Cow genome map

Conread name: rpigcf0_020369.y1

Conread position: 16-216
Cow position: chr29:4327138-4327346 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 162
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 126, 0

Conread position: 23-195
Cow position: chr29:2481682-2481500 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 23-200
Cow position: chr29:30028781-30028592 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 23-205
Cow position: chr29:15944219-15944413 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 114, 0

Conread position: 23-206
Cow position: chr29:87363-87177 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 114, 57

Conread position: 23-206
Cow position: chr29:26130443-26130628 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 62

Conread position: 23-206
Cow position: chr29:29632287-29632092 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 113, 0

Conread position: 23-206
Cow position: chr29:35434520-35434715 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 114, 0

Conread position: 23-206
Cow position: chr29:36586229-36586423 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 52

Conread position: 23-208
Cow position: chr29:2744622-2744425 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 114, 0

Conread position: 23-208
Cow position: chr29:9638662-9638465 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 119, 0

Conread position: 23-224
Cow position: chr29:12309647-12309857 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 114, 0

Conread position: 24-200
Cow position: chr29:1325092-1325276 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 116, 0

Conread position: 27-206
Cow position: chr29:19792613-19792435 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 134
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 166, 109

Conread position: 27-206
Cow position: chr29:29974698-29974885 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 113, 51

Conread position: 29-196
Cow position: chr29:12798588-12798764 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 113, 84

Conread position: 29-200
Cow position: chr29:40096621-40096795 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 111, 0

Conread position: 29-202
Cow position: chr29:22935940-22936120 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 36

Conread position: 29-204
Cow position: chr29:1743388-1743564 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 71, 64

Conread position: 29-204
Cow position: chr29:3584469-3584282 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 116, 0

Conread position: 29-204
Cow position: chr29:35281159-35281345 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 108, 0

Conread position: 29-206
Cow position: chr29:2415151-2414972 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 108, 59

Conread position: 29-206
Cow position: chr29:8125937-8125750 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 113, 0

Conread position: 29-206
Cow position: chr29:17408989-17409175 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 6, 79

Conread position: 29-206
Cow position: chr29:17668162-17668340 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 126
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 29-206
Cow position: chr29:18748925-18748742 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 113, 69

Conread position: 29-206
Cow position: chr29:28621614-28621435 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 113, 83

Conread position: 29-206
Cow position: chr29:38581625-38581812 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 113, 0

Conread position: 29-207
Cow position: chr29:27702964-27703144 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 71, 64

Conread position: 29-208
Cow position: chr29:4120508-4120690 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 113, 68

Conread position: 29-208
Cow position: chr29:4480518-4480325 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 157
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 86, 0

Conread position: 29-208
Cow position: chr29:5892506-5892697 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 108, 70

Conread position: 29-208
Cow position: chr29:7666373-7666184 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 142
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 29-208
Cow position: chr29:9332800-9332996 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 108, 0

Conread position: 29-208
Cow position: chr29:18212321-18212135 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 26, 83

Conread position: 29-208
Cow position: chr29:19761931-19762123 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 155
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 110, 68

Conread position: 29-208
Cow position: chr29:26263511-26263697 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 148

Conread position: 29-208
Cow position: chr29:36216775-36216964 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 116, 72

Conread position: 29-208
Cow position: chr29:40117227-40117413 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 76, 64

Conread position: 29-208
Cow position: chr29:40764015-40763834 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 113, 63

Conread position: 29-208
Cow position: chr29:45650682-45650497 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 33

Conread position: 29-214
Cow position: chr29:2136443-2136245 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 112, 0

Conread position: 29-238
Cow position: chr29:25423481-25423698 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 64

Conread position: 29-251
Cow position: chr29:732282-732515 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 109, 74

Conread position: 30-208
Cow position: chr29:36530521-36530714 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 112, 32

Conread position: 32-210
Cow position: chr29:12005105-12004916 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 109, 0

Conread position: 33-193
Cow position: chr29:31943505-31943661 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 33-208
Cow position: chr29:37719572-37719757 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 133
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 109, 0

Conread position: 41-206
Cow position: chr29:36037380-36037544 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 104, 0

