Cow genome map
| Conread name: | rpigcf0_020330.y1 |
| Conread position: | 1-168 |
| Cow position: | chr3:22908109-22907942 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 25, 115 |
| Conread position: | 1-175 |
| Cow position: | chr3:61262528-61262699 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-192 |
| Cow position: | chr3:53384558-53384370 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 71 |
| Conread position: | 1-200 |
| Cow position: | chr3:16004261-16004066 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 17, 78 |
| Conread position: | 1-206 |
| Cow position: | chr3:58383693-58383896 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 168 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-213 |
| Cow position: | chr3:49327669-49327878 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-213 |
| Cow position: | chr3:78076914-78077126 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 1-214 |
| Cow position: | chr3:26920622-26920846 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 22, 31 |
| Conread position: | 1-214 |
| Cow position: | chr3:28908470-28908266 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 82 |
| Conread position: | 1-214 |
| Cow position: | chr3:75711044-75711249 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 161, 66 |
| Conread position: | 1-216 |
| Cow position: | chr3:57763948-57764167 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-217 |
| Cow position: | chr3:53739466-53739245 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 168 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-218 |
| Cow position: | chr3:26065726-26065945 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 114 |
| Conread position: | 1-219 |
| Cow position: | chr3:74699670-74699451 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 22, 53 |
| Conread position: | 1-220 |
| Cow position: | chr3:15057873-15057665 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 176 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 1-220 |
| Cow position: | chr3:43007680-43007456 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 22, 167 |
| Conread position: | 1-220 |
| Cow position: | chr3:56582568-56582781 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-220 |
| Cow position: | chr3:70566013-70565794 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 1-220 |
| Cow position: | chr3:73764468-73764250 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 144, 30 |
| Conread position: | 1-221 |
| Cow position: | chr3:2397058-2396835 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-221 |
| Cow position: | chr3:29812969-29813191 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 110 |
| Conread position: | 1-222 |
| Cow position: | chr3:15229094-15228875 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 22, 102 |
| Conread position: | 1-222 |
| Cow position: | chr3:27544604-27544387 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 21, 94 |
| Conread position: | 1-222 |
| Cow position: | chr3:31501078-31501295 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 20 |
| Conread position: | 1-222 |
| Cow position: | chr3:49382677-49382893 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 19, 100 |
| Conread position: | 1-222 |
| Cow position: | chr3:53150052-53150273 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-222 |
| Cow position: | chr3:55733668-55733893 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 144, 42 |
| Conread position: | 1-222 |
| Cow position: | chr3:62826898-62826673 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-223 |
| Cow position: | chr3:9843309-9843535 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 0 |
| Conread position: | 1-223 |
| Cow position: | chr3:66292453-66292231 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 169, 112 |
| Conread position: | 1-225 |
| Cow position: | chr3:9663462-9663223 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 17, 191 |
| Conread position: | 1-225 |
| Cow position: | chr3:13248127-13247902 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 143 |
| Conread position: | 1-225 |
| Cow position: | chr3:38863838-38864063 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 21, 104 |
| Conread position: | 1-225 |
| Cow position: | chr3:75158090-75158310 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 17, 89 |
| Conread position: | 1-229 |
| Cow position: | chr3:23408617-23408399 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 165, 67 |
| Conread position: | 1-229 |
| Cow position: | chr3:45534574-45534345 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 172 |
| Conread position: | 1-229 |
| Cow position: | chr3:68708276-68708051 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 1-233 |
| Cow position: | chr3:31056277-31056048 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 165 |
| Conread position: | 1-233 |
| Cow position: | chr3:51255509-51255745 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 107 |
| Conread position: | 1-234 |
| Cow position: | chr3:26894393-26894619 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 93, 18 |
| Conread position: | 1-235 |
| Cow position: | chr3:55445092-55445321 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 139, 14 |
| Conread position: | 1-238 |
| Cow position: | chr3:68627950-68627725 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 1-239 |
| Cow position: | chr3:14465979-14465750 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 59 |
| Conread position: | 1-242 |
| Cow position: | chr3:26219336-26219088 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 1-242 |
| Cow position: | chr3:74233925-74234157 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 165, 21 |
| Conread position: | 1-243 |
| Cow position: | chr3:22676357-22676132 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 21, 48 |
| Conread position: | 1-243 |
| Cow position: | chr3:48362808-48363040 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 187 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 22, 51 |
| Conread position: | 1-243 |
| Cow position: | chr3:74533073-74533313 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 17, 181 |
| Conread position: | 1-244 |
| Cow position: | chr3:5374060-5374297 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 169, 21 |
| Conread position: | 1-244 |
| Cow position: | chr3:5851202-5850964 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 85, 81 |
| Conread position: | 1-244 |
| Cow position: | chr3:13353085-13353329 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 1-244 |
