Cow genome map


           Conread name:
           rpigcf0_020330.y1
        

               Conread position:
               1-156
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               23, 81
               

               Conread position:
               1-172
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               22, 27
               

               Conread position:
               1-178
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               17, 115
               

               Conread position:
               1-206
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               18, 95
               

               Conread position:
               1-209
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 94
               

               Conread position:
               1-210
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               1-211
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               20, 82
               

               Conread position:
               1-212
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               69, 82
               

               Conread position:
               1-213
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1-214
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               23, 106
               

               Conread position:
               1-218
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               188, 56
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               1-219
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               18, 42
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               142, 22
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               18, 104
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               17, 100
               

               Conread position:
               1-220
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 82
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               1-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               169, 93
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               166, 81
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               22, 100
               

               Conread position:
               1-222
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               83, 110
               

               Conread position:
               1-224
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               176
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               1-239
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               17, 149
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               21, 57
               

               Conread position:
               1-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               169, 22
               

               Conread position:
               1-243
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               16, 94
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               17, 166
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 25
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               191
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               165, 74
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 81
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               166, 20
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 131
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               22, 147
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               18, 81
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               17, 96
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               185
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               169, 97
               

               Conread position:
               1-244
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               187, 73
               

               Conread position:
               2-219
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 58
               

               Conread position:
               2-221
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 58
               

               Conread position:
               2-242
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 164
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               16, 95
               

               Conread position:
               2-244
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               22, 145
               

               Conread position:
               3-216
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 114
               

               Conread position:
               3-220
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               15, 163
               

               Conread position:
               3-221
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               21, 106
               

               Conread position:
               3-239
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               3-244
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 98
               

               Conread position:
               5-219
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 141
               

               Conread position:
               6-193
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               17, 148
               

               Conread position:
               6-222
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               161, 5
               

               Conread position:
               8-217
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               10-244
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 91
               

               Conread position:
               11-221
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               177, 11
               

               Conread position:
               15-222
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               151, 16
               

               Conread position:
               16-235
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               154, 52
               

               Conread position:
               16-244
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               123, 64
               

               Conread position:
               17-219
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               170, 148
               

               Conread position:
               17-244
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 197
               

               Conread position:
               18-244
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 185
               

               Conread position:
               21-244
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               98, 142
               

               Conread position:
               23-235
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               116, 64
               

               Conread position:
               30-177
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               30-217
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               31-211
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               158, 137
               

               Conread position:
               36-244
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               131, 0
               

               Conread position:
               43-211
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               43-214
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               127, 42
               

               Conread position:
               45-240
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               102, 37
               

               Conread position:
               56-244
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               56-244
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               110, 10
               

               Conread position:
               62-225
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               139
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               63-244
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               77, 47
               

               Conread position:
               65-198
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               65-211
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               76-244
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               9, 25
               

               Conread position:
               82-243
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               108, 84
               

               Conread position:
               86-244
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               92-244
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               75, 0
               
Show alignments to all cow chromosomes.