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Cow genome map

           
Conread name:
           
rpigcf0_020369.y1
        

               
Conread position:
               
16-208
               

               
Cow position:
               
chr13:5175908-5175707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
22-200
               

               
Cow position:
               
chr13:6616413-6616603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
23-195
               

               
Cow position:
               
chr13:12045007-12045184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
23-205
               

               
Cow position:
               
chr13:3143572-3143381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr13:1231985-1231790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr13:12546569-12546767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr13:12977893-12977703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
114, 74
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr13:20605785-20605980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr13:30651509-30651315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
114, 168
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr13:34508210-34508012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr13:6189297-6189493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr13:15591800-15591994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
119, 29
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr13:52010252-52010447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
120, 190
               

               
Conread position:
               
23-209
               

               
Cow position:
               
chr13:15958951-15958757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
114, 43
               

               
Conread position:
               
23-209
               

               
Cow position:
               
chr13:33875996-33875798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
23-214
               

               
Cow position:
               
chr13:40652267-40652064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
24-206
               

               
Cow position:
               
chr13:35533155-35532967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
115, 26
               

               
Conread position:
               
24-208
               

               
Cow position:
               
chr13:21235356-21235550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
26-208
               

               
Cow position:
               
chr13:21039272-21039461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
29-196
               

               
Cow position:
               
chr13:20440273-20440450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 171
               

               
Conread position:
               
29-198
               

               
Cow position:
               
chr13:10928665-10928843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
109, 70
               

               
Conread position:
               
29-200
               

               
Cow position:
               
chr13:21155163-21155344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
112, 84
               

               
Conread position:
               
29-200
               

               
Cow position:
               
chr13:32949678-32949858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
108, 64
               

               
Conread position:
               
29-200
               

               
Cow position:
               
chr13:52284237-52284054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-202
               

               
Cow position:
               
chr13:37945892-37946072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
97, 155
               

               
Conread position:
               
29-203
               

               
Cow position:
               
chr13:20537911-20537725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-204
               

               
Cow position:
               
chr13:34263054-34263232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
84, 35
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr13:6606692-6606881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:1042628-1042818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:6086573-6086761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:12407956-12408144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:19178601-19178415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
115, 75
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:26073257-26073074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
110, 68
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:31808840-31808651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:38283656-38283845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:42229647-42229467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr13:43384308-43384495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr13:11774415-11774601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
101, 68
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr13:11820905-11820717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
112, 98
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr13:47007411-47007598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 70
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr13:51941057-51940869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr13:152271-152091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
48, 164
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr13:19882711-19882901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
113, 68
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr13:22085432-22085614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
113, 68
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr13:27027449-27027635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
94, 52
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr13:40943571-40943381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr13:50690064-50690259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
110, 177
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr13:61170396-61170582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
29-210
               

               
Cow position:
               
chr13:20666060-20666251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-212
               

               
Cow position:
               
chr13:36771094-36771293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
100, 174
               

               
Conread position:
               
29-216
               

               
Cow position:
               
chr13:43138901-43139096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-216
               

               
Cow position:
               
chr13:47215925-47216127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
29-217
               

               
Cow position:
               
chr13:17820933-17821131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
30-194
               

               
Cow position:
               
chr13:25248817-25248992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
30-207
               

               
Cow position:
               
chr13:51901939-51901750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
30-208
               

               
Cow position:
               
chr13:26098469-26098282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
31-204
               

               
Cow position:
               
chr13:15162343-15162523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
109, 174
               

               
Conread position:
               
31-207
               

               
Cow position:
               
chr13:21135406-21135593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr13:25531464-25531651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr13:32017197-32017389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr13:46182099-46181926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
106, 36
               

               
Conread position:
               
32-206
               

               
Cow position:
               
chr13:15172084-15172268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 81
               

               
Conread position:
               
32-206
               

               
Cow position:
               
chr13:21524750-21524568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
32-208
               

