Cow genome map
| Conread name: | rpigcf0_020330.y1 | 
| Conread position: | 1-192 | 
| Cow position: | chr6:55366535-55366339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 197 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 1-205 | 
| Cow position: | chr6:28811206-28811003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 25, 66 | 
| Conread position: | 1-211 | 
| Cow position: | chr6:35181465-35181262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 22, 82 | 
| Conread position: | 1-213 | 
| Cow position: | chr6:2012807-2013019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 94 | 
| Conread position: | 1-214 | 
| Cow position: | chr6:4383281-4383487 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 164, 81 | 
| Conread position: | 1-214 | 
| Cow position: | chr6:9736851-9736649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 62, 22 | 
| Conread position: | 1-214 | 
| Cow position: | chr6:38853870-38853654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 161 | 
| Conread position: | 1-217 | 
| Cow position: | chr6:8209801-8209595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 218 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 20, 98 | 
| Conread position: | 1-217 | 
| Cow position: | chr6:14839238-14839022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 156, 30 | 
| Conread position: | 1-217 | 
| Cow position: | chr6:52248345-52248127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 165, 24 | 
| Conread position: | 1-218 | 
| Cow position: | chr6:7824551-7824768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 161 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 186, 16 | 
| Conread position: | 1-219 | 
| Cow position: | chr6:38218460-38218675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 94 | 
| Conread position: | 1-219 | 
| Cow position: | chr6:53025010-53024800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 22, 104 | 
| Conread position: | 1-219 | 
| Cow position: | chr6:63406466-63406677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 220 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 98, 56 | 
| Conread position: | 1-220 | 
| Cow position: | chr6:2582663-2582878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-35 | 
| Alignm gaps (pig, cow): | 23, 14 | 
| Conread position: | 1-220 | 
| Cow position: | chr6:15305374-15305582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 165, 22 | 
| Conread position: | 1-220 | 
| Cow position: | chr6:21542108-21542327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 22, 100 | 
| Conread position: | 1-220 | 
| Cow position: | chr6:28977243-28977037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 25, 96 | 
| Conread position: | 1-220 | 
| Cow position: | chr6:52556686-52556467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 22, 37 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:13688023-13687805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 22, 96 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:17997527-17997307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 225 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 20, 94 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:20098176-20097956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 82 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:38771084-38771296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 165, 26 | 
| Conread position: | 1-222 | 
| Cow position: | chr6:49398828-49398605 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 86 | 
| Conread position: | 1-223 | 
| Cow position: | chr6:15923209-15922989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 170, 24 | 
| Conread position: | 1-223 | 
| Cow position: | chr6:30786360-30786144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 23, 82 | 
| Conread position: | 1-225 | 
| Cow position: | chr6:36196002-36196224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 22, 90 | 
| Conread position: | 1-230 | 
| Cow position: | chr6:899496-899274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 17, 46 | 
| Conread position: | 1-233 | 
| Cow position: | chr6:6264432-6264663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 60, 87 | 
| Conread position: | 1-234 | 
| Cow position: | chr6:16410984-16411214 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 138, 93 | 
| Conread position: | 1-234 | 
| Cow position: | chr6:54132606-54132832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 78 | 
| Conread position: | 1-236 | 
| Cow position: | chr6:60350511-60350274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 228 | 
| Conread position: | 1-238 | 
| Cow position: | chr6:52478639-52478393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 226 | 
| Conread position: | 1-241 | 
| Cow position: | chr6:8965878-8966119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 27 | 
| Conread position: | 1-242 | 
| Cow position: | chr6:32125855-32126091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 17, 110 | 
| Conread position: | 1-242 | 
| Cow position: | chr6:47540314-47540559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 212 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:44194757-44194521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 88 | 
| Conread position: | 1-243 | 
| Cow position: | chr6:45690805-45690574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 32, 168 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:5609652-5609416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 22, 102 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:7131083-7130859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 22, 82 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:18961734-18961486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 112, 70 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:23248175-23247933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 166 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:24961933-24962172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 162 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:31535782-31535540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 162 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:32287408-32287667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 12, 42 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:35613621-35613393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 29, 0 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:36202616-36202850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 22, 81 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:39358552-39358316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 166, 99 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:51581471-51581223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 0 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:53651828-53652070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 101 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:54991204-54990972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 165, 25 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:61269118-61269341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 19, 75 | 
| Conread position: | 1-244 | 
| Cow position: | chr6:67950747-67950984 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 22, 93 | 
| Conread position: | 2-180 | 
| Cow position: | chr6:20329810-20329991 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 2-218 | 
