Cow genome map


           Conread name:
           rpigcf0_020330.y1
        

               Conread position:
               1-205
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               24, 82
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 145
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               139, 80
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               28, 209
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               22, 110
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               17, 82
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 201
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 147
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               177
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 99
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 22
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 25
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               141, 87
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               186, 100
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               23, 126
               

               Conread position:
               1-223
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               211, 93
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               175
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               24, 184
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               188, 153
               

               Conread position:
               1-233
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               188, 14
               

               Conread position:
               1-237
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               186
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               166, 23
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               23, 111
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               181
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               19, 158
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               189, 132
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               186
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               166, 190
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 22
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               17, 11
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 30
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               22, 84
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 101
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 92
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               18, 57
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 179
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               2-190
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               164, 94
               

               Conread position:
               2-218
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               168, 21
               

               Conread position:
               2-223
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 70
               

               Conread position:
               2-223
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               21, 147
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               17, 52
               

               Conread position:
               3-215
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               15, 98
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               179
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 0
               

               Conread position:
               3-223
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 178
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               16, 37
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               212, 20
               

               Conread position:
               4-202
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               66, 26
               

               Conread position:
               4-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 95
               

               Conread position:
               5-244
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 74
               

               Conread position:
               6-217
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               162
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               6-237
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 89
               

               Conread position:
               7-178
               

               Cow position:
               
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               7-200
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 32
               

               Conread position:
               7-239
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               14, 78
               

               Conread position:
               7-243
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               17, 185
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               14, 25
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               159, 16
               

               Conread position:
               8-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 97
               

               Conread position:
               9-211
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               97, 14
               

               Conread position:
               12-244
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               17-219
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               127, 19
               

               Conread position:
               17-235
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               149, 77
               

               Conread position:
               18-221
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               18-244
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               172
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               153, 76
               

               Conread position:
               23-244
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               166, 193
               

               Conread position:
               36-244
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               130, 184
               

               Conread position:
               37-244
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               183, 52
               

               Conread position:
               42-173
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               46-244
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               120, 11
               

               Conread position:
               47-244
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               52-244
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               56-188
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               114, 37
               

               Conread position:
               62-197
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               103, 28
               

               Conread position:
               64-244
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               98, 140
               

               Conread position:
               66-220
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               126
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               102, 40
               

               Conread position:
               67-244
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               139
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               68-244
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               139
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               77-244
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               84-220
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               82, 16
               

               Conread position:
               85-242
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               120
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               87, 31
               

               Conread position:
               103-244
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               66, 27
               

               Conread position:
               105-244
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               61, 126
               

               Conread position:
               111-220
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               123-244
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               47, 0
               
Show alignments to all cow chromosomes.