Cow genome map

Conread name: rpigcf0_020330.y1

Conread position: 1-192
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 22, 0

Conread position: 1-205
Cow position:
Alignm length: 208
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 25, 66

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 164
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 22, 82

Conread position: 1-213
Cow position:
Alignm length: 217
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 94

Conread position: 1-214
Cow position:
Alignm length: 217
Alignm identity: 171
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 164, 81

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 169
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 62, 22

Conread position: 1-214
Cow position:
Alignm length: 218
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 161

Conread position: 1-217
Cow position:
Alignm length: 218
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 20, 98

Conread position: 1-217
Cow position:
Alignm length: 220
Alignm identity: 164
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 156, 30

Conread position: 1-217
Cow position:
Alignm length: 221
Alignm identity: 169
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 165, 24

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 161
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 186, 16

Conread position: 1-219
Cow position:
Alignm length: 221
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 94

Conread position: 1-219
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 22, 104

Conread position: 1-219
Cow position:
Alignm length: 220
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 56

Conread position: 1-220
Cow position:
Alignm length: 223
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 23, 14

Conread position: 1-220
Cow position:
Alignm length: 221
Alignm identity: 175
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 165, 22

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 22, 100

Conread position: 1-220
Cow position:
Alignm length: 225
Alignm identity: 173
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 25, 96

Conread position: 1-220
Cow position:
Alignm length: 226
Alignm identity: 158
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 37

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 22, 96

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 174
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 20, 94

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 82

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 165, 26

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 86

Conread position: 1-223
Cow position:
Alignm length: 226
Alignm identity: 175
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 170, 24

Conread position: 1-223
Cow position:
Alignm length: 228
Alignm identity: 170
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 23, 82

Conread position: 1-225
Cow position:
Alignm length: 227
Alignm identity: 173
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 22, 90

Conread position: 1-230
Cow position:
Alignm length: 234
Alignm identity: 182
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 17, 46

Conread position: 1-233
Cow position:
Alignm length: 238
Alignm identity: 171
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 87

Conread position: 1-234
Cow position:
Alignm length: 240
Alignm identity: 187
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 138, 93

Conread position: 1-234
Cow position:
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 78

Conread position: 1-236
Cow position:
Alignm length: 241
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 228

Conread position: 1-238
Cow position:
Alignm length: 251
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 226

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 27

Conread position: 1-242
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 110

Conread position: 1-242
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 212

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 88

Conread position: 1-243
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 32, 168

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 102

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 22, 82

Conread position: 1-244
Cow position:
Alignm length: 253
Alignm identity: 192
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 112, 70

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 166

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 162

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 162

Conread position: 1-244
Cow position:
Alignm length: 263
Alignm identity: 195
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 12, 42

Conread position: 1-244
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 29, 0

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 81

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 166, 99

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 6, 0

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 101

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 165, 25

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 184
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 75

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 183
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 93

Conread position: 2-180
Cow position:
Alignm length: 182
Alignm identity: 143
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 16, 0

Conread position: 2-218
Cow position:
Alignm length: 219
Alignm identity: 172
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 20, 180

Conread position: 2-225
Cow position:
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 73

Conread position: 2-231
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 164, 77

Conread position: 2-239
Cow position:
Alignm length: 239
Alignm identity: 171
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 88

Conread position: 2-244
Cow position:
Alignm length: 248
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 76

Conread position: 3-214
Cow position:
Alignm length: 216
Alignm identity: 165
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 15, 8

Conread position: 3-218
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 162, 20

Conread position: 3-237
Cow position:
Alignm length: 239
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 18, 163

Conread position: 3-242
Cow position:
Alignm length: 241
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 167, 0

Conread position: 4-217
Cow position:
Alignm length: 217
Alignm identity: 159
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 92

Conread position: 4-219
Cow position:
Alignm length: 229
Alignm identity: 164
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 16, 79

Conread position: 4-221
Cow position:
Alignm length: 221
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 19

Conread position: 6-171
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 84

Conread position: 6-220
Cow position:
Alignm length: 222
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 14, 93

Conread position: 6-221
Cow position:
Alignm length: 228
Alignm identity: 165
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 6-244
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 15, 0

Conread position: 6-244
Cow position:
Alignm length: 243
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 5

Conread position: 8-244
Cow position:
Alignm length: 241
Alignm identity: 180
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 15, 71

Conread position: 12-217
Cow position:
Alignm length: 208
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 12-244
Cow position:
Alignm length: 236
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 11, 91

Conread position: 17-244
Cow position:
Alignm length: 231
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 99

Conread position: 18-220
Cow position:
Alignm length: 204
Alignm identity: 149
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 196, 17

Conread position: 24-220
Cow position:
Alignm length: 201
Alignm identity: 156
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 142, 0

Conread position: 27-191
Cow position:
Alignm length: 165
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 0

Conread position: 27-211
Cow position:
Alignm length: 186
Alignm identity: 138
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 143, 22

Conread position: 30-206
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 12, 0

Conread position: 30-244
Cow position:
Alignm length: 219
Alignm identity: 168
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 127, 66

Conread position: 35-242
Cow position:
Alignm length: 213
Alignm identity: 162
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 132, 79

Conread position: 37-244
Cow position:
Alignm length: 212
Alignm identity: 160
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 9, 191

Conread position: 42-244
Cow position:
Alignm length: 207
Alignm identity: 146
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 103, 9

Conread position: 50-220
Cow position:
Alignm length: 176
Alignm identity: 140
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 117, 44

Conread position: 52-244
Cow position:
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 119, 91

Conread position: 56-244
Cow position:
Alignm length: 192
Alignm identity: 153
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 111, 163

Conread position: 59-238
Cow position:
Alignm length: 185
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 23

Conread position: 63-242
Cow position:
Alignm length: 183
Alignm identity: 136
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 107, 31

Conread position: 64-230
Cow position:
Alignm length: 168
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 156, 36

Conread position: 65-244
Cow position:
Alignm length: 184
Alignm identity: 143
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 101, 166

Conread position: 79-244
Cow position:
Alignm length: 169
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 84-244
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 27

Conread position: 90-244
Cow position:
Alignm length: 159
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 93-244
Cow position:
Alignm length: 156
Alignm identity: 122
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 77, 7

Conread position: 129-244
Cow position:
Alignm length: 119
Alignm identity: 95
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 39, 72

Show alignments to all cow chromosomes.