Cow genome map

Conread name: rpigcf0_020369.y1

Conread position: 16-208
Cow position: chr4:10731857-10732063 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 154
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 121, 46

Conread position: 17-208
Cow position: chr4:3990984-3990780 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 22-200
Cow position: chr4:53832694-53832877 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 119, 160

Conread position: 23-186
Cow position: chr4:32250094-32250252 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 23-200
Cow position: chr4:55271113-55270928 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 47, 70

Conread position: 23-204
Cow position: chr4:7249925-7249728 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 114, 0

Conread position: 23-206
Cow position: chr4:4981617-4981811 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 114, 74

Conread position: 23-206
Cow position: chr4:5610425-5610236 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 119, 76

Conread position: 23-206
Cow position: chr4:14742903-14743098 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 114, 0

Conread position: 23-206
Cow position: chr4:24671532-24671339 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 148
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 122, 80

Conread position: 23-206
Cow position: chr4:61972831-61972636 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 146
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 114, 94

Conread position: 23-208
Cow position: chr4:13589738-13589931 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 74

Conread position: 23-209
Cow position: chr4:16814126-16813931 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 74

Conread position: 23-217
Cow position: chr4:15872077-15871870 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 161
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 76, 57

Conread position: 24-207
Cow position: chr4:13142878-13142693 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 81, 38

Conread position: 27-208
Cow position: chr4:44839235-44839044 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 115, 43

Conread position: 28-208
Cow position: chr4:14812874-14812689 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 115, 42

Conread position: 29-204
Cow position: chr4:3132933-3133108 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 128
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 74

Conread position: 29-205
Cow position: chr4:54479528-54479343 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 113, 68

Conread position: 29-206
Cow position: chr4:9664-9477 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 112, 84

Conread position: 29-206
Cow position: chr4:1915925-1915739 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 148
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 117, 75

Conread position: 29-206
Cow position: chr4:23311610-23311427 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 101

Conread position: 29-206
Cow position: chr4:37553394-37553205 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 150
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 113, 0

Conread position: 29-206
Cow position: chr4:37620237-37620049 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 106, 0

Conread position: 29-206
Cow position: chr4:53208889-53209074 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 120, 0

Conread position: 29-207
Cow position: chr4:3388198-3388384 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 86, 0

Conread position: 29-207
Cow position: chr4:20117197-20117008 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 113, 27

Conread position: 29-208
Cow position: chr4:5984395-5984200 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 113, 0

Conread position: 29-208
Cow position: chr4:7429972-7430164 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 157
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 108, 63

Conread position: 29-208
Cow position: chr4:10993893-10993710 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 139
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 94, 9

Conread position: 29-208
Cow position: chr4:11100014-11099828 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 73, 33

Conread position: 29-208
Cow position: chr4:11901910-11901722 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 108, 69

Conread position: 29-208
Cow position: chr4:12591560-12591368 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 154
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 109, 35

Conread position: 29-208
Cow position: chr4:16799538-16799352 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 136
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 76, 52

Conread position: 29-208
Cow position: chr4:19096945-19097132 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 113, 64

Conread position: 29-208
Cow position: chr4:21392147-21391972 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 117, 59

Conread position: 29-208
Cow position: chr4:22743979-22744166 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 84, 78

Conread position: 29-208
Cow position: chr4:38181343-38181523 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 102

Conread position: 29-208
Cow position: chr4:38999084-38999267 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 146
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 113, 59

Conread position: 29-208
Cow position: chr4:46274843-46275034 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 113, 163

Conread position: 29-208
Cow position: chr4:48152720-48152523 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 40, 0

Conread position: 29-208
Cow position: chr4:51898652-51898848 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 149
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 0

Conread position: 29-208
Cow position: chr4:53100456-53100650 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 29-208
Cow position: chr4:56233342-56233528 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 115, 55

Conread position: 29-208
Cow position: chr4:56852550-56852740 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 113, 64

Conread position: 29-208
Cow position: chr4:58248061-58248248 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 113, 70

Conread position: 29-209
Cow position: chr4:13694019-13693836 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 89, 46

