Cow genome map
| Conread name: | rpigcf0_020330.y1 |
| Conread position: | 1-151 |
| Cow position: | chr5:19969258-19969107 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 1-185 |
| Cow position: | chr5:32153542-32153360 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 155 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 101 |
| Conread position: | 1-185 |
| Cow position: | chr5:66297012-66297194 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 1-193 |
| Cow position: | chr5:63917636-63917446 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 169, 109 |
| Conread position: | 1-198 |
| Cow position: | chr5:3281094-3280900 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 154, 36 |
| Conread position: | 1-200 |
| Cow position: | chr5:12672253-12672057 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 21, 81 |
| Conread position: | 1-203 |
| Cow position: | chr5:37814397-37814597 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 1-210 |
| Cow position: | chr5:27007672-27007880 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 146, 22 |
| Conread position: | 1-211 |
| Cow position: | chr5:4218651-4218854 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-211 |
| Cow position: | chr5:50975661-50975883 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 73, 21 |
| Conread position: | 1-214 |
| Cow position: | chr5:11229900-11229682 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 167 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-214 |
| Cow position: | chr5:74643887-74643684 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 169, 72 |
| Conread position: | 1-215 |
| Cow position: | chr5:30844886-30845099 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 5 |
| Conread position: | 1-215 |
| Cow position: | chr5:43738174-43737965 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 165, 10 |
| Conread position: | 1-217 |
| Cow position: | chr5:16894002-16893783 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-217 |
| Cow position: | chr5:56135195-56134978 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 1-218 |
| Cow position: | chr5:62870261-62870053 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 17, 32 |
| Conread position: | 1-218 |
| Cow position: | chr5:64321522-64321745 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 150 |
| Conread position: | 1-219 |
| Cow position: | chr5:60519940-60520155 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 1-219 |
| Cow position: | chr5:62172192-62172406 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 170 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 22, 82 |
| Conread position: | 1-220 |
| Cow position: | chr5:34915916-34916129 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 166, 104 |
| Conread position: | 1-220 |
| Cow position: | chr5:47601591-47601811 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 81 |
| Conread position: | 1-220 |
| Cow position: | chr5:55942624-55942404 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 1-220 |
| Cow position: | chr5:64524106-64523874 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 22, 45 |
| Conread position: | 1-221 |
| Cow position: | chr5:12352008-12351797 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 22, 62 |
| Conread position: | 1-221 |
| Cow position: | chr5:30276469-30276690 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 62, 13 |
| Conread position: | 1-222 |
| Cow position: | chr5:4797537-4797321 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 1-222 |
| Cow position: | chr5:32956316-32956101 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 167, 21 |
| Conread position: | 1-222 |
| Cow position: | chr5:57074561-57074339 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 112 |
| Conread position: | 1-222 |
| Cow position: | chr5:69337606-69337818 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 163, 12 |
| Conread position: | 1-223 |
| Cow position: | chr5:8821238-8821017 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 15, 9 |
| Conread position: | 1-223 |
| Cow position: | chr5:16206369-16206158 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 22, 42 |
| Conread position: | 1-223 |
| Cow position: | chr5:32697039-32696825 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 1-225 |
| Cow position: | chr5:34638659-34638882 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 98 |
| Conread position: | 1-231 |
| Cow position: | chr5:61656380-61656605 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 21, 96 |
| Conread position: | 1-231 |
| Cow position: | chr5:65593655-65593877 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 187, 11 |
| Conread position: | 1-231 |
| Cow position: | chr5:72150024-72150252 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 17, 83 |
| Conread position: | 1-233 |
| Cow position: | chr5:24996450-24996217 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 40 |
| Conread position: | 1-233 |
| Cow position: | chr5:45705821-45706050 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 1-236 |
| Cow position: | chr5:37714131-37713885 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-236 |
| Cow position: | chr5:49558933-49559178 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 17, 102 |
| Conread position: | 1-238 |
| Cow position: | chr5:53835489-53835723 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 5 |
| Conread position: | 1-240 |
| Cow position: | chr5:13536931-13537164 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 204, 81 |
| Conread position: | 1-242 |
| Cow position: | chr5:15598460-15598222 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 1-242 |
| Cow position: | chr5:30302672-30302909 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 1-242 |
| Cow position: | chr5:34288696-34288455 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 189 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 1-242 |
| Cow position: | chr5:38832891-38833136 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 1-242 |
| Cow position: | chr5:45845921-45845678 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 0 |
| Conread position: | 1-242 |
| Cow position: | chr5:50821562-50821797 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 59 |
| Conread position: | 1-243 |
| Cow position: | chr5:17027872-17028110 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 187, 14 |
| Conread position: | 1-243 |
| Cow position: | chr5:35684708-35684952 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 170 |
