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Cow genome map

           
Conread name:
           
rpigcf0_020369.y1
        

               
Conread position:
               
6-206
               

               
Cow position:
               
chr21:31278480-31278689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
136, 92
               

               
Conread position:
               
9-190
               

               
Cow position:
               
chr21:14760286-14760474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
133, 50
               

               
Conread position:
               
23-204
               

               
Cow position:
               
chr21:42414384-42414195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
119, 74
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:4279349-4279542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
114, 30
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:4905252-4905063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:5344376-5344564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:7717073-7716881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
116, 75
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:8981409-8981220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:12366102-12366297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:18713001-18713193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
119, 91
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:19702239-19702432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
119, 182
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:30626468-30626276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
23-206
               

               
Cow position:
               
chr21:39664656-39664479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr21:4189547-4189746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr21:8985264-8985461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr21:28881864-28882056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr21:32237015-32237209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
119, 77
               

               
Conread position:
               
23-208
               

               
Cow position:
               
chr21:43631477-43631293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 108
               

               
Conread position:
               
23-216
               

               
Cow position:
               
chr21:21480464-21480259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
23-222
               

               
Cow position:
               
chr21:4998770-4998561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
27-205
               

               
Cow position:
               
chr21:11740412-11740222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
110, 24
               

               
Conread position:
               
28-206
               

               
Cow position:
               
chr21:43357541-43357355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
76, 183
               

               
Conread position:
               
29-190
               

               
Cow position:
               
chr21:27406483-27406317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
115, 76
               

               
Conread position:
               
29-204
               

               
Cow position:
               
chr21:44038-44215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
36, 61
               

               
Conread position:
               
29-204
               

               
Cow position:
               
chr21:1510815-1510983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
85, 33
               

               
Conread position:
               
29-204
               

               
Cow position:
               
chr21:20262613-20262426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-204
               

               
Cow position:
               
chr21:31576235-31576424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
29-205
               

               
Cow position:
               
chr21:7672854-7673041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:725169-724982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
108, 84
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:5455265-5455077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:7582184-7582000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:9415964-9416152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:13048475-13048287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
108, 89
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:16909776-16909968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:22719059-22718871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 70
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:22855940-22856124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:25158614-25158800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 86
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:28443640-28443464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 101
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:28512262-28512442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
60, 77
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:29424110-29424296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:32297781-32297601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-206
               

               
Cow position:
               
chr21:47760498-47760685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-207
               

               
Cow position:
               
chr21:35897900-35897715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 65
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:2679280-2679468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
94, 75
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:12616863-12617049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
108, 68
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:17282424-17282615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:20925784-20925595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 31
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:23821889-23822079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:26648283-26648095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 139
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:27230071-27229883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
108, 73
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:29069607-29069417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
106, 80
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:34738319-34738511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:37479680-37479872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
96, 68
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:39401321-39401506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:42023856-42024036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
29-208
               

               
Cow position:
               
chr21:42540499-42540305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
29-209
               

               
Cow position:
               
chr21:42190437-42190255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
83, 25
               

               
Conread position:
               
29-216
               

               
Cow position:
               
chr21:612046-611849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
113, 84
               

               
Conread position:
               
29-216
               

               
Cow position:
               
chr21:37297591-37297403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 55
               

               
Conread position:
               
29-217
               

               
Cow position:
               
chr21:20045046-20044853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
113, 63
               

               
Conread position:
               
30-201
               

               
Cow position:
               
chr21:46912266-46912446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
30-208
               

               
Cow position:
               
chr21:19363728-19363548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
165, 87
               

               
Conread position:
               
30-208
               

               
Cow position:
               
chr21:38691914-38692099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
92, 45
               

               
Conread position:
               
30-221
               

               
Cow position:
               
chr21:643059-643258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
31-204
               

               
Cow position:
               
chr21:3813744-3813575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
31-206
               

               
Cow position:
               
chr21:28477348-28477531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
31-206
               

               
Cow position:
               
chr21:47745950-47745765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr21:14125786-14125955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr21:17643240-17643055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
92, 80
               

               
Conread position:
               
31-208
               

               
Cow position:
               
chr21:33209922-33210114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
111, 64
               

               
Conread position:
               
32-208
               

               
Cow position:
               
chr21:393745-393937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
32-208
               

               
Cow position:
               
chr21:40058529-40058717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
32-216
               

               
Cow position:
               
chr21:28429174-28429369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
110, 58
               

               
Conread position:
               
33-208
               

               
Cow position:
               
chr21:32535703-32535888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
104, 49
               

               
Conread position:
               
33-208
               

               
Cow position:
               
chr21:41155587-41155775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
35-200
               

               
Cow position:
               
chr21:16188068-16187902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
102, 38
               

               
Conread position:
               
35-208
               

               
Cow position:
               
chr21:48108127-48107951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 96
               

               
Conread position:
               
46-208
               

               
Cow position:
               
chr21:3585618-3585448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
96, 79
               

               
Conread position:
               
50-208
               

               
Cow position:
               
chr21:44826133-44825973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
75, 31
               

               
Conread position:
               