Conread position: 29-209
Cow position: chr4:47730521-47730704 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 77, 64

Conread position: 29-209
Cow position: chr4:59871155-59871334 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 75

Conread position: 29-210
Cow position: chr4:11091030-11090844 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 29-210
Cow position: chr4:30574106-30574298 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 173

Conread position: 29-211
Cow position: chr4:9795721-9795526 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 150
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 29-212
Cow position: chr4:39009619-39009810 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 100, 74

Conread position: 29-212
Cow position: chr4:62471718-62471913 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 108, 0

Conread position: 29-213
Cow position: chr4:38935029-38935205 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 137
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 100, 21

Conread position: 29-214
Cow position: chr4:61450418-61450616 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 152
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 111, 0

Conread position: 29-217
Cow position: chr4:15904751-15904948 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 108, 74

Conread position: 29-217
Cow position: chr4:39231873-39231673 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 30-195
Cow position: chr4:41186714-41186539 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 112, 67

Conread position: 30-202
Cow position: chr4:19497596-19497416 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 112, 62

Conread position: 30-206
Cow position: chr4:11201471-11201656 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 107, 61

Conread position: 30-206
Cow position: chr4:17112227-17112038 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 77, 0

Conread position: 30-206
Cow position: chr4:19265224-19265411 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 0

Conread position: 30-208
Cow position: chr4:23494579-23494772 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 30-208
Cow position: chr4:60897622-60897432 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 107, 0

Conread position: 31-200
Cow position: chr4:38799541-38799362 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 5, 0

Conread position: 31-206
Cow position: chr4:9815697-9815513 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 111, 66

Conread position: 32-206
Cow position: chr4:31023099-31023280 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 42

Conread position: 32-208
Cow position: chr4:48137567-48137754 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 149
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 94, 0

Conread position: 32-208
Cow position: chr4:62983884-62983709 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 165, 82

Conread position: 33-206
Cow position: chr4:65168351-65168170 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 104, 70

Conread position: 33-208
Cow position: chr4:561056-561246 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 109, 60

Conread position: 39-206
Cow position: chr4:63365714-63365544 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 98, 58

Conread position: 42-205
Cow position: chr4:14919673-14919836 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 89

Conread position: 42-206
Cow position: chr4:54455662-54455505 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 26

Conread position: 43-208
Cow position: chr4:10412045-10412219 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 7, 63

Conread position: 55-208
Cow position: chr4:623705-623543 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 364-616
Cow position: chr4:48165562-48165311 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 181
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 60, 16

Conread position: 385-594
Cow position: chr4:11331905-11332113 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 35, 144

Conread position: 387-618
Cow position: chr4:23599994-23600216 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 108

Conread position: 388-592
Cow position: chr4:21257307-21257107 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 149
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 32, 0

Conread position: 389-535
Cow position: chr4:56570621-56570772 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 389-592
Cow position: chr4:24002149-24001947 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 50

Conread position: 390-537
Cow position: chr4:24810621-24810474 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 145, 30

Conread position: 390-592
Cow position: chr4:16799371-16799168 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 26

Conread position: 390-592
Cow position: chr4:53208113-53208311 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 141
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 64

Conread position: 390-592
Cow position: chr4:62471890-62472097 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 143

Conread position: 390-616
Cow position: chr4:1026407-1026190 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 98

Conread position: 390-618
Cow position: chr4:20327890-20327660 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 169
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 30

Conread position: 390-618
Cow position: chr4:45644490-45644269 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 31, 122

Conread position: 390-618
Cow position: chr4:59277658-59277431 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 30, 103

Conread position: 391-531
Cow position: chr4:54479083-54478948 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 393-618
Cow position: chr4:62772104-62771871 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 28, 145

Conread position: 395-550
Cow position: chr4:17124472-17124316 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 95, 136

Conread position: 396-574
Cow position: chr4:2141571-2141750 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 115, 25

Conread position: 396-618
Cow position: chr4:3340777-3341001 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 156, 25

Conread position: 398-592
Cow position: chr4:17112048-17111855 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 99, 28

