Cow genome map

Conread name: rpigcf0_020369.y1

Conread position: 23-204
Cow position: chr25:11666316-11666500 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 70

Conread position: 23-205
Cow position: chr25:20060379-20060188 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 121, 74

Conread position: 23-206
Cow position: chr25:13325251-13325443 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 114, 94

Conread position: 23-206
Cow position: chr25:16922143-16921950 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 117, 103

Conread position: 23-206
Cow position: chr25:20403070-20402872 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 0

Conread position: 23-208
Cow position: chr25:25827110-25827312 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 83, 0

Conread position: 24-196
Cow position: chr25:31064821-31064995 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 73

Conread position: 24-202
Cow position: chr25:16064548-16064736 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 32, 60

Conread position: 27-216
Cow position: chr25:40388803-40388604 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 81, 0

Conread position: 28-200
Cow position: chr25:20069378-20069558 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 29-194
Cow position: chr25:11054585-11054752 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 107, 45

Conread position: 29-195
Cow position: chr25:36871514-36871692 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 29-200
Cow position: chr25:6470561-6470382 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 97, 0

Conread position: 29-204
Cow position: chr25:20020314-20020145 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 29-204
Cow position: chr25:37254605-37254773 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 29-206
Cow position: chr25:3145501-3145684 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 116, 0

Conread position: 29-206
Cow position: chr25:4548067-4547876 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 81

Conread position: 29-206
Cow position: chr25:5847140-5846963 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 123
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 78, 87

Conread position: 29-206
Cow position: chr25:11051038-11051218 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 149
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 113, 152

Conread position: 29-206
Cow position: chr25:11956482-11956669 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 29-206
Cow position: chr25:12174832-12174661 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 29-208
Cow position: chr25:2136019-2136197 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 143
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 103, 36

Conread position: 29-208
Cow position: chr25:5792147-5791961 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 76, 30

Conread position: 29-208
Cow position: chr25:8120432-8120626 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 29-208
Cow position: chr25:10137761-10137944 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 6, 69

Conread position: 29-208
Cow position: chr25:10643653-10643460 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 113, 61

Conread position: 29-208
Cow position: chr25:12239481-12239302 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 24

Conread position: 29-208
Cow position: chr25:17658270-17658459 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 152
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 112, 147

Conread position: 29-208
Cow position: chr25:22314856-22315050 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 109, 0

Conread position: 29-208
Cow position: chr25:22730305-22730484 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 113, 39

Conread position: 29-208
Cow position: chr25:26087171-26087365 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 113, 36

Conread position: 29-208
Cow position: chr25:26238524-26238717 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 29-208
Cow position: chr25:27868466-27868650 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 113, 39

Conread position: 29-208
Cow position: chr25:37469433-37469623 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 29-213
Cow position: chr25:10367031-10366837 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 29-214
Cow position: chr25:41387854-41387665 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 110, 66

Conread position: 29-216
Cow position: chr25:21209291-21209090 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 107, 73

Conread position: 30-205
Cow position: chr25:1735654-1735473 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 83

Conread position: 30-208
Cow position: chr25:7445810-7445998 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 112, 12

Conread position: 30-208
Cow position: chr25:14791412-14791600 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 30-208
Cow position: chr25:33256026-33256214 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 54

Conread position: 30-209
Cow position: chr25:16866894-16867078 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 112, 26

Conread position: 31-208
Cow position: chr25:9396112-9396296 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 110, 0

Conread position: 32-208
Cow position: chr25:12204127-12204316 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 20, 0

Conread position: 32-208
Cow position: chr25:21245948-21245761 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 106, 0

Conread position: 70-206
Cow position: chr25:25581510-25581643 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 11

Conread position: 99-208
Cow position: chr25:19366684-19366572 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 96
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 43, 78

Conread position: 370-618
Cow position: chr25:21893146-21893392 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 180
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 101, 17

Conread position: 387-578
Cow position: chr25:13443588-13443402 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 134
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 389-595
Cow position: chr25:20211260-20211054 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 34, 70

Conread position: 390-618
Cow position: chr25:5837139-5836903 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 39, 31

Conread position: 390-618
Cow position: chr25:16319305-16319086 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 164
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 202, 30

