Cow genome map

Conread name: rpigcf0_020369.y1

Conread position: 23-206
Cow position: chr26:6447934-6447744 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 118, 37

Conread position: 23-208
Cow position: chr26:26671074-26670882 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 148
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 122, 0

Conread position: 23-212
Cow position: chr26:15857347-15857545 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 119, 74

Conread position: 24-206
Cow position: chr26:4444663-4444469 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 29-200
Cow position: chr26:12661838-12661658 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 136
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 113, 69

Conread position: 29-200
Cow position: chr26:31856377-31856562 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 29-202
Cow position: chr26:31781621-31781803 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 29-203
Cow position: chr26:24226750-24226567 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 62

Conread position: 29-206
Cow position: chr26:2676343-2676154 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 29-206
Cow position: chr26:31794453-31794632 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 136
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 115, 74

Conread position: 29-206
Cow position: chr26:32770505-32770320 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 182

Conread position: 29-207
Cow position: chr26:6030086-6029899 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 113, 69

Conread position: 29-208
Cow position: chr26:6714609-6714418 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 0

Conread position: 29-208
Cow position: chr26:13706314-13706139 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 80, 75

Conread position: 29-208
Cow position: chr26:15561295-15561110 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 109, 147

Conread position: 29-212
Cow position: chr26:28397982-28398177 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 29-217
Cow position: chr26:13271004-13270800 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 108, 0

Conread position: 30-204
Cow position: chr26:29716749-29716935 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 107, 88

Conread position: 30-208
Cow position: chr26:2994995-2994808 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 110, 63

Conread position: 30-208
Cow position: chr26:19333619-19333439 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 112, 67

Conread position: 31-217
Cow position: chr26:28442334-28442134 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 158
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 61, 0

Conread position: 34-208
Cow position: chr26:10733105-10732921 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 106, 0

Conread position: 38-208
Cow position: chr26:3755924-3756098 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 385-590
Cow position: chr26:22152060-22152267 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 8, 135

Conread position: 387-517
Cow position: chr26:16721709-16721835 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 396-526
Cow position: chr26:1329393-1329523 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 55

Conread position: 396-599
Cow position: chr26:6475582-6475377 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 139
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 24, 134

Conread position: 397-544
Cow position: chr26:6252702-6252851 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 57, 23

Conread position: 397-618
Cow position: chr26:14175131-14175355 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 93, 27

Conread position: 397-618
Cow position: chr26:26888279-26888060 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 172
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 195, 23

Conread position: 399-587
Cow position: chr26:23583093-23582908 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 132
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 399-592
Cow position: chr26:13706151-13705955 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 21

Conread position: 399-594
Cow position: chr26:25393884-25394077 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 141, 21

Conread position: 399-618
Cow position: chr26:13021292-13021072 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 190, 21

Conread position: 399-618
Cow position: chr26:23315623-23315847 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 141, 21

Conread position: 400-592
Cow position: chr26:20769709-20769893 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 136, 20

Conread position: 400-618
Cow position: chr26:20291829-20291619 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 189, 73

Conread position: 400-618
Cow position: chr26:21637179-21636964 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 126, 22

Conread position: 400-618
Cow position: chr26:26950591-26950382 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 132, 20

Conread position: 401-594
Cow position: chr26:28251000-28251196 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 54, 185

Conread position: 401-618
Cow position: chr26:9491779-9491995 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 19, 95

Conread position: 401-618
Cow position: chr26:35704245-35704461 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 191, 20

Conread position: 402-535
Cow position: chr26:16549841-16549972 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 402-618
Cow position: chr26:12964840-12964624 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 134, 18

Conread position: 405-586
Cow position: chr26:31572111-31572282 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 405-587
Cow position: chr26:17148563-17148743 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 120, 15

Conread position: 405-591
Cow position: chr26:22892585-22892404 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 21, 15

Conread position: 405-592
Cow position: chr26:5306995-5307185 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 148
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 93, 15

Conread position: 405-592
Cow position: chr26:19445986-19446175 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 120, 16

Conread position: 405-592
Cow position: chr26:33736691-33736512 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 406-597
Cow position: chr26:24280688-24280871 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 406-618
Cow position: chr26:8642800-8643014 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 17, 190

Conread position: 406-618
Cow position: chr26:27491642-27491428 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 121, 128

Conread position: 408-618
Cow position: chr26:647860-647653 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 66

Conread position: 411-614
Cow position: chr26:10747759-10747565 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 182, 13

Conread position: 419-536
Cow position: chr26:9867245-9867128 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 419-537
Cow position: chr26:20846499-20846617 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 104, 79

Conread position: 419-562
Cow position: chr26:7525596-7525460 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 108, 71

Conread position: 419-587
Cow position: chr26:32013499-32013670 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 419-620
Cow position: chr26:32897999-32897794 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 106, 130

Conread position: 420-576
Cow position: chr26:9535391-9535544 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 50, 0

Conread position: 420-618
Cow position: chr26:12145246-12145045 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 53

Conread position: 421-617
Cow position: chr26:19110059-19110256 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 145
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 131, 20

Conread position: 421-618
Cow position: chr26:31605280-31605479 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 57, 51

Conread position: 426-618
Cow position: chr26:8811009-8811200 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 162, 96

Conread position: 430-590
Cow position: chr26:8341338-8341496 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 156, 24

Conread position: 431-618
Cow position: chr26:18651750-18651563 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 155, 97

Conread position: 432-578
Cow position: chr26:35302344-35302196 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 52, 0

Conread position: 441-592
Cow position: chr26:32955738-32955591 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 111, 81

Conread position: 463-618
Cow position: chr26:23924764-23924923 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 15

Show alignments to all cow chromosomes.