               
Cow position:
               
chr13:54286445-54286627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
32-210
               

               
Cow position:
               
chr13:16833764-16833941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
12, 144
               

               
Conread position:
               
32-217
               

               
Cow position:
               
chr13:23269888-23270085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
33-208
               

               
Cow position:
               
chr13:57493860-57494046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
33-210
               

               
Cow position:
               
chr13:37980327-37980515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
34-213
               

               
Cow position:
               
chr13:37981429-37981618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
64, 175
               

               
Conread position:
               
38-208
               

               
Cow position:
               
chr13:27524943-27525128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
39-217
               

               
Cow position:
               
chr13:17291816-17292005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
40-205
               

               
Cow position:
               
chr13:34556032-34556193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
100, 57
               

               
Conread position:
               
40-214
               

               
Cow position:
               
chr13:8202568-8202751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
47-205
               

               
Cow position:
               
chr13:20813973-20814140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
47-205
               

               
Cow position:
               
chr13:20816620-20816453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 50
               

               
Conread position:
               
51-212
               

               
Cow position:
               
chr13:14927543-14927372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
53-208
               

               
Cow position:
               
chr13:15740367-15740202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
89, 44
               

               
Conread position:
               
59-208
               

               
Cow position:
               
chr13:45353340-45353183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
90-208
               

               
Cow position:
               
chr13:14576933-14576807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
383-614
               

               
Cow position:
               
chr13:52922259-52922031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
37, 142
               

               
Conread position:
               
386-618
               

               
Cow position:
               
chr13:17568936-17569172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
60, 137
               

               
Conread position:
               
386-618
               

               
Cow position:
               
chr13:48861931-48862166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
37, 144
               

               
Conread position:
               
387-581
               

               
Cow position:
               
chr13:26366043-26365853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 99
               

               
Conread position:
               
389-546
               

               
Cow position:
               
chr13:23960652-23960810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
389-582
               

               
Cow position:
               
chr13:44323059-44322871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
389-612
               

               
Cow position:
               
chr13:18172497-18172271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
390-525
               

               
Cow position:
               
chr13:21235529-21235662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
390-574
               

               
Cow position:
               
chr13:20863856-20864038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
30, 63
               

               
Conread position:
               
390-578
               

               
Cow position:
               
chr13:52199250-52199060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 143
               

               
Conread position:
               
390-618
               

               
Cow position:
               
chr13:9593667-9593434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
131, 145
               

               
Conread position:
               
390-618
               

               
Cow position:
               
chr13:23667415-23667182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
23, 62
               

               
Conread position:
               
390-618
               

               
Cow position:
               
chr13:53574130-53573898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
390-620
               

               
Cow position:
               
chr13:15288769-15288994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 58
               

               
Conread position:
               
394-582
               

               
Cow position:
               
chr13:47964043-47964221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
394-616
               

               
Cow position:
               
chr13:18852232-18852011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
396-526
               

               
Cow position:
               
chr13:20820684-20820811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
396-591
               

               
Cow position:
               
chr13:20683969-20684161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
396-592
               

               
Cow position:
               
chr13:30693858-30693674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
396-599
               

               
Cow position:
               
chr13:626713-626509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
69, 84
               

               
Conread position:
               
396-618
               

               
Cow position:
               
chr13:10928842-10929059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
396-618
               

               
Cow position:
               
chr13:31814023-31813805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
130, 24
               

               
Conread position:
               
397-528
               

               
Cow position:
               
chr13:21210009-21209881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
397-593
               

               
Cow position:
               
chr13:26698346-26698541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
397-618
               

               
Cow position:
               
chr13:18696993-18696769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
191, 23
               

               
Conread position:
               
398-592
               

               
Cow position:
               
chr13:10098841-10099028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
399-540
               

               
Cow position:
               
chr13:2774276-2774137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-587
               

               
Cow position:
               
chr13:12670299-12670486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
399-590
               