| Cow position: | chr6:24031164-24031376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 20, 180 | 
| Conread position: | 2-225 | 
| Cow position: | chr6:26728737-26728514 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 73 | 
| Conread position: | 2-231 | 
| Cow position: | chr6:10635966-10636193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 173 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 164, 77 | 
| Conread position: | 2-239 | 
| Cow position: | chr6:23532452-23532677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 171 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 20, 88 | 
| Conread position: | 2-244 | 
| Cow position: | chr6:17414664-17414418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 76 | 
| Conread position: | 3-214 | 
| Cow position: | chr6:1886872-1886663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 216 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 15, 8 | 
| Conread position: | 3-218 | 
| Cow position: | chr6:46570910-46571122 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 162, 20 | 
| Conread position: | 3-237 | 
| Cow position: | chr6:1907329-1907562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 239 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 18, 163 | 
| Conread position: | 3-242 | 
| Cow position: | chr6:130374-130134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 167, 0 | 
| Conread position: | 4-217 | 
| Cow position: | chr6:5114257-5114043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 217 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 33, 92 | 
| Conread position: | 4-219 | 
| Cow position: | chr6:16103411-16103188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 229 | 
| Alignm identity: | 164 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 16, 79 | 
| Conread position: | 4-221 | 
| Cow position: | chr6:6460333-6460551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 166, 19 | 
| Conread position: | 6-171 | 
| Cow position: | chr6:1002442-1002277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 170 | 
| Alignm identity: | 132 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 12, 84 | 
| Conread position: | 6-220 | 
| Cow position: | chr6:28080104-28079889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 14, 93 | 
| Conread position: | 6-221 | 
| Cow position: | chr6:31260780-31261007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 228 | 
| Alignm identity: | 165 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 6-244 | 
| Cow position: | chr6:14958556-14958313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 244 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 6-244 | 
| Cow position: | chr6:47519841-47520082 (view UCSC Genome Browser custom track) | 
| Alignm length: | 243 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 5 | 
| Conread position: | 8-244 | 
| Cow position: | chr6:29210296-29210526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 241 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 15, 71 | 
| Conread position: | 12-217 | 
| Cow position: | chr6:59069829-59069622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 208 | 
| Alignm identity: | 167 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 12-244 | 
| Cow position: | chr6:21231335-21231553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 236 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-34 | 
| Alignm gaps (pig, cow): | 11, 91 | 
| Conread position: | 17-244 | 
| Cow position: | chr6:16423504-16423731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 231 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 99 | 
| Conread position: | 18-220 | 
| Cow position: | chr6:29484897-29485094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 196, 17 | 
| Conread position: | 24-220 | 
| Cow position: | chr6:50577332-50577532 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 142, 0 | 
| Conread position: | 27-191 | 
| Cow position: | chr6:49410874-49410717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 165 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 54, 0 | 
| Conread position: | 27-211 | 
| Cow position: | chr6:24004363-24004539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 186 | 
| Alignm identity: | 138 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 143, 22 | 
| Conread position: | 30-206 | 
| Cow position: | chr6:35993394-35993577 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 12, 0 | 
| Conread position: | 30-244 | 
| Cow position: | chr6:47574723-47574935 (view UCSC Genome Browser custom track) | 
| Alignm length: | 219 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 127, 66 | 
| Conread position: | 35-242 | 
| Cow position: | chr6:1499461-1499671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 213 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 132, 79 | 
| Conread position: | 37-244 | 
| Cow position: | chr6:47640613-47640403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 3e-38 | 
| Alignm gaps (pig, cow): | 9, 191 | 
| Conread position: | 42-244 | 
| Cow position: | chr6:27888180-27888380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 103, 9 | 
| Conread position: | 50-220 | 
| Cow position: | chr6:12543095-12542924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 176 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 117, 44 | 
| Conread position: | 52-244 | 
| Cow position: | chr6:120079-120276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 199 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 119, 91 | 
| Conread position: | 56-244 | 
| Cow position: | chr6:61608351-61608541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 3.99931e-42 | 
| Alignm gaps (pig, cow): | 111, 163 | 
| Conread position: | 59-238 | 
| Cow position: | chr6:7128553-7128380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 185 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 108, 23 | 
| Conread position: | 63-242 | 
| Cow position: | chr6:9219124-9219299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 183 | 
| Alignm identity: | 136 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 107, 31 | 
| Conread position: | 64-230 | 
| Cow position: | chr6:46283146-46282990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 168 | 
| Alignm identity: | 129 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 156, 36 | 
| Conread position: | 65-244 | 
| Cow position: | chr6:57571326-57571508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 101, 166 | 
| Conread position: | 79-244 | 
| Cow position: | chr6:38640094-38640262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 169 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 86, 0 | 
| Conread position: | 84-244 | 
| Cow position: | chr6:12829354-12829196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 164 | 
| Alignm identity: | 123 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 103, 27 | 
| Conread position: | 90-244 | 
| Cow position: | chr6:37376643-37376485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 159 | 
| Alignm identity: | 116 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 77, 0 | 
| Conread position: | 93-244 | 
| Cow position: | chr6:11192588-11192435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 77, 7 | 
| Conread position: | 129-244 | 
| Cow position: | chr6:37332020-37332137 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 39, 72 | 
Show alignments to all cow chromosomes.