Conread position: 398-599
Cow position: chr4:10378936-10379136 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 195, 22

Conread position: 398-599
Cow position: chr4:37704093-37704294 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 154, 130

Conread position: 399-525
Cow position: chr4:44072937-44072812 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 399-533
Cow position: chr4:61391375-61391243 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 399-538
Cow position: chr4:36841112-36841251 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 101, 22

Conread position: 399-548
Cow position: chr4:28839454-28839605 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 21

Conread position: 399-582
Cow position: chr4:7430152-7430326 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 153, 21

Conread position: 399-587
Cow position: chr4:33357763-33357949 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 128, 21

Conread position: 399-590
Cow position: chr4:27292127-27291938 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 399-590
Cow position: chr4:31506203-31506008 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 123, 21

Conread position: 399-590
Cow position: chr4:51727905-51728093 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 140
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 399-590
Cow position: chr4:52748629-52748438 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 148, 21

Conread position: 399-591
Cow position: chr4:20299103-20299292 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 145
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 21, 0

Conread position: 399-591
Cow position: chr4:35981822-35982013 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 399-592
Cow position: chr4:3689537-3689722 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 133, 21

Conread position: 399-592
Cow position: chr4:21233045-21232856 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 147
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 105, 21

Conread position: 399-592
Cow position: chr4:33097147-33096959 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 136, 21

Conread position: 399-592
Cow position: chr4:33433435-33433238 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 22

Conread position: 399-592
Cow position: chr4:46550217-46550398 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 154, 21

Conread position: 399-592
Cow position: chr4:51898836-51899024 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 153, 22

Conread position: 399-599
Cow position: chr4:13693845-13693646 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 136, 22

Conread position: 399-599
Cow position: chr4:14470741-14470544 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 141, 21

Conread position: 399-608
Cow position: chr4:66112244-66112032 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 123, 21

Conread position: 399-614
Cow position: chr4:27529946-27530163 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 193, 18

Conread position: 399-618
Cow position: chr4:7571239-7571462 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 160, 21

Conread position: 399-618
Cow position: chr4:21391984-21391763 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 180, 21

Conread position: 399-618
Cow position: chr4:33612530-33612310 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 187, 21

Conread position: 399-618
Cow position: chr4:38944432-38944209 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 63, 21

Conread position: 399-618
Cow position: chr4:48485833-48486043 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 135, 22

Conread position: 399-618
Cow position: chr4:58881134-58880912 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 185, 21

Conread position: 400-614
Cow position: chr4:48152535-48152330 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 193, 50

Conread position: 400-616
Cow position: chr4:275293-275507 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 192, 20

Conread position: 400-618
Cow position: chr4:4185954-4186168 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 59, 20

Conread position: 400-618
Cow position: chr4:19497422-19497217 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 193, 20

Conread position: 400-618
Cow position: chr4:24744579-24744357 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 20

Conread position: 401-582
Cow position: chr4:19744714-19744896 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 134

Conread position: 402-608
Cow position: chr4:22236653-22236445 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 124

Conread position: 402-618
Cow position: chr4:23509424-23509642 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 18

Conread position: 402-620
Cow position: chr4:54190916-54191140 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 157
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 20, 132

Conread position: 403-535
Cow position: chr4:46552487-46552357 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 403-617
Cow position: chr4:3283617-3283399 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 80

Conread position: 404-572
Cow position: chr4:27540454-27540615 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 148, 69

Conread position: 404-618
Cow position: chr4:38952385-38952602 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 166
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 188, 124

Conread position: 404-618
Cow position: chr4:68387624-68387841 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 149
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 140, 118

Conread position: 405-536
Cow position: chr4:8413287-8413152 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 17, 28

Conread position: 405-537
Cow position: chr4:20147020-20147152 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 117, 41

Conread position: 405-584
Cow position: chr4:19463330-19463506 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 15, 0

Conread position: 405-590
Cow position: chr4:41602683-41602865 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 88

Conread position: 405-592
Cow position: chr4:12903650-12903839 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 141

Conread position: 405-592
Cow position: chr4:51851036-51851224 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 15