               
Cow position:
               
chr13:27525116-27525297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-592
               

               
Cow position:
               
chr13:20880777-20880970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
118, 22
               

               
Conread position:
               
399-592
               

               
Cow position:
               
chr13:54702336-54702146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-603
               

               
Cow position:
               
chr13:28652948-28652747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
95, 21
               

               
Conread position:
               
399-611
               

               
Cow position:
               
chr13:34281825-34281614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
194, 21
               

               
Conread position:
               
399-612
               

               
Cow position:
               
chr13:15528883-15529099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
181, 21
               

               
Conread position:
               
399-613
               

               
Cow position:
               
chr13:43480206-43479994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
193, 21
               

               
Conread position:
               
399-613
               

               
Cow position:
               
chr13:54583026-54582806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
399-614
               

               
Cow position:
               
chr13:24586190-24585979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
399-614
               

               
Cow position:
               
chr13:40943393-40943176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
132, 21
               

               
Conread position:
               
399-617
               

               
Cow position:
               
chr13:14016420-14016636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
49, 21
               

               
Conread position:
               
399-617
               

               
Cow position:
               
chr13:17745388-17745173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
194, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:11460770-11460562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
185, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:12618964-12619186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
125, 139
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:13261153-13260932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
134, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:15903165-15902953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
194, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:17021580-17021797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
186, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:17439621-17439839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
194, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:19022424-19022200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
136, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:19882889-19883108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
177, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:20473542-20473753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
193, 18
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:20706057-20706276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
193, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:37484125-37484350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:41806924-41806701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
134, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:45023063-45023280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
137, 21
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:53566744-53566530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr13:55674060-55674279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
194, 21
               

               
Conread position:
               
399-620
               

               
Cow position:
               
chr13:38329775-38329543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
400-592
               

               
Cow position:
               
chr13:37521232-37521416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
400-617
               

               
Cow position:
               
chr13:48037770-48037553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
124, 153
               

               
Conread position:
               
400-618
               

               
Cow position:
               
chr13:23856361-23856140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
192, 128
               

               
Conread position:
               
400-618
               

               
Cow position:
               
chr13:54388873-54389092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
189, 21
               

               
Conread position:
               
401-592
               

               
Cow position:
               
chr13:49503383-49503572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
401-609
               

               
Cow position:
               
chr13:12989991-12989788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
65, 20
               

               
Conread position:
               
401-620
               

               
Cow position:
               
chr13:15884869-15885095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 141
               

               
Conread position:
               
403-584
               

               
Cow position:
               
chr13:37818604-37818786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
403-591
               

               
Cow position:
               
chr13:57494038-57494229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
34, 17
               

               
Conread position:
               
403-618
               

               
Cow position:
               
chr13:20679495-20679268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
17, 134
               

               
Conread position:
               
403-619
               

               
Cow position:
               
chr13:34263224-34263442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
176, 17
               

               
Conread position:
               
405-518
               

               
Cow position:
               
chr13:3701580-3701469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
405-531
               

               
Cow position:
               
chr13:18835335-18835211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
405-591
               

               
Cow position:
               
chr13:8374629-8374812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
405-591
               

               
Cow position:
               
chr13:35659898-35659720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
15, 124
               

               
Conread position:
               
405-592
               

               
Cow position:
               
chr13:61976818-61977000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
19, 126
               

               
Conread position:
               
405-613
               

               
Cow position:
               
chr13:15166962-15166752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 15
               

               
Conread position:
               
405-614
               

               
Cow position:
               
chr13:24369723-24369514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
188, 15
               

               
Conread position:
               
405-614
               

               
Cow position:
               
chr13:51528302-51528510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 66
               

               
Conread position:
               
405-617
               

               
Cow position:
               
chr13:17291984-17292201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
19, 135
               

               
Conread position:
               
405-618
               

               
Cow position:
               
chr13:6060867-6061079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
178, 15
               