| Cow position: | chr3:15052212-15051983 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 1-244 |
| Cow position: | chr3:17222419-17222177 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 71 |
| Conread position: | 1-244 |
| Cow position: | chr3:19006392-19006623 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 22, 100 |
| Conread position: | 1-244 |
| Cow position: | chr3:19789394-19789149 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 172 |
| Conread position: | 1-244 |
| Cow position: | chr3:23944822-23945068 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 22, 86 |
| Conread position: | 1-244 |
| Cow position: | chr3:26682068-26681836 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 189, 116 |
| Conread position: | 1-244 |
| Cow position: | chr3:27274265-27274496 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 1-244 |
| Cow position: | chr3:29887699-29887456 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 77 |
| Conread position: | 1-244 |
| Cow position: | chr3:50069504-50069729 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 17, 75 |
| Conread position: | 1-244 |
| Cow position: | chr3:53112893-53113140 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 215 |
| Conread position: | 1-244 |
| Cow position: | chr3:53221744-53221977 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 1-244 |
| Cow position: | chr3:55190025-55189789 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 191 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 68, 82 |
| Conread position: | 1-244 |
| Cow position: | chr3:56059532-56059776 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 1-244 |
| Cow position: | chr3:59610991-59610753 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 165, 22 |
| Conread position: | 1-244 |
| Cow position: | chr3:59798979-59799213 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 80 |
| Conread position: | 1-244 |
| Cow position: | chr3:61191192-61190959 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 19, 80 |
| Conread position: | 1-244 |
| Cow position: | chr3:67704265-67704511 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 1-244 |
| Cow position: | chr3:74409220-74409450 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 167, 22 |
| Conread position: | 1-244 |
| Cow position: | chr3:75479737-75479968 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 22, 84 |
| Conread position: | 1-244 |
| Cow position: | chr3:78894589-78894360 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 22, 81 |
| Conread position: | 1-244 |
| Cow position: | chr3:80071842-80072094 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 2-219 |
| Cow position: | chr3:15158767-15158985 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 21, 95 |
| Conread position: | 2-242 |
| Cow position: | chr3:54945851-54946094 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 29 |
| Conread position: | 2-244 |
| Cow position: | chr3:39970146-39969898 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 232 |
| Conread position: | 3-180 |
| Cow position: | chr3:23417137-23416967 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-188 |
| Cow position: | chr3:8557054-8556875 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 15, 68 |
| Conread position: | 3-193 |
| Cow position: | chr3:72142-72328 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 3-199 |
| Cow position: | chr3:9116634-9116819 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 187, 86 |
| Conread position: | 3-214 |
| Cow position: | chr3:4457349-4457135 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 163 |
| Conread position: | 3-215 |
| Cow position: | chr3:73467346-73467562 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 20, 60 |
| Conread position: | 3-220 |
| Cow position: | chr3:45881636-45881848 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 172 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 23, 94 |
| Conread position: | 3-220 |
| Cow position: | chr3:53429164-53428961 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 76 |
| Conread position: | 3-222 |
| Cow position: | chr3:525081-525290 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 20, 80 |
| Conread position: | 3-222 |
| Cow position: | chr3:10347081-10347301 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 3-222 |
| Cow position: | chr3:22021246-22021029 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 20, 108 |
| Conread position: | 3-222 |
| Cow position: | chr3:37186563-37186772 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 3-225 |
| Cow position: | chr3:2630525-2630743 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 20, 84 |
| Conread position: | 3-240 |
| Cow position: | chr3:69750974-69750736 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 20, 81 |
| Conread position: | 3-241 |
| Cow position: | chr3:48530364-48530612 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 23, 92 |
| Conread position: | 3-243 |
| Cow position: | chr3:67044368-67044132 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 184, 22 |
| Conread position: | 3-244 |
| Cow position: | chr3:49793142-49793361 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 3-244 |
| Cow position: | chr3:53790817-53790570 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 228 |
| Conread position: | 3-244 |
| Cow position: | chr3:77496544-77496794 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 3-244 |
| Cow position: | chr3:81277977-81277733 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 108 |
| Conread position: | 3-244 |
| Cow position: | chr3:83474476-83474709 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 164, 13 |
| Conread position: | 4-242 |
| Cow position: | chr3:44932244-44932479 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 19 |
| Conread position: | 4-244 |
| Cow position: | chr3:31047214-31046978 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 18, 34 |
| Conread position: | 5-222 |
| Cow position: | chr3:74611291-74611510 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 17, 97 |
| Conread position: | 6-222 |
| Cow position: | chr3:84000342-84000561 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 17, 95 |
| Conread position: | 6-231 |
| Cow position: | chr3:35283367-35283135 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 6-236 |
| Cow position: | chr3:20471629-20471405 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 139, 80 |
| Conread position: | 6-244 |
| Cow position: | chr3:45647405-45647645 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 6-244 |
