Cow genome map

Conread name: rpigcf0_020330.y1

Conread position: 1-187
Cow position:
Alignm length: 189
Alignm identity: 150
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 101, 22

Conread position: 1-211
Cow position:
Alignm length: 218
Alignm identity: 165
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 22, 81

Conread position: 1-211
Cow position:
Alignm length: 214
Alignm identity: 166
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 22, 89

Conread position: 1-211
Cow position:
Alignm length: 212
Alignm identity: 157
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 145, 85

Conread position: 1-212
Cow position:
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 103

Conread position: 1-214
Cow position:
Alignm length: 216
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 110

Conread position: 1-217
Cow position:
Alignm length: 222
Alignm identity: 157
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 19, 92

Conread position: 1-217
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 188, 24

Conread position: 1-217
Cow position:
Alignm length: 219
Alignm identity: 171
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 144, 24

Conread position: 1-219
Cow position:
Alignm length: 225
Alignm identity: 176
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 166, 81

Conread position: 1-219
Cow position:
Alignm length: 222
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 92

Conread position: 1-219
Cow position:
Alignm length: 223
Alignm identity: 165
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 98

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 173
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 168, 147

Conread position: 1-220
Cow position:
Alignm length: 224
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 42

Conread position: 1-220
Cow position:
Alignm length: 226
Alignm identity: 167
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 103

Conread position: 1-220
Cow position:
Alignm length: 221
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 0

Conread position: 1-220
Cow position:
Alignm length: 222
Alignm identity: 166
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 0

Conread position: 1-221
Cow position:
Alignm length: 225
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 45

Conread position: 1-222
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 22, 97

Conread position: 1-222
Cow position:
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 35

Conread position: 1-223
Cow position:
Alignm length: 226
Alignm identity: 169
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 170, 67

Conread position: 1-224
Cow position:
Alignm length: 230
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 143, 0

Conread position: 1-225
Cow position:
Alignm length: 227
Alignm identity: 174
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 169, 22

Conread position: 1-225
Cow position:
Alignm length: 230
Alignm identity: 155
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 19, 164

Conread position: 1-231
Cow position:
Alignm length: 238
Alignm identity: 174
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 19, 37

Conread position: 1-236
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 43

Conread position: 1-236
Cow position:
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 1-237
Cow position:
Alignm length: 241
Alignm identity: 177
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 20, 0

Conread position: 1-238
Cow position:
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 84

Conread position: 1-239
Cow position:
Alignm length: 250
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 22, 81

Conread position: 1-239
Cow position:
Alignm length: 243
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 74

Conread position: 1-239
Cow position:
Alignm length: 241
Alignm identity: 175
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 22, 82

Conread position: 1-242
Cow position:
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 81

Conread position: 1-242
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 18, 82

Conread position: 1-243
Cow position:
Alignm length: 249
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 31

Conread position: 1-243
Cow position:
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 92

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 81

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 26

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 176

Conread position: 1-244
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 18, 75

Conread position: 1-244
Cow position:
Alignm length: 250
Alignm identity: 188
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 189, 58

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 191

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 184
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 22, 42

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 20

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 192
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 22, 42

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 20, 71

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 98

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 192
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 17, 83

Conread position: 1-244
Cow position:
Alignm length: 252
Alignm identity: 193
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 42, 85

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 23, 81

Conread position: 2-217
Cow position:
Alignm length: 219
Alignm identity: 164
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 24, 80

Conread position: 2-217
Cow position:
Alignm length: 221
Alignm identity: 168
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 21, 93

Conread position: 2-220
Cow position:
Alignm length: 221
Alignm identity: 160
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 21, 97

Conread position: 2-225
Cow position:
Alignm length: 228
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 165, 24

Conread position: 2-244
Cow position:
Alignm length: 248
Alignm identity: 188
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 21, 105

Conread position: 3-164
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 3-164
Cow position:
Alignm length: 163
Alignm identity: 132
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 18, 0

Conread position: 3-181
Cow position:
Alignm length: 180
Alignm identity: 146
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 163, 30

Conread position: 3-226
Cow position:
Alignm length: 227
Alignm identity: 171
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 15, 84

Conread position: 3-233
Cow position:
Alignm length: 236
Alignm identity: 176
Alignm E-value: 8e-38
Alignm gaps (pig, cow): 20, 92