Conread position: 396-535
Cow position: chr25:1838066-1838207 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 396-549
Cow position: chr25:2596140-2596294 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 396-592
Cow position: chr25:19129684-19129878 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 108, 24

Conread position: 397-591
Cow position: chr25:6683235-6683040 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 29, 92

Conread position: 398-538
Cow position: chr25:16001693-16001552 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 398-591
Cow position: chr25:7750288-7750474 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 398-618
Cow position: chr25:6961320-6961099 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 123, 22

Conread position: 399-587
Cow position: chr25:7800974-7801159 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 22, 0

Conread position: 399-613
Cow position: chr25:20023555-20023337 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 147, 21

Conread position: 399-614
Cow position: chr25:4681071-4681280 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 194, 21

Conread position: 399-618
Cow position: chr25:3145678-3145898 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 18, 33

Conread position: 399-618
Cow position: chr25:11661982-11661764 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 180, 21

Conread position: 399-618
Cow position: chr25:19679180-19679409 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 125, 21

Conread position: 400-587
Cow position: chr25:35347743-35347922 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 160, 20

Conread position: 401-578
Cow position: chr25:8120614-8120792 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 19, 113

Conread position: 402-587
Cow position: chr25:12319511-12319325 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 145, 132

Conread position: 403-618
Cow position: chr25:7216667-7216878 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 83

Conread position: 403-618
Cow position: chr25:21191330-21191543 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 149, 16

Conread position: 404-592
Cow position: chr25:36036941-36036756 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 16, 0

Conread position: 404-618
Cow position: chr25:24572910-24573119 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 131, 16

Conread position: 405-525
Cow position: chr25:24669597-24669477 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 405-566
Cow position: chr25:12899598-12899757 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 154, 15

Conread position: 405-614
Cow position: chr25:33550349-33550559 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 158
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 126, 15

Conread position: 405-618
Cow position: chr25:12778688-12778487 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 189, 15

Conread position: 405-618
Cow position: chr25:25051546-25051324 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 143

Conread position: 405-618
Cow position: chr25:26679068-26679280 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 188, 15

Conread position: 406-531
Cow position: chr25:41151120-41150996 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 407-581
Cow position: chr25:11054746-11054916 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 407-592
Cow position: chr25:2414659-2414838 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 66

Conread position: 411-587
Cow position: chr25:36033280-36033456 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 12, 126

Conread position: 411-592
Cow position: chr25:11436962-11436784 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 61

Conread position: 411-618
Cow position: chr25:16570461-16570656 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 155
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 178, 16

Conread position: 412-618
Cow position: chr25:28188104-28187891 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 12, 120

Conread position: 419-537
Cow position: chr25:18905738-18905859 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 0

Conread position: 419-537
Cow position: chr25:22332615-22332737 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 419-587
Cow position: chr25:21668099-21668267 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 126, 109

Conread position: 419-602
Cow position: chr25:20785731-20785555 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 22, 0

Conread position: 419-618
Cow position: chr25:4521981-4521787 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 173, 51

Conread position: 419-618
Cow position: chr25:12609198-12609394 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 173, 75

Conread position: 419-620
Cow position: chr25:26089961-26089757 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 140, 74

Conread position: 420-618
Cow position: chr25:17566439-17566641 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 32, 105

Conread position: 420-618
Cow position: chr25:36081731-36081929 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 115

Conread position: 424-592
Cow position: chr25:12510153-12509988 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 17, 58

Conread position: 427-618
Cow position: chr25:24051824-24052020 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 100, 71

Conread position: 431-614
Cow position: chr25:19364193-19364009 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 31, 13

Conread position: 433-536
Cow position: chr25:7449675-7449777 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 433-618
Cow position: chr25:9843043-9843230 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 156, 67

Conread position: 433-618
Cow position: chr25:14157489-14157679 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 142
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 101, 28

Conread position: 441-592
Cow position: chr25:11051405-11051554 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 443-592
Cow position: chr25:26642460-26642609 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 86

Conread position: 444-618
Cow position: chr25:11433075-11432891 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 445-592
Cow position: chr25:33557153-33557298 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 90, 100

Conread position: 449-592
Cow position: chr25:14117976-14118118 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 79, 0

Show alignments to all cow chromosomes.