Conread position: 405-592
Cow position: chr4:62983715-62983535 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 140
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 405-611
Cow position: chr4:24458266-24458064 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 69

Conread position: 405-614
Cow position: chr4:37915503-37915291 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 135, 15

Conread position: 405-618
Cow position: chr4:8947228-8947444 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 111, 15

Conread position: 405-618
Cow position: chr4:19097120-19097336 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 18, 69

Conread position: 405-618
Cow position: chr4:19699935-19700144 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 159
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 21, 124

Conread position: 405-618
Cow position: chr4:34641897-34641677 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 80

Conread position: 405-618
Cow position: chr4:47348662-47348875 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 186, 15

Conread position: 405-618
Cow position: chr4:65919448-65919657 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 186, 15

Conread position: 406-618
Cow position: chr4:17186517-17186302 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 74, 15

Conread position: 406-618
Cow position: chr4:21064873-21065085 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 121, 33

Conread position: 406-620
Cow position: chr4:54455511-54455292 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 125

Conread position: 410-612
Cow position: chr4:31136590-31136798 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 118

Conread position: 411-614
Cow position: chr4:34630734-34630943 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 48

Conread position: 411-618
Cow position: chr4:13255929-13256131 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 180, 10

Conread position: 411-618
Cow position: chr4:33971060-33970848 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 64

Conread position: 411-618
Cow position: chr4:58248242-58248450 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 25

Conread position: 413-593
Cow position: chr4:36577785-36577611 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 171, 11

Conread position: 418-592
Cow position: chr4:19118853-19119035 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 106, 158

Conread position: 419-536
Cow position: chr4:19597468-19597352 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 111, 0

Conread position: 419-578
Cow position: chr4:18576925-18576766 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 112, 24

Conread position: 419-584
Cow position: chr4:14152936-14153105 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 54, 65

Conread position: 419-592
Cow position: chr4:36290476-36290642 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 112, 0

Conread position: 419-592
Cow position: chr4:38935204-38935377 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 145
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 113, 109

Conread position: 419-595
Cow position: chr4:56435656-56435825 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 419-599
Cow position: chr4:41867292-41867469 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 121, 70

Conread position: 419-614
Cow position: chr4:23847200-23847006 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 156
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 128, 104

Conread position: 419-614
Cow position: chr4:34337419-34337227 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 106, 53

Conread position: 419-614
Cow position: chr4:44449658-44449464 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 41, 77

Conread position: 419-614
Cow position: chr4:47730706-47730903 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 119, 24

Conread position: 419-618
Cow position: chr4:17774506-17774301 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 107

Conread position: 419-618
Cow position: chr4:21531796-21531595 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 136, 79

Conread position: 419-618
Cow position: chr4:29291367-29291563 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 164, 109

Conread position: 419-618
Cow position: chr4:61897688-61897486 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 63, 121

Conread position: 420-589
Cow position: chr4:19438309-19438480 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 110

Conread position: 420-618
Cow position: chr4:12049094-12049295 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 172, 113

Conread position: 420-618
Cow position: chr4:42922003-42921811 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 32, 80

Conread position: 420-618
Cow position: chr4:63096224-63096025 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 145
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 126, 30

Conread position: 421-533
Cow position: chr4:11872058-11871950 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 77, 0

Conread position: 421-559
Cow position: chr4:34223969-34224100 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 421-592
Cow position: chr4:47047743-47047913 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 133
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 421-599
Cow position: chr4:34022737-34022559 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 104, 123

Conread position: 422-618
Cow position: chr4:48409415-48409220 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 148
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 130, 44

Conread position: 426-599
Cow position: chr4:19408145-19407972 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 122
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 427-581
Cow position: chr4:22215796-22215646 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 427-592
Cow position: chr4:19435115-19435273 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 433-587
Cow position: chr4:21874036-21874188 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 103, 61

Conread position: 433-592
Cow position: chr4:25537407-25537565 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 125
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 440-618
Cow position: chr4:52832149-52831968 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 96, 55

Conread position: 455-618
Cow position: chr4:38157207-38157039 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 72, 85

Show alignments to all cow chromosomes.