Cow genome map

Conread name: rpigcf0_020330.y1

Conread position: 1-146
Cow position:
Alignm length: 146
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 1-151
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 22, 72

Conread position: 1-178
Cow position:
Alignm length: 179
Alignm identity: 143
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 166, 73

Conread position: 1-197
Cow position:
Alignm length: 201
Alignm identity: 153
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 23, 159

Conread position: 1-202
Cow position:
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 23, 92

Conread position: 1-210
Cow position:
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 87

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 164
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 17, 84

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 161
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 96

Conread position: 1-211
Cow position:
Alignm length: 213
Alignm identity: 165
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 23, 101

Conread position: 1-211
Cow position:
Alignm length: 215
Alignm identity: 168
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 18, 100

Conread position: 1-211
Cow position:
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-212
Cow position:
Alignm length: 216
Alignm identity: 179
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 0

Conread position: 1-215
Cow position:
Alignm length: 219
Alignm identity: 167
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 42, 126

Conread position: 1-217
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 20, 0

Conread position: 1-217
Cow position:
Alignm length: 220
Alignm identity: 170
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 22, 123

Conread position: 1-217
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 17, 98

Conread position: 1-218
Cow position:
Alignm length: 221
Alignm identity: 173
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 81

Conread position: 1-218
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 188, 64

Conread position: 1-219
Cow position:
Alignm length: 226
Alignm identity: 174
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 17, 82

Conread position: 1-219
Cow position:
Alignm length: 224
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-220
Cow position:
Alignm length: 226
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 1-220
Cow position:
Alignm length: 225
Alignm identity: 159
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 23, 100

Conread position: 1-221
Cow position:
Alignm length: 224
Alignm identity: 168
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 22, 97

Conread position: 1-221
Cow position:
Alignm length: 223
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 187, 21

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 171
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 19, 0

Conread position: 1-222
Cow position:
Alignm length: 225
Alignm identity: 166
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 144, 93

Conread position: 1-222
Cow position:
Alignm length: 227
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 170
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 22, 84

Conread position: 1-222
Cow position:
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 81

Conread position: 1-222
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 24, 33

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 22, 62

Conread position: 1-222
Cow position:
Alignm length: 226
Alignm identity: 172
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 17, 94

Conread position: 1-223
Cow position:
Alignm length: 228
Alignm identity: 173
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 144, 22

Conread position: 1-225
Cow position:
Alignm length: 227
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 31

Conread position: 1-232
Cow position:
Alignm length: 237
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 56

Conread position: 1-232
Cow position:
Alignm length: 238
Alignm identity: 173
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 25, 111

Conread position: 1-236
Cow position:
Alignm length: 243
Alignm identity: 175
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 17, 104

Conread position: 1-237
Cow position:
Alignm length: 238
Alignm identity: 180
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 169, 32

Conread position: 1-241
Cow position:
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 82

Conread position: 1-242
Cow position:
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 164, 25

Conread position: 1-243
Cow position:
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 128

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 98

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 0

Conread position: 1-244
Cow position:
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 166, 22

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 79

Conread position: 1-244
Cow position:
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 104

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 94

Conread position: 1-244
Cow position:
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 106

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 189
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 123, 30

Conread position: 1-244
Cow position:
Alignm length: 249
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 57

Conread position: 1-244
Cow position:
Alignm length: 257
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 81

Conread position: 1-244
Cow position:
Alignm length: 248
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 0

Conread position: 1-244
Cow position:
Alignm length: 251
Alignm identity: 194
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 22, 106

Conread position: 2-193
Cow position:
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 21, 50

Conread position: 2-202
Cow position:
Alignm length: 203
Alignm identity: 149
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 20, 101

Conread position: 2-222
Cow position:
Alignm length: 226
Alignm identity: 173
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 19, 81

Conread position: 2-244
Cow position:
Alignm length: 254
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 16, 31

Conread position: 2-244
Cow position:
Alignm length: 246
Alignm identity: 185
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 21, 96

Conread position: 3-220
Cow position:
Alignm length: 221
Alignm identity: 171
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 23, 94

Conread position: 3-222
Cow position:
Alignm length: 222
Alignm identity: 172
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 20, 31

Conread position: 3-222
Cow position:
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 68, 91

Conread position: 3-223
Cow position:
Alignm length: 222
Alignm identity: 154
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 18, 0

Conread position: 3-232
Cow position:
Alignm length: 236
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 0

Conread position: 3-242
Cow position:
Alignm length: 244
Alignm identity: 188
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 15, 90