| Conread position: | 1-244 |
| Cow position: | chr5:6045060-6045309 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 1-244 |
| Cow position: | chr5:7193206-7193434 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 1-244 |
| Cow position: | chr5:9859944-9859696 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 1-244 |
| Cow position: | chr5:17087256-17087005 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 204 |
| Conread position: | 1-244 |
| Cow position: | chr5:20554975-20554731 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 168, 154 |
| Conread position: | 1-244 |
| Cow position: | chr5:20783402-20783635 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 166, 22 |
| Conread position: | 1-244 |
| Cow position: | chr5:21617229-21617473 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 92 |
| Conread position: | 1-244 |
| Cow position: | chr5:21828638-21828883 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 104 |
| Conread position: | 1-244 |
| Cow position: | chr5:22243011-22242757 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 35 |
| Conread position: | 1-244 |
| Cow position: | chr5:27015465-27015695 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 33 |
| Conread position: | 1-244 |
| Cow position: | chr5:30253519-30253756 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 170, 41 |
| Conread position: | 1-244 |
| Cow position: | chr5:32339201-32338950 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 102, 221 |
| Conread position: | 1-244 |
| Cow position: | chr5:34506152-34505911 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 1-244 |
| Cow position: | chr5:35826364-35826617 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 214 |
| Conread position: | 1-244 |
| Cow position: | chr5:40109275-40109508 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 17, 65 |
| Conread position: | 1-244 |
| Cow position: | chr5:43929960-43929720 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 98 |
| Conread position: | 1-244 |
| Cow position: | chr5:50533610-50533369 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 190 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 20, 89 |
| Conread position: | 1-244 |
| Cow position: | chr5:55967109-55966865 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 217 |
| Conread position: | 1-244 |
| Cow position: | chr5:56070627-56070874 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 27 |
| Conread position: | 1-244 |
| Cow position: | chr5:57626583-57626811 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-244 |
| Cow position: | chr5:57935340-57935093 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 217 |
| Conread position: | 1-244 |
| Cow position: | chr5:61725744-61725982 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 144, 134 |
| Conread position: | 1-244 |
| Cow position: | chr5:62826979-62826737 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 169, 95 |
| Conread position: | 1-244 |
| Cow position: | chr5:65588486-65588718 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 166, 20 |
| Conread position: | 1-244 |
| Cow position: | chr5:66257416-66257654 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 1-244 |
| Cow position: | chr5:72895466-72895701 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 82 |
| Conread position: | 2-194 |
| Cow position: | chr5:19813437-19813252 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 21, 41 |
| Conread position: | 2-222 |
| Cow position: | chr5:44848242-44848025 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 21, 78 |
| Conread position: | 2-223 |
| Cow position: | chr5:25231239-25231013 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 20, 184 |
| Conread position: | 2-244 |
| Cow position: | chr5:5111302-5111059 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 127 |
| Conread position: | 2-244 |
| Cow position: | chr5:25900089-25899854 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 63, 21 |
| Conread position: | 2-244 |
| Cow position: | chr5:35209697-35209459 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 164, 21 |
| Conread position: | 3-176 |
| Cow position: | chr5:15363666-15363841 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 3-206 |
| Cow position: | chr5:68871968-68872173 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 3-220 |
| Cow position: | chr5:56523950-56524162 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 56 |
| Conread position: | 3-226 |
| Cow position: | chr5:66119477-66119251 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 18, 144 |
| Conread position: | 3-244 |
| Cow position: | chr5:14314298-14314543 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 0 |
| Conread position: | 3-244 |
| Cow position: | chr5:74015716-74015957 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 75, 92 |
| Conread position: | 4-214 |
| Cow position: | chr5:75828957-75828753 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 164, 38 |
| Conread position: | 5-219 |
| Cow position: | chr5:1950282-1950069 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 161, 41 |
| Conread position: | 5-220 |
| Cow position: | chr5:56028752-56028535 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 0 |
| Conread position: | 6-220 |
| Cow position: | chr5:27492257-27492473 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 20 |
| Conread position: | 6-220 |
| Cow position: | chr5:67932682-67932473 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 164, 65 |
| Conread position: | 6-237 |
| Cow position: | chr5:43858649-43858423 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 6-244 |
| Cow position: | chr5:68718662-68718885 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 164, 74 |
| Conread position: | 9-222 |
| Cow position: | chr5:62142452-62142670 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 13, 86 |
| Conread position: | 9-228 |
| Cow position: | chr5:45036804-45037022 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 85 |
| Conread position: | 9-244 |
| Cow position: | chr5:65941472-65941235 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 10-244 |
| Cow position: | chr5:60126156-60126388 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 10-244 |
| Cow position: | chr5:63185469-63185237 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 176 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 180, 7 |
| Conread position: | 12-223 |
| Cow position: | chr5:8024407-8024197 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 11, 26 |
| Conread position: | 13-215 |
