Cow genome map


           Conread name:
           rpigcf0_020330.y1
        

               Conread position:
               1-152
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               17, 71
               

               Conread position:
               1-156
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               1-195
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               22, 94
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               17, 65
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               169, 22
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 95
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               165, 80
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               171
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               20, 166
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               25, 129
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               17, 48
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               173
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               22, 105
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 127
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               169, 22
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               176
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               169, 38
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 143
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               186, 77
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 42
               

               Conread position:
               1-236
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 232
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               18, 142
               

               Conread position:
               1-240
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               189, 100
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               208, 93
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 94
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               17, 171
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               23, 99
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 22
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               16, 182
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 154
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 75
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 88
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               166, 79
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               189, 80
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               17, 79
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 42
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 101
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 80
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 236
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               166, 32
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               17, 99
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               25, 86
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 45
               

               Conread position:
               2-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 22
               

               Conread position:
               2-219
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               137, 21
               

               Conread position:
               2-240
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               19, 81
               

               Conread position:
               2-242
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 97
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               190
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               24, 48
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               20, 91
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               3-238
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 216
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 227
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 114
               

               Conread position:
               4-242
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               4-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 129
               

               Conread position:
               5-211
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               95, 176
               

               Conread position:
               5-244
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               180
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               17, 143
               

               Conread position:
               7-220
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 104
               

               Conread position:
               9-217
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               5, 95
               

               Conread position:
               10-220
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               8, 73
               

               Conread position:
               11-215
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               128, 48
               

               Conread position:
               11-242
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               12, 84
               

               Conread position:
               12-244
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 100
               

               Conread position:
               18-220
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               6, 59
               

               Conread position:
               19-211
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               27-195
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               117
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               27-220
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               140, 22
               

               Conread position:
               27-222
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 61
               

               Conread position:
               27-244
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               140, 21
               

               Conread position:
               31-222
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               139, 51
               

               Conread position:
               32-173
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               134, 79
               

               Conread position:
               33-244
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 10
               

               Conread position:
               40-244
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               127, 41
               

               Conread position:
               43-242
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               5, 123
               

               Conread position:
               50-220
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               120, 78
               

               Conread position:
               50-225
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               31, 53
               

               Conread position:
               52-192
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               113, 0
               

               Conread position:
               53-244
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               117, 89
               

               Conread position:
               60-244
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               110, 22
               

               Conread position:
               62-217
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               132
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               65-244
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               145
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               102, 45
               

               Conread position:
               71-244
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               7, 40
               

               Conread position:
               82-244
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               90-214
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               94-235
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               76, 66
               

               Conread position:
               94-238
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               94-244
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               100-221
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               66, 0
               
Show alignments to all cow chromosomes.