82-216
               

               
Cow position:
               
chr21:11877158-11877303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
358-536
               

               
Cow position:
               
chr21:22465058-22465235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
139, 17
               

               
Conread position:
               
385-618
               

               
Cow position:
               
chr21:12462085-12461847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 36
               

               
Conread position:
               
388-618
               

               
Cow position:
               
chr21:4280786-4280554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 96
               

               
Conread position:
               
388-618
               

               
Cow position:
               
chr21:32559472-32559245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 99
               

               
Conread position:
               
389-538
               

               
Cow position:
               
chr21:81967-82117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
389-542
               

               
Cow position:
               
chr21:7825288-7825135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
90, 85
               

               
Conread position:
               
389-590
               

               
Cow position:
               
chr21:30250299-30250114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
389-618
               

               
Cow position:
               
chr21:47465234-47464998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
35, 59
               

               
Conread position:
               
390-534
               

               
Cow position:
               
chr21:14515742-14515885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
390-581
               

               
Cow position:
               
chr21:9990405-9990588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
30, 84
               

               
Conread position:
               
390-590
               

               
Cow position:
               
chr21:29978866-29978673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
390-592
               

               
Cow position:
               
chr21:13488412-13488616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
146, 132
               

               
Conread position:
               
390-600
               

               
Cow position:
               
chr21:15976522-15976731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
55, 88
               

               
Conread position:
               
390-612
               

               
Cow position:
               
chr21:33982916-33982696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 61
               

               
Conread position:
               
390-618
               

               
Cow position:
               
chr21:17875303-17875073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
30, 146
               

               
Conread position:
               
390-618
               

               
Cow position:
               
chr21:22860889-22861122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
390-618
               

               
Cow position:
               
chr21:30222234-30222465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
202, 91
               

               
Conread position:
               
390-618
               

               
Cow position:
               
chr21:35354422-35354651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
30, 172
               

               
Conread position:
               
394-618
               

               
Cow position:
               
chr21:29214256-29214040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
198, 26
               

               
Conread position:
               
395-591
               

               
Cow position:
               
chr21:20262437-20262247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
137, 25
               

               
Conread position:
               
396-614
               

               
Cow position:
               
chr21:39401491-39401707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
181, 24
               

               
Conread position:
               
396-618
               

               
Cow position:
               
chr21:30592407-30592189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
194, 24
               

               
Conread position:
               
396-618
               

               
Cow position:
               
chr21:34391078-34390855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
156, 24
               

               
Conread position:
               
397-553
               

               
Cow position:
               
chr21:42348776-42348623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
397-590
               

               
Cow position:
               
chr21:29002260-29002068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
129, 23
               

               
Conread position:
               
398-534
               

               
Cow position:
               
chr21:45375522-45375655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
399-525
               

               
Cow position:
               
chr21:41957276-41957151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-529
               

               
Cow position:
               
chr21:33210102-33210231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-534
               

               
Cow position:
               
chr21:27810308-27810442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-537
               

               
Cow position:
               
chr21:32297607-32297471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
399-577
               

               
Cow position:
               
chr21:31691382-31691559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 21
               

               
Conread position:
               
399-592
               

               
Cow position:
               
chr21:5392639-5392447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
107, 21
               

               
Conread position:
               
399-592
               

               
Cow position:
               
chr21:10601474-10601286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
122, 21
               

               
Conread position:
               
399-592
               

               
Cow position:
               
chr21:18041948-18041758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-592
               

               
Cow position:
               
chr21:36297390-36297582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
139, 21
               

               
Conread position:
               
399-595
               

               
Cow position:
               
chr21:28443474-28443280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
129, 21
               

               
Conread position:
               
399-614
               

               
Cow position:
               
chr21:641486-641703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
399-617
               

               
Cow position:
               
chr21:30990370-30990168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
399-618
               

               
Cow position:
               
chr21:12723060-12723271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
162, 22
               

               
Conread position:
               
400-584
               

               
Cow position:
               
chr21:2679457-2679638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
400-590
               

               
Cow position:
               
chr21:8206673-8206859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
122, 20
               

               
Conread position:
               
400-592
               

               
Cow position:
               
chr21:44825985-44825800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
400-618
               

               
Cow position:
               
chr21:24858215-24858435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
184, 93
               

               
Conread position:
               
401-587
               

               
Cow position:
               
chr21:4795129-4795310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
401-592
               

               
Cow position:
               
chr21:18845115-18844923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 122
               

               
Conread position:
               
401-592
               

               
Cow position:
               
chr21:25764538-25764725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
19, 82
               

               
Conread position:
               
401-618
               

               
Cow position:
               
chr21:395772-395987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
198, 19
               

               
Conread position:
               
402-614
               

               
Cow position:
               
chr21:28626142-28626353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
187, 126
               

               
Conread position:
               
402-618
               

               
Cow position:
               
chr21:30835265-30835483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 18
               

               
Conread position:
               
403-595
               

               
Cow position:
               
chr21:12801843-12801657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
119, 17
               

               
Conread position:
               
403-603
               

               
Cow position:
               
chr21:16612529-16612725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
405-531
               

