Cow genome map
| Conread name: | rpigcf0_020330.y1 |
| Conread position: | 1-164 |
| Cow position: | chr26:10733019-10732870 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 1-204 |
| Cow position: | chr26:22116488-22116690 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 22, 111 |
| Conread position: | 1-206 |
| Cow position: | chr26:9082462-9082256 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 1-211 |
| Cow position: | chr26:7961402-7961607 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 169, 91 |
| Conread position: | 1-211 |
| Cow position: | chr26:8700285-8700072 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 22, 159 |
| Conread position: | 1-216 |
| Cow position: | chr26:3072198-3071986 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 1-217 |
| Cow position: | chr26:1329310-1329525 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-219 |
| Cow position: | chr26:33112619-33112399 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 30 |
| Conread position: | 1-220 |
| Cow position: | chr26:9104516-9104296 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 1-220 |
| Cow position: | chr26:9867349-9867133 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 170 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 166, 97 |
| Conread position: | 1-220 |
| Cow position: | chr26:20846388-20846611 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-221 |
| Cow position: | chr26:29332865-29333077 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 17, 55 |
| Conread position: | 1-221 |
| Cow position: | chr26:32013395-32013613 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 1-221 |
| Cow position: | chr26:35704150-35704372 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 171 |
| Conread position: | 1-222 |
| Cow position: | chr26:13706232-13706018 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 176 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 1-222 |
| Cow position: | chr26:25737236-25737460 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 1-222 |
| Cow position: | chr26:32652958-32652748 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 166, 20 |
| Conread position: | 1-224 |
| Cow position: | chr26:798533-798309 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 23, 109 |
| Conread position: | 1-230 |
| Cow position: | chr26:7103272-7103037 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-236 |
| Cow position: | chr26:12145339-12145120 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 168, 22 |
| Conread position: | 1-238 |
| Cow position: | chr26:9632604-9632372 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 23, 32 |
| Conread position: | 1-239 |
| Cow position: | chr26:19459437-19459690 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 186 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 23, 127 |
| Conread position: | 1-240 |
| Cow position: | chr26:6475662-6475425 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 169, 91 |
| Conread position: | 1-242 |
| Cow position: | chr26:13021384-13021141 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 233 |
| Conread position: | 1-244 |
| Cow position: | chr26:7525703-7525467 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-244 |
| Cow position: | chr26:25393795-25394039 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 1-244 |
| Cow position: | chr26:26888369-26888127 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 184 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 22, 154 |
| Conread position: | 1-244 |
| Cow position: | chr26:27491738-27491492 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 26 |
| Conread position: | 1-244 |
| Cow position: | chr26:32898106-32897863 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 94 |
| Conread position: | 2-222 |
| Cow position: | chr26:6793906-6794135 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 2-244 |
| Cow position: | chr26:31779240-31779488 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 16, 127 |
| Conread position: | 3-192 |
| Cow position: | chr26:4599044-4598854 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 15, 160 |
| Conread position: | 3-193 |
| Cow position: | chr26:18918303-18918121 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 168, 103 |
| Conread position: | 3-193 |
| Cow position: | chr26:31061967-31062156 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 3-220 |
| Cow position: | chr26:32955857-32955648 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 20, 78 |
| Conread position: | 3-225 |
| Cow position: | chr26:1587371-1587583 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 143, 24 |
| Conread position: | 3-238 |
| Cow position: | chr26:24280596-24280824 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 20, 92 |
| Conread position: | 3-242 |
| Cow position: | chr26:16783589-16783828 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 20, 55 |
| Conread position: | 5-225 |
| Cow position: | chr26:28760317-28760104 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 18, 38 |
| Conread position: | 6-220 |
| Cow position: | chr26:20129905-20129686 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 17, 161 |
| Conread position: | 6-244 |
| Cow position: | chr26:5306902-5307149 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 7-242 |
| Cow position: | chr26:9491699-9491930 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 59 |
| Conread position: | 12-219 |
| Cow position: | chr26:31605184-31605389 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 151, 69 |
| Conread position: | 13-244 |
| Cow position: | chr26:15200739-15200508 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 181 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 126, 68 |
| Conread position: | 17-215 |
| Cow position: | chr26:22622765-22622965 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 131, 77 |
| Conread position: | 19-214 |
| Cow position: | chr26:33857414-33857216 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 25-223 |
| Cow position: | chr26:30128229-30128036 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 158 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 141, 75 |
| Conread position: | 40-242 |
| Cow position: | chr26:17148505-17148712 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 163 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 42-244 |
| Cow position: | chr26:22892633-22892439 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 82, 26 |
| Conread position: | 49-244 |
| Cow position: | chr26:14175095-14175288 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 118, 30 |
| Conread position: | 59-224 |
| Cow position: | chr26:23315590-23315759 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 59-239 |
| Cow position: | chr26:35448887-35449060 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 112, 23 |
| Conread position: | 82-244 |
| Cow position: | chr26:23583103-23582939 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 83, 137 |
| Conread position: | 92-234 |
| Cow position: | chr26:28251000-28251149 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 19 |
| Conread position: | 96-244 |
| Cow position: | chr26:12964839-12964688 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 96-244 |
| Cow position: | chr26:33736693-33736548 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 94, 37 |
| Conread position: | 123-241 |
| Cow position: | chr26:8341339-8341458 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 44, 30 |
Show alignments to all cow chromosomes.