56-242
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               109, 173
               

               Conread position:
               60-244
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               127, 159
               

               Conread position:
               67-234
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               144, 39
               

               Conread position:
               76-244
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               127
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               90, 24
               

               Conread position:
               78-244
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               83-244
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               88-221
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               101-243
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               116-221
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               87
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               123-237
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               90
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               44, 0
               
Show alignments to all cow chromosomes.