               
Cow position:
               
chr21:27624615-27624738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
405-551
               

               
Cow position:
               
chr21:12617043-12617187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
74, 16
               

               
Conread position:
               
405-578
               

               
Cow position:
               
chr21:35569473-35569309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
405-592
               

               
Cow position:
               
chr21:29069423-29069238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
405-594
               

               
Cow position:
               
chr21:12960993-12960808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
138, 16
               

               
Conread position:
               
405-599
               

               
Cow position:
               
chr21:957578-957769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
48, 15
               

               
Conread position:
               
405-599
               

               
Cow position:
               
chr21:19363560-19363362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
18, 126
               

               
Conread position:
               
405-613
               

               
Cow position:
               
chr21:23822073-23822270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
405-614
               

               
Cow position:
               
chr21:20192802-20193010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
188, 123
               

               
Conread position:
               
405-618
               

               
Cow position:
               
chr21:11645065-11644846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
119, 165
               

               
Conread position:
               
405-618
               

               
Cow position:
               
chr21:17183826-17184037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
405-618
               

               
Cow position:
               
chr21:27229889-27229674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
22, 15
               

               
Conread position:
               
405-618
               

               
Cow position:
               
chr21:28190932-28191152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 84
               

               
Conread position:
               
405-618
               

               
Cow position:
               
chr21:34653983-34654193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
174, 15
               

               
Conread position:
               
406-545
               

               
Cow position:
               
chr21:5636812-5636672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
113, 130
               

               
Conread position:
               
406-591
               

               
Cow position:
               
chr21:23192613-23192424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
18, 142
               

               
Conread position:
               
408-592
               

               
Cow position:
               
chr21:45262904-45262721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
69, 91
               

               
Conread position:
               
409-618
               

               
Cow position:
               
chr21:29484887-29485098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 120
               

               
Conread position:
               
409-618
               

               
Cow position:
               
chr21:38121011-38121221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
183, 13
               

               
Conread position:
               
411-523
               

               
Cow position:
               
chr21:32237203-32237318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
411-557
               

               
Cow position:
               
chr21:37361566-37361420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 142
               

               
Conread position:
               
411-590
               

               
Cow position:
               
chr21:28882044-28882225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 28
               

               
Conread position:
               
411-611
               

               
Cow position:
               
chr21:3236433-3236634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
15, 44
               

               
Conread position:
               
411-618
               

               
Cow position:
               
chr21:643239-643444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
175, 53
               

               
Conread position:
               
411-618
               

               
Cow position:
               
chr21:10000985-10001195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
38, 118
               

               
Conread position:
               
411-618
               

               
Cow position:
               
chr21:44515176-44515384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
413-550
               

               
Cow position:
               
chr21:42024032-42024169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
414-592
               

               
Cow position:
               
chr21:16187893-16187718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
415-614
               

               
Cow position:
               
chr21:33360122-33359925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 138
               

               
Conread position:
               
419-534
               

               
Cow position:
               
chr21:48251107-48250994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
419-592
               

               
Cow position:
               
chr21:45906702-45906534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
419-592
               

               
Cow position:
               
chr21:46264091-46264259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
419-599
               

               
Cow position:
               
chr21:18790641-18790465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
26, 115
               

               
Conread position:
               
419-617
               

               
Cow position:
               
chr21:23150102-23149902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
163, 55
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr21:13365257-13365462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr21:17856466-17856664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
173, 31
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr21:20260402-20260199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
133, 109
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr21:31090501-31090316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 52
               

               
Conread position:
               
419-618
               

               
Cow position:
               
chr21:42135701-42135496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
420-531
               

               
Cow position:
               
chr21:21216221-21216112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
420-608
               

               
Cow position:
               
chr21:36795520-36795713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
104, 125
               

               
Conread position:
               
420-617
               

               
Cow position:
               
chr21:11740196-11740000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
163, 43
               

               
Conread position:
               
421-592
               

               
Cow position:
               
chr21:18828385-18828213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
109, 38
               

               
Conread position:
               
421-614
               

               
Cow position:
               
chr21:10561663-10561467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
101, 113
               

               
Conread position:
               
421-617
               

               
Cow position:
               
chr21:724965-724766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
172, 107
               

               
Conread position:
               
422-614
               

               
Cow position:
               
chr21:37479881-37480070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
428-588
               

               
Cow position:
               
chr21:27079913-27079751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 67
               

               
Conread position:
               
428-612
               

               
Cow position:
               
chr21:8349256-8349442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
106, 100
               

               
Conread position:
               
431-618
               

               
Cow position:
               
chr21:44214055-44214246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
101, 109
               

               
Conread position:
               
441-618
               

               
Cow position:
               
chr21:297694-297874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
145, 40
               

               
Conread position:
               
442-584
               

               
Cow position:
               
chr21:12339581-12339722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 32
               

               
Conread position:
               
443-618
               

               
Cow position:
               
chr21:22014130-22014310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 68
               

               
Conread position:
               
446-602
               

               
Cow position:
               
chr21:41598064-41598219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
78, 102
               
Show alignments to all cow chromosomes.