Conread position: 3-243
Cow position:
Alignm length: 246
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 164, 0

Conread position: 3-243
Cow position:
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 46

Conread position: 3-244
Cow position:
Alignm length: 244
Alignm identity: 176
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 15, 111

Conread position: 4-170
Cow position:
Alignm length: 168
Alignm identity: 132
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 19, 0

Conread position: 6-225
Cow position:
Alignm length: 223
Alignm identity: 164
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 164, 90

Conread position: 6-229
Cow position:
Alignm length: 229
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 12, 187

Conread position: 6-232
Cow position:
Alignm length: 230
Alignm identity: 178
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 17, 91

Conread position: 7-244
Cow position:
Alignm length: 241
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 179

Conread position: 9-231
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 179, 73

Conread position: 9-244
Cow position:
Alignm length: 242
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 14

Conread position: 11-217
Cow position:
Alignm length: 210
Alignm identity: 163
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 159, 26

Conread position: 11-242
Cow position:
Alignm length: 235
Alignm identity: 184
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 12, 73

Conread position: 11-244
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 177, 99

Conread position: 14-244
Cow position:
Alignm length: 240
Alignm identity: 181
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 23, 136

Conread position: 17-199
Cow position:
Alignm length: 184
Alignm identity: 142
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 151, 79

Conread position: 17-224
Cow position:
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 65

Conread position: 17-230
Cow position:
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 41, 63

Conread position: 17-244
Cow position:
Alignm length: 234
Alignm identity: 181
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 10, 113

Conread position: 17-244
Cow position:
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 149, 85

Conread position: 17-244
Cow position:
Alignm length: 234
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 99

Conread position: 17-244
Cow position:
Alignm length: 233
Alignm identity: 175
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 150, 212

Conread position: 18-210
Cow position:
Alignm length: 193
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 76, 0

Conread position: 18-217
Cow position:
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 123, 76

Conread position: 18-244
Cow position:
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 0

Conread position: 19-244
Cow position:
Alignm length: 228
Alignm identity: 160
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 148, 52

Conread position: 23-198
Cow position:
Alignm length: 179
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 144, 0

Conread position: 23-219
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 164, 14

Conread position: 24-221
Cow position:
Alignm length: 201
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 121, 68

Conread position: 35-242
Cow position:
Alignm length: 211
Alignm identity: 167
Alignm E-value: 0
Alignm gaps (pig, cow): 136, 200

Conread position: 36-217
Cow position:
Alignm length: 185
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 23

Conread position: 42-195
Cow position:
Alignm length: 157
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 119, 129

Conread position: 42-220
Cow position:
Alignm length: 182
Alignm identity: 141
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 128, 60

Conread position: 42-244
Cow position:
Alignm length: 206
Alignm identity: 157
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 128, 56

Conread position: 43-218
Cow position:
Alignm length: 179
Alignm identity: 133
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 123, 39

Conread position: 46-244
Cow position:
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 158

Conread position: 47-222
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 39

Conread position: 50-196
Cow position:
Alignm length: 151
Alignm identity: 125
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 7, 47

Conread position: 53-244
Cow position:
Alignm length: 200
Alignm identity: 155
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 21, 17

Conread position: 59-214
Cow position:
Alignm length: 156
Alignm identity: 118
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 111, 0

Conread position: 59-244
Cow position:
Alignm length: 189
Alignm identity: 149
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 108, 56

Conread position: 62-242
Cow position:
Alignm length: 195
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 18

Conread position: 70-244
Cow position:
Alignm length: 180
Alignm identity: 134
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 7, 0

Conread position: 74-244
Cow position:
Alignm length: 172
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 116

Conread position: 77-244
Cow position:
Alignm length: 170
Alignm identity: 132
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 90, 149

Conread position: 82-222
Cow position:
Alignm length: 145
Alignm identity: 108
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 57, 29

Conread position: 84-218
Cow position:
Alignm length: 138
Alignm identity: 109
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 85-244
Cow position:
Alignm length: 162
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 105, 82

Conread position: 85-244
Cow position:
Alignm length: 163
Alignm identity: 124
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 85, 37

Conread position: 90-244
Cow position:
Alignm length: 160
Alignm identity: 132
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 77, 149

Conread position: 97-244
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 100-200
Cow position:
Alignm length: 105
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 100-244
Cow position:
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 112-244
Cow position:
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 55, 0

Conread position: 138-244
Cow position:
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 29, 0

Show alignments to all cow chromosomes.