| Cow position: | chr3:70899630-70899858 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 7-225 |
| Cow position: | chr3:58130731-58130941 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 17, 137 |
| Conread position: | 7-229 |
| Cow position: | chr3:68881378-68881159 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 159, 16 |
| Conread position: | 7-244 |
| Cow position: | chr3:7338042-7337817 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 7-244 |
| Cow position: | chr3:17451203-17450974 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 148 |
| Conread position: | 9-180 |
| Cow position: | chr3:22716548-22716379 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 9, 74 |
| Conread position: | 11-217 |
| Cow position: | chr3:82359785-82359983 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 134, 19 |
| Conread position: | 11-220 |
| Cow position: | chr3:73708785-73708991 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 159, 42 |
| Conread position: | 11-221 |
| Cow position: | chr3:58969161-58968955 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 12, 71 |
| Conread position: | 11-225 |
| Cow position: | chr3:57577430-57577646 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 132, 110 |
| Conread position: | 11-225 |
| Cow position: | chr3:60597283-60597490 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 12, 61 |
| Conread position: | 11-228 |
| Cow position: | chr3:13577449-13577235 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 159, 11 |
| Conread position: | 12-206 |
| Cow position: | chr3:66866661-66866470 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 124, 10 |
| Conread position: | 13-244 |
| Cow position: | chr3:15506186-15506414 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 12, 35 |
| Conread position: | 16-244 |
| Cow position: | chr3:8060873-8061094 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 154, 65 |
| Conread position: | 16-244 |
| Cow position: | chr3:39661707-39661483 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 128, 17 |
| Conread position: | 17-214 |
| Cow position: | chr3:71237899-71238094 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 150, 36 |
| Conread position: | 17-214 |
| Cow position: | chr3:75080508-75080705 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 177, 153 |
| Conread position: | 17-219 |
| Cow position: | chr3:43657971-43657765 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 17-236 |
| Cow position: | chr3:80655199-80655410 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 142, 84 |
| Conread position: | 17-244 |
| Cow position: | chr3:52607925-52608147 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 165 |
| Conread position: | 18-211 |
| Cow position: | chr3:22820312-22820503 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 150, 63 |
| Conread position: | 18-229 |
| Cow position: | chr3:74088431-74088217 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 126, 155 |
| Conread position: | 18-244 |
| Cow position: | chr3:56476425-56476647 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 149, 80 |
| Conread position: | 24-222 |
| Cow position: | chr3:52652325-52652136 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 164, 78 |
| Conread position: | 29-223 |
| Cow position: | chr3:83201774-83201577 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 29-243 |
| Cow position: | chr3:55836075-55835857 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 33-244 |
| Cow position: | chr3:13507221-13507433 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 53, 82 |
| Conread position: | 35-244 |
| Cow position: | chr3:12705799-12705578 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 37-187 |
| Cow position: | chr3:79196615-79196471 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 128, 5 |
| Conread position: | 37-194 |
| Cow position: | chr3:4861451-4861605 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 153, 59 |
| Conread position: | 42-225 |
| Cow position: | chr3:68156497-68156684 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 48, 81 |
| Conread position: | 51-244 |
| Cow position: | chr3:74754105-74754291 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 115, 30 |
| Conread position: | 58-244 |
| Cow position: | chr3:23105583-23105397 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 108, 22 |
| Conread position: | 60-219 |
| Cow position: | chr3:78896433-78896590 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 60-237 |
| Cow position: | chr3:70609407-70609585 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 150 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 107, 118 |
| Conread position: | 61-225 |
| Cow position: | chr3:10173349-10173184 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 109, 85 |
| Conread position: | 62-220 |
| Cow position: | chr3:10896615-10896776 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 110, 84 |
| Conread position: | 73-221 |
| Cow position: | chr3:7940758-7940610 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 94, 28 |
| Conread position: | 82-204 |
| Cow position: | chr3:77665973-77665851 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 85, 60 |
| Conread position: | 84-220 |
| Cow position: | chr3:60265436-60265297 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 83, 8 |
| Conread position: | 84-244 |
| Cow position: | chr3:74079834-74079671 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 90-244 |
| Cow position: | chr3:27212173-27212329 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 80, 23 |
| Conread position: | 94-221 |
| Cow position: | chr3:22924593-22924466 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 101 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 73, 118 |
| Conread position: | 94-222 |
| Cow position: | chr3:36418651-36418519 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 95-244 |
| Cow position: | chr3:34294469-34294317 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 95-244 |
| Cow position: | chr3:54506525-54506672 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 71, 84 |
| Conread position: | 99-222 |
| Cow position: | chr3:70762303-70762178 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 113 |
| Conread position: | 100-242 |
| Cow position: | chr3:76922842-76922696 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 113-244 |
| Cow position: | chr3:68616491-68616358 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 74, 57 |
Show alignments to all cow chromosomes.