Cow genome map
Conread name: | rpigcf0_020330.y1 |
Conread position: | 1-156 |
Cow position: | chr29:21665717-21665869 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 128 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 23, 81 |
Conread position: | 1-172 |
Cow position: | chr29:40902972-40902804 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 129 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 22, 27 |
Conread position: | 1-178 |
Cow position: | chr29:18085337-18085512 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 144 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 17, 115 |
Conread position: | 1-206 |
Cow position: | chr29:17109717-17109919 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 165 |
Alignm E-value: | 5e-38 |
Alignm gaps (pig, cow): | 18, 95 |
Conread position: | 1-209 |
Cow position: | chr29:27007865-27008071 (view UCSC Genome Browser custom track) |
Alignm length: | 212 |
Alignm identity: | 152 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 20, 94 |
Conread position: | 1-210 |
Cow position: | chr29:961666-961880 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 159 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 16, 106 |
Conread position: | 1-211 |
Cow position: | chr29:29477285-29477077 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 150 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 20, 82 |
Conread position: | 1-212 |
Cow position: | chr29:34745907-34745703 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 163 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 69, 82 |
Conread position: | 1-213 |
Cow position: | chr29:18878754-18878539 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 156 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 1-214 |
Cow position: | chr29:4804980-4805192 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 164 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 23, 106 |
Conread position: | 1-218 |
Cow position: | chr29:29475500-29475289 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 148 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 188, 56 |
Conread position: | 1-219 |
Cow position: | chr29:4625246-4625032 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 168 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 23, 71 |
Conread position: | 1-219 |
Cow position: | chr29:15738597-15738377 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 160 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 18, 42 |
Conread position: | 1-220 |
Cow position: | chr29:94798-94588 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 169 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 142, 22 |
Conread position: | 1-220 |
Cow position: | chr29:11684759-11684972 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 164 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 18, 104 |
Conread position: | 1-220 |
Cow position: | chr29:15944316-15944536 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 164 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 17, 100 |
Conread position: | 1-220 |
Cow position: | chr29:25088500-25088716 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 163 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 22, 82 |
Conread position: | 1-221 |
Cow position: | chr29:26734780-26734995 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 168 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 21, 82 |
Conread position: | 1-221 |
Cow position: | chr29:36530610-36530833 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1-222 |
Cow position: | chr29:585029-585243 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 166 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 169, 93 |
Conread position: | 1-222 |
Cow position: | chr29:10456805-10456591 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 166, 81 |
Conread position: | 1-222 |
Cow position: | chr29:13553879-13554103 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 168 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 22, 100 |
Conread position: | 1-222 |
Cow position: | chr29:25333706-25333495 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 166 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 83, 110 |
Conread position: | 1-224 |
Cow position: | chr29:28868378-28868606 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 176 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 1-239 |
Cow position: | chr29:8926712-8926483 (view UCSC Genome Browser custom track) |
Alignm length: | 242 |
Alignm identity: | 187 |
Alignm E-value: | 9.94922e-44 |
Alignm gaps (pig, cow): | 17, 149 |
Conread position: | 1-242 |
Cow position: | chr29:11634569-11634810 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 170 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 21, 57 |
Conread position: | 1-242 |
Cow position: | chr29:45005869-45005642 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 185 |
Alignm E-value: | 2e-39 |
Alignm gaps (pig, cow): | 169, 22 |
Conread position: | 1-243 |
Cow position: | chr29:10838697-10838941 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 175 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 16, 94 |
Conread position: | 1-244 |
Cow position: | chr29:465655-465405 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 182 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 17, 166 |
Conread position: | 1-244 |
Cow position: | chr29:4480425-4480183 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 25 |
Conread position: | 1-244 |
Cow position: | chr29:9709446-9709681 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 191 |
Alignm E-value: | 4.2039e-45 |
Alignm gaps (pig, cow): | 165, 74 |
Conread position: | 1-244 |
Cow position: | chr29:10058780-10058548 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 177 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 22, 81 |
Conread position: | 1-244 |
Cow position: | chr29:22613182-22613417 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 188 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 166, 20 |
Conread position: | 1-244 |
Cow position: | chr29:23874203-23874447 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 174 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 19, 131 |
Conread position: | 1-244 |
Cow position: | chr29:26778631-26778870 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 186 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 22, 147 |
Conread position: | 1-244 |
Cow position: | chr29:31594368-31594140 (view UCSC Genome Browser custom track) |
Alignm length: | 248 |
Alignm identity: | 186 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 18, 81 |
Conread position: | 1-244 |
Cow position: | chr29:32290349-32290596 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 177 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 17, 96 |
Conread position: | 1-244 |
Cow position: | chr29:35501901-35501667 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 185 |
Alignm E-value: | 3.00004e-41 |
Alignm gaps (pig, cow): | 169, 97 |
Conread position: | 1-244 |
Cow position: | chr29:41811830-41811600 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 187 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 187, 73 |
Conread position: | 2-219 |
Cow position: | chr29:21000389-21000608 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 58 |
Conread position: | 2-221 |