               
Conread position:
               
405-618
               

               
Cow position:
               
chr13:12202514-12202291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
405-618
               

               
Cow position:
               
chr13:36771277-36771493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
47, 18
               

               
Conread position:
               
406-618
               

               
Cow position:
               
chr13:17970885-17971101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
120, 98
               

               
Conread position:
               
406-618
               

               
Cow position:
               
chr13:25817665-25817456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
182, 67
               

               
Conread position:
               
407-587
               

               
Cow position:
               
chr13:24376633-24376458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
20, 71
               

               
Conread position:
               
408-541
               

               
Cow position:
               
chr13:51940877-51940743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
410-594
               

               
Cow position:
               
chr13:11820731-11820560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
411-581
               

               
Cow position:
               
chr13:55295484-55295652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
9, 118
               

               
Conread position:
               
411-590
               

               
Cow position:
               
chr13:971753-971936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-39
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
411-618
               

               
Cow position:
               
chr13:5758202-5758413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
16, 141
               

               
Conread position:
               
411-618
               

               
Cow position:
               
chr13:13176793-13176579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
18, 143
               

               
Conread position:
               
411-618
               

               
Cow position:
               
chr13:22085608-22085817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
178, 13
               

               
Conread position:
               
411-618
               

               
Cow position:
               
chr13:56155020-56155222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
10, 79
               

               
Conread position:
               
412-591
               

               
Cow position:
               
chr13:18058107-18058289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
17, 112
               

               
Conread position:
               
419-537
               

               
Cow position:
               
chr13:17815898-17815779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
419-539
               

               
Cow position:
               
chr13:15869251-15869131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
114, 32
               

               
Conread position:
               
419-545
               

               
Cow position:
               
chr13:5079094-5079219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
419-579
               

               
Cow position:
               
chr13:6389510-6389354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 110
               

               
Conread position:
               
419-591
               

               
Cow position:
               
chr13:17966079-17966247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
419-592
               

               
Cow position:
               
chr13:11381592-11381763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
419-596
               

               
Cow position:
               
chr13:15110450-15110270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
419-600
               

               
Cow position:
               
chr13:43184743-43184923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
419-608
               

               
Cow position:
               
chr13:17800202-17800011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
114, 52
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr13:17114249-17114450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
120, 19
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr13:17821138-17821341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
108, 124
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr13:20666259-20666457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
107, 14
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr13:20784718-20784519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
125, 54
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr13:23479156-23478959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
170, 14
               

               
Conread position:
               
420-618
               

               
Cow position:
               
chr13:56686561-56686363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
129, 56
               

               
Conread position:
               
421-599
               

               
Cow position:
               
chr13:12682417-12682593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
111, 73
               

               
Conread position:
               
421-600
               

               
Cow position:
               
chr13:25531660-25531839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
119, 149
               

               
Conread position:
               
424-590
               

               
Cow position:
               
chr13:60375363-60375528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
426-618
               

               
Cow position:
               
chr13:20288453-20288267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
166, 102
               

               
Conread position:
               
426-618
               

               
Cow position:
               
chr13:55316066-55316262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
167, 102
               

               
Conread position:
               
428-616
               

               
Cow position:
               
chr13:34555711-34555897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
151, 65
               

               
Conread position:
               
430-618
               

               
Cow position:
               
chr13:15194613-15194806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
124, 92
               

               
Conread position:
               
431-592
               

               
Cow position:
               
chr13:21135782-21135941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
435-592
               

               
Cow position:
               
chr13:32826342-32826498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
87, 97
               

               
Conread position:
               
438-614
               

               
Cow position:
               
chr13:19279202-19279028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
151, 12
               

               
Conread position:
               
445-618
               

               
Cow position:
               
chr13:7265021-7265191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
139, 42
               

               
Conread position:
               
446-591
               

               
Cow position:
               
chr13:46329501-46329645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               
Show alignments to all cow chromosomes.