Conread position: 388-613
Cow position: chr29:31674454-31674682 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 164
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 143, 35

Conread position: 390-539
Cow position: chr29:22778359-22778202 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 390-578
Cow position: chr29:43009257-43009075 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 137, 0

Conread position: 390-592
Cow position: chr29:26615902-26615697 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 34, 143

Conread position: 390-602
Cow position: chr29:4875069-4874852 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 202

Conread position: 390-618
Cow position: chr29:9709522-9709749 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 169
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 183, 30

Conread position: 390-618
Cow position: chr29:44682273-44682050 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 30, 83

Conread position: 394-573
Cow position: chr29:10818605-10818430 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 26, 0

Conread position: 394-613
Cow position: chr29:22162423-22162200 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 198, 26

Conread position: 396-524
Cow position: chr29:4065918-4066045 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 398-618
Cow position: chr29:27826360-27826574 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 196, 22

Conread position: 399-532
Cow position: chr29:19125178-19125310 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 399-532
Cow position: chr29:21000478-21000609 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 399-535
Cow position: chr29:29974879-29975014 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 130, 21

Conread position: 399-576
Cow position: chr29:26734866-26735036 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 399-590
Cow position: chr29:23984124-23983936 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 21

Conread position: 399-591
Cow position: chr29:5186660-5186471 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 147, 21

Conread position: 399-592
Cow position: chr29:19762111-19762294 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 399-592
Cow position: chr29:34773899-34773714 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 399-592
Cow position: chr29:36530702-36530890 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 116, 21

Conread position: 399-614
Cow position: chr29:45005788-45005579 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 181, 21

Conread position: 399-617
Cow position: chr29:12679993-12680209 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 193, 22

Conread position: 399-618
Cow position: chr29:4480337-4480119 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 184, 21

Conread position: 399-618
Cow position: chr29:24103710-24103487 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 168
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 137, 21

Conread position: 399-618
Cow position: chr29:32211221-32211017 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 400-618
Cow position: chr29:9718933-9718718 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 402-618
Cow position: chr29:10156468-10156251 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 191, 181

Conread position: 405-592
Cow position: chr29:1124496-1124678 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 120, 15

Conread position: 405-592
Cow position: chr29:1556773-1556954 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 405-614
Cow position: chr29:36216956-36217162 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 153
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 110

Conread position: 405-618
Cow position: chr29:11562453-11562667 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 95

Conread position: 405-618
Cow position: chr29:25737577-25737360 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 161
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 184, 15

Conread position: 411-541
Cow position: chr29:30188496-30188361 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 418-592
Cow position: chr29:31594277-31594104 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 110, 0

Conread position: 418-614
Cow position: chr29:17109821-17110007 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 180, 93

Conread position: 418-618
Cow position: chr29:10456706-10456511 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 176, 109

Conread position: 419-578
Cow position: chr29:2984738-2984900 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 124

Conread position: 419-591
Cow position: chr29:23244026-23243856 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 137
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 109, 0

Conread position: 419-591
Cow position: chr29:29769497-29769329 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 109, 0

Conread position: 419-616
Cow position: chr29:22714870-22714671 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 160, 103

Conread position: 419-617
Cow position: chr29:29314801-29314599 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 132, 109

Conread position: 419-617
Cow position: chr29:39111461-39111258 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 153
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 117, 104

Conread position: 419-618
Cow position: chr29:4520189-4520390 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 103, 0

Conread position: 419-618
Cow position: chr29:25091966-25092160 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 128, 91

Conread position: 419-618
Cow position: chr29:29176759-29176563 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 13

Conread position: 420-591
Cow position: chr29:43328495-43328666 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 129, 142

Conread position: 420-618
Cow position: chr29:20903429-20903236 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 139
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 113, 33

Conread position: 420-618
Cow position: chr29:40166100-40166298 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 6, 71

Conread position: 423-592
Cow position: chr29:22613284-22613453 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 426-592
Cow position: chr29:27329753-27329916 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 102, 0

Conread position: 438-591
Cow position: chr29:34359107-34358956 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 108, 55

Show alignments to all cow chromosomes.