Cow position: | chr29:29974789-29975010 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 21, 58 |
Conread position: | 2-242 |
Cow position: | chr29:17607164-17607403 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 164 |
Conread position: | 2-244 |
Cow position: | chr29:1556680-1556919 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 183 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 16, 95 |
Conread position: | 2-244 |
Cow position: | chr29:7408141-7407898 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 180 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 22, 145 |
Conread position: | 3-216 |
Cow position: | chr29:11562363-11562574 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 173 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 114 |
Conread position: | 3-220 |
Cow position: | chr29:5919576-5919356 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 168 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 15, 163 |
Conread position: | 3-221 |
Cow position: | chr29:28197259-28197041 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 172 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 21, 106 |
Conread position: | 3-239 |
Cow position: | chr29:40165991-40166222 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 181 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 20, 73 |
Conread position: | 3-244 |
Cow position: | chr29:4328183-4328405 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 183 |
Alignm E-value: | 1e-36 |
Alignm gaps (pig, cow): | 20, 40 |
Conread position: | 3-244 |
Cow position: | chr29:22162504-22162262 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 20, 98 |
Conread position: | 5-219 |
Cow position: | chr29:20903537-20903322 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 18, 141 |
Conread position: | 6-193 |
Cow position: | chr29:4691934-4691741 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 146 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 17, 148 |
Conread position: | 6-222 |
Cow position: | chr29:4065841-4066053 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 170 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 161, 5 |
Conread position: | 8-217 |
Cow position: | chr29:10235361-10235170 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 156 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 16, 48 |
Conread position: | 10-244 |
Cow position: | chr29:26615969-26615733 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 182 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 14, 91 |
Conread position: | 11-221 |
Cow position: | chr29:6472074-6472281 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 154 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 177, 11 |
Conread position: | 15-222 |
Cow position: | chr29:26986706-26986896 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 152 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 151, 16 |
Conread position: | 16-235 |
Cow position: | chr29:1395368-1395578 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 161 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 154, 52 |
Conread position: | 16-244 |
Cow position: | chr29:27858554-27858782 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 157 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 123, 64 |
Conread position: | 17-219 |
Cow position: | chr29:2623716-2623517 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 170, 148 |
Conread position: | 17-244 |
Cow position: | chr29:22714964-22714735 (view UCSC Genome Browser custom track) |
Alignm length: | 231 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 149, 197 |
Conread position: | 18-244 |
Cow position: | chr29:24103784-24103552 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 187 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 148, 185 |
Conread position: | 21-244 |
Cow position: | chr29:40763917-40763693 (view UCSC Genome Browser custom track) |
Alignm length: | 228 |
Alignm identity: | 164 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 98, 142 |
Conread position: | 23-235 |
Cow position: | chr29:39642946-39643156 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 168 |
Alignm E-value: | 8.00001e-42 |
Alignm gaps (pig, cow): | 116, 64 |
Conread position: | 30-177 |
Cow position: | chr29:23155027-23155172 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 135, 0 |
Conread position: | 30-217 |
Cow position: | chr29:40096733-40096927 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 148 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 31-211 |
Cow position: | chr29:2532839-2533016 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 141 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 158, 137 |
Conread position: | 36-244 |
Cow position: | chr29:28446477-28446261 (view UCSC Genome Browser custom track) |
Alignm length: | 217 |
Alignm identity: | 162 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 131, 0 |
Conread position: | 43-211 |
Cow position: | chr29:28166428-28166258 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 125 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 43-214 |
Cow position: | chr29:31489109-31489281 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 129 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 127, 42 |
Conread position: | 45-240 |
Cow position: | chr29:709331-709136 (view UCSC Genome Browser custom track) |
Alignm length: | 200 |
Alignm identity: | 143 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 102, 37 |
Conread position: | 56-244 |
Cow position: | chr29:9718970-9718780 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 143 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 56-244 |
Cow position: | chr29:25091912-25092101 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 144 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 110, 10 |
Conread position: | 62-225 |
Cow position: | chr29:32211251-32211087 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 139 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 63-244 |
Cow position: | chr29:44988972-44988795 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 140 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 77, 47 |
Conread position: | 65-198 |
Cow position: | chr29:39329786-39329652 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 106 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 102, 0 |
Conread position: | 65-211 |
Cow position: | chr29:4334539-4334683 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 119 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 80, 16 |
Conread position: | 76-244 |
Cow position: | chr29:27588743-27588911 (view UCSC Genome Browser custom track) |
Alignm length: | 171 |
Alignm identity: | 128 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 9, 25 |
Conread position: | 82-243 |
Cow position: | chr29:44682272-44682110 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 124 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 108, 84 |
Conread position: | 86-244 |
Cow position: | chr29:23244051-23243890 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 129 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 92-244 |
Cow position: | chr29:31674465-31674620 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 123 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 75, 0 |
Show alignments to all cow chromosomes.