| Cow position: | chr5:35235923-35235719 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 10, 94 |
| Conread position: | 17-188 |
| Cow position: | chr5:35969333-35969500 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 144 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 153, 79 |
| Conread position: | 17-217 |
| Cow position: | chr5:26262883-26262686 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 153, 42 |
| Conread position: | 17-244 |
| Cow position: | chr5:17631079-17630858 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 195, 126 |
| Conread position: | 17-244 |
| Cow position: | chr5:18898774-18898991 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 153, 83 |
| Conread position: | 19-222 |
| Cow position: | chr5:51053855-51053654 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 170, 71 |
| Conread position: | 19-225 |
| Cow position: | chr5:7044918-7044709 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 13, 24 |
| Conread position: | 21-234 |
| Cow position: | chr5:8994771-8994560 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 164 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 148, 81 |
| Conread position: | 23-244 |
| Cow position: | chr5:23169022-23168811 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 166, 63 |
| Conread position: | 25-244 |
| Cow position: | chr5:44447089-44446851 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 28-239 |
| Cow position: | chr5:50943352-50943138 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 144, 191 |
| Conread position: | 29-223 |
| Cow position: | chr5:24485623-24485439 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 142, 52 |
| Conread position: | 29-244 |
| Cow position: | chr5:69731320-69731521 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 137, 53 |
| Conread position: | 31-244 |
| Cow position: | chr5:34561813-34562031 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 0 |
| Conread position: | 35-197 |
| Cow position: | chr5:6286618-6286456 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 131, 66 |
| Conread position: | 36-244 |
| Cow position: | chr5:69461144-69461348 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 131, 53 |
| Conread position: | 37-213 |
| Cow position: | chr5:66403954-66404123 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 152, 45 |
| Conread position: | 37-234 |
| Cow position: | chr5:57591501-57591697 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 107, 128 |
| Conread position: | 40-244 |
| Cow position: | chr5:6670384-6670178 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 126, 137 |
| Conread position: | 41-220 |
| Cow position: | chr5:46512952-46512770 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 18, 23 |
| Conread position: | 44-222 |
| Cow position: | chr5:17768326-17768149 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 123, 19 |
| Conread position: | 44-236 |
| Cow position: | chr5:57575583-57575778 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 153 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 46-222 |
| Cow position: | chr5:14629996-14629819 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 48-244 |
| Cow position: | chr5:44028480-44028288 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 144, 41 |
| Conread position: | 51-244 |
| Cow position: | chr5:45472090-45472297 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 90, 55 |
| Conread position: | 55-244 |
| Cow position: | chr5:41010168-41009978 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 153, 115 |
| Conread position: | 56-225 |
| Cow position: | chr5:56317124-56317296 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 58-243 |
| Cow position: | chr5:30950088-30949901 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 59-244 |
| Cow position: | chr5:41452834-41452650 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 128, 56 |
| Conread position: | 59-244 |
| Cow position: | chr5:56014567-56014746 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 60-244 |
| Cow position: | chr5:30629324-30629144 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 107, 22 |
| Conread position: | 61-243 |
| Cow position: | chr5:65967897-65967717 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 106, 126 |
| Conread position: | 66-230 |
| Cow position: | chr5:45397418-45397574 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 101, 28 |
| Conread position: | 66-238 |
| Cow position: | chr5:46426011-46425846 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 100, 28 |
| Conread position: | 71-243 |
| Cow position: | chr5:42050392-42050567 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 72-211 |
| Cow position: | chr5:35247265-35247129 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 71, 16 |
| Conread position: | 74-235 |
| Cow position: | chr5:37068739-37068899 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 114, 69 |
| Conread position: | 79-243 |
| Cow position: | chr5:63865644-63865812 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 84-244 |
| Cow position: | chr5:31144933-31144772 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 86, 58 |
| Conread position: | 85-222 |
| Cow position: | chr5:70952021-70951881 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 88-231 |
| Cow position: | chr5:25035384-25035238 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 79, 18 |
| Conread position: | 89-219 |
| Cow position: | chr5:64027149-64027016 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 102 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 90-236 |
| Cow position: | chr5:7755702-7755553 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 95-244 |
| Cow position: | chr5:38647224-38647370 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 72, 16 |
| Conread position: | 96-207 |
| Cow position: | chr5:991332-991446 (view UCSC Genome Browser custom track) |
| Alignm length: | 115 |
| Alignm identity: | 92 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 111-244 |
| Cow position: | chr5:49440991-49440856 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 123-221 |
| Cow position: | chr5:7697898-7697999 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 87 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 123-244 |
| Cow position: | chr5:60183694-60183818 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 125-244 |
| Cow position: | chr5:60016062-60016183 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 112 |
Show alignments to all cow chromosomes.