Conread position: 3-242
Cow position:
Alignm length: 244
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 17, 93

Conread position: 3-244
Cow position:
Alignm length: 245
Alignm identity: 185
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 88, 20

Conread position: 6-211
Cow position:
Alignm length: 212
Alignm identity: 162
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 139, 69

Conread position: 6-222
Cow position:
Alignm length: 223
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 17, 78

Conread position: 6-242
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 18, 50

Conread position: 7-164
Cow position:
Alignm length: 159
Alignm identity: 132
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 11, 0

Conread position: 7-178
Cow position:
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 160, 58

Conread position: 7-232
Cow position:
Alignm length: 235
Alignm identity: 175
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 16, 93

Conread position: 8-220
Cow position:
Alignm length: 217
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 16, 52

Conread position: 9-242
Cow position:
Alignm length: 238
Alignm identity: 185
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 10, 19

Conread position: 11-215
Cow position:
Alignm length: 209
Alignm identity: 162
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 12, 36

Conread position: 11-225
Cow position:
Alignm length: 221
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 133, 83

Conread position: 13-244
Cow position:
Alignm length: 238
Alignm identity: 183
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 10, 82

Conread position: 13-244
Cow position:
Alignm length: 236
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 204

Conread position: 14-221
Cow position:
Alignm length: 209
Alignm identity: 165
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 153, 64

Conread position: 14-243
Cow position:
Alignm length: 234
Alignm identity: 158
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 214

Conread position: 14-244
Cow position:
Alignm length: 235
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 10, 224

Conread position: 17-146
Cow position:
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 17-220
Cow position:
Alignm length: 208
Alignm identity: 149
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 95, 58

Conread position: 17-244
Cow position:
Alignm length: 231
Alignm identity: 167
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 138, 107

Conread position: 17-244
Cow position:
Alignm length: 232
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 150, 51

Conread position: 18-216
Cow position:
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 172, 76

Conread position: 19-244
Cow position:
Alignm length: 231
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 168, 87

Conread position: 20-244
Cow position:
Alignm length: 228
Alignm identity: 166
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 14, 93

Conread position: 24-223
Cow position:
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 121, 55

Conread position: 27-244
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 55

Conread position: 30-217
Cow position:
Alignm length: 190
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 109, 62

Conread position: 37-220
Cow position:
Alignm length: 188
Alignm identity: 154
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 129, 50

Conread position: 42-244
Cow position:
Alignm length: 206
Alignm identity: 163
Alignm E-value: 0
Alignm gaps (pig, cow): 124, 0

Conread position: 43-242
Cow position:
Alignm length: 201
Alignm identity: 149
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 124, 139

Conread position: 49-244
Cow position:
Alignm length: 199
Alignm identity: 150
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 117, 30

Conread position: 57-222
Cow position:
Alignm length: 167
Alignm identity: 129
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 113, 41

Conread position: 59-241
Cow position:
Alignm length: 186
Alignm identity: 143
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 108, 120

Conread position: 60-222
Cow position:
Alignm length: 163
Alignm identity: 135
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 6, 0

Conread position: 60-244
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 92, 46

Conread position: 63-211
Cow position:
Alignm length: 154
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 0

Conread position: 65-244
Cow position:
Alignm length: 182
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 123, 101

Conread position: 66-244
Cow position:
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 101, 0

Conread position: 70-243
Cow position:
Alignm length: 178
Alignm identity: 141
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 97, 0

Conread position: 73-189
Cow position:
Alignm length: 118
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 94, 0

Conread position: 76-244
Cow position:
Alignm length: 174
Alignm identity: 128
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 90, 133

Conread position: 84-211
Cow position:
Alignm length: 134
Alignm identity: 106
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 28

Conread position: 85-220
Cow position:
Alignm length: 139
Alignm identity: 109
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 92-244
Cow position:
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 98, 14

Conread position: 94-244
Cow position:
Alignm length: 153
Alignm identity: 117
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 94-244
Cow position:
Alignm length: 153
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 111-244
Cow position:
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 78, 55

Conread position: 123-221
Cow position:
Alignm length: 102
Alignm identity: 85
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 0

Show alignments to all cow chromosomes.