Cow genome map


           Conread name:
           rpigcf0_020330.y1
        

               Conread position:
               1-164
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 55
               

               Conread position:
               1-185
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               152
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               1-203
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               17, 37
               

               Conread position:
               1-208
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 97
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               18, 59
               

               Conread position:
               1-217
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               154, 95
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               140, 22
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               178
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               17, 121
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               20, 79
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               177
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               17, 44
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               167, 22
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               79, 31
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               187, 101
               

               Conread position:
               1-225
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               22, 30
               

               Conread position:
               1-231
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               184
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 80
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               17, 160
               

               Conread position:
               1-232
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               20, 55
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               19, 80
               

               Conread position:
               1-235
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 81
               

               Conread position:
               1-238
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               185
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               22, 8
               

               Conread position:
               1-241
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               191
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               22, 32
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               166, 79
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               194
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 223
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               20, 168
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               169, 33
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 14
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 107
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               166, 22
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 135
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               167, 31
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 65
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               25, 102
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 41
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 226
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 170
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               66, 179
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               76, 110
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               166, 104
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 109
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 168
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               51, 86
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               19, 82
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               17, 27
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               19, 55
               

               Conread position:
               2-181
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               16, 92
               

               Conread position:
               2-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               2-243
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 78
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               21, 169
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               196
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 82
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               185, 92
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               26, 88
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 175
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 45
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               188
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               3-212
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               21, 80
               

               Conread position:
               3-222
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               3-236
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               23, 72
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               7, 55
               

               Conread position:
               4-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 22
               

               Conread position:
               4-244
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               19, 40
               

               Conread position:
               5-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               109, 15
               

               Conread position:
               6-170
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 96
               

               Conread position:
               6-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               13, 142
               

               Conread position:
               6-228
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               17, 91
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 27
               

               Conread position:
               6-244
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 33
               

               Conread position:
               7-221
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               165
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               17, 211
               

               Conread position:
               7-239
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               16, 97
               

               Conread position:
               7-244
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               8-221
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               169
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               8-222
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               14, 91
               

               Conread position:
               9-214
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               136, 70
               

               Conread position:
               10-206
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               166
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               10-241
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 154
               

               Conread position:
               10-244
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               198
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               11-220
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               11-231
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               161
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               12-232
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               6, 64
               

               Conread position:
               13-221
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               174
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 64
               

               Conread position:
               16-221
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               158
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               128, 150
               

               Conread position:
               17-221
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               26, 69
               

               Conread position:
               17-222
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               17-232
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               168
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               149, 166
               

               Conread position:
               21-214
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               60, 22
               

               Conread position:
               27-215
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               139
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               128, 79
               

               Conread position:
               28-244
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               141, 201
               

               Conread position:
               35-236
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               37-223
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               130, 140
               

               Conread position:
               47-222
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               145
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               120, 157
               

               Conread position:
               47-232
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               48-244
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               26, 38
               

               Conread position:
               49-220
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               56-244
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               151
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               112, 136
               

               Conread position:
               57-214
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               131, 49
               

               Conread position:
               60-220
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               26, 123
               

               Conread position:
               61-222
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               59, 106
               

               Conread position:
               62-221
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               105, 25
               

               Conread position:
               81-222
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               85-223
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               92-242
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               74, 8
               

               Conread position:
               96-221
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               59, 20
               

               Conread position:
               106-244
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 80
               

               Conread position:
               129-244
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               41, 101
               
Show alignments to all cow chromosomes.