Cow genome map

Conread name: rpigcf0_020369.y1

Conread position: 16-210
Cow position: chrX:7277599-7277796 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 60, 83

Conread position: 23-186
Cow position: chrX:31729136-31729309 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 128
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 23-194
Cow position: chrX:22812740-22812921 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 145
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 114, 0

Conread position: 23-195
Cow position: chrX:31250070-31250251 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 27

Conread position: 23-202
Cow position: chrX:2351740-2351931 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 115, 0

Conread position: 23-206
Cow position: chrX:12309710-12309516 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 119, 70

Conread position: 23-206
Cow position: chrX:27442874-27442683 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 118, 74

Conread position: 23-206
Cow position: chrX:42247498-42247311 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 82, 0

Conread position: 23-208
Cow position: chrX:13868375-13868568 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 152
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 119, 74

Conread position: 23-208
Cow position: chrX:27590355-27590165 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 144
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 70

Conread position: 23-208
Cow position: chrX:31373256-31373443 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 151
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 119, 52

Conread position: 23-208
Cow position: chrX:34441769-34441577 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 119, 70

Conread position: 23-210
Cow position: chrX:31949252-31949053 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 156
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 114, 21

Conread position: 23-211
Cow position: chrX:39556138-39555938 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 159
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 114, 70

Conread position: 23-217
Cow position: chrX:19019414-19019223 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 172, 87

Conread position: 27-208
Cow position: chrX:2524048-2523851 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 154
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 110, 0

Conread position: 28-208
Cow position: chrX:35409351-35409534 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 109, 156

Conread position: 29-195
Cow position: chrX:1055709-1055528 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 40, 0

Conread position: 29-200
Cow position: chrX:9651361-9651179 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 115, 85

Conread position: 29-200
Cow position: chrX:40481187-40481006 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 79, 11

Conread position: 29-200
Cow position: chrX:41790756-41790578 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 29-200
Cow position: chrX:48247149-48246970 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 138
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 38

Conread position: 29-201
Cow position: chrX:16790139-16789970 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 10, 54

Conread position: 29-204
Cow position: chrX:5640935-5640762 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 105, 0

Conread position: 29-204
Cow position: chrX:6234750-6234576 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 168, 16

Conread position: 29-205
Cow position: chrX:38218402-38218579 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 113, 68

Conread position: 29-206
Cow position: chrX:616719-616532 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 62

Conread position: 29-206
Cow position: chrX:8899708-8899897 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 108, 0

Conread position: 29-206
Cow position: chrX:10412302-10412116 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 147
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 113, 0

Conread position: 29-206
Cow position: chrX:10915722-10915911 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 29-206
Cow position: chrX:17794679-17794858 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 70, 83

Conread position: 29-206
Cow position: chrX:21592970-21593160 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 150
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 108, 68

Conread position: 29-206
Cow position: chrX:31489196-31489384 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 149
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 115, 0

Conread position: 29-206
Cow position: chrX:34502607-34502791 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 142
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 113, 68

Conread position: 29-206
Cow position: chrX:38439158-38439347 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 97, 13

Conread position: 29-206
Cow position: chrX:38967335-38967523 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 18, 54

Conread position: 29-206
Cow position: chrX:42507960-42507774 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 113, 68

Conread position: 29-206
Cow position: chrX:46771288-46771097 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 110, 0

Conread position: 29-206
Cow position: chrX:47967284-47967472 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 77, 0

Conread position: 29-206
Cow position: chrX:48287756-48287581 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 113, 0

Conread position: 29-207
Cow position: chrX:29049659-29049844 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 113, 64

Conread position: 29-208
Cow position: chrX:917686-917497 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 143
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 79, 0

Conread position: 29-208
Cow position: chrX:2786862-2786674 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 136
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 29-208
Cow position: chrX:7718540-7718733 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 113, 68

Conread position: 29-208
Cow position: chrX:11718096-11717909 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 144
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 113, 173

Conread position: 29-208
Cow position: chrX:22115598-22115403 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 29-208
Cow position: chrX:28847192-28847004 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 147
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 113, 63

Conread position: 29-208
Cow position: chrX:31443136-31442947 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 35

Conread position: 29-208
Cow position: chrX:37232095-37232288 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 31, 0

Conread position: 29-208
Cow position: chrX:38007084-38006889 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 156
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 108, 148

Conread position: 29-208
Cow position: chrX:38963795-38963981 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 147
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 36, 70

Conread position: 29-208
Cow position: chrX:41192374-41192561 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 97, 0

Conread position: 29-208
Cow position: chrX:42733549-42733740 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 115, 0

Conread position: 29-209
Cow position: chrX:16722123-16721926 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 29-209
Cow position: chrX:34532215-34532404 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 97, 0

Conread position: 29-213
Cow position: chrX:7571590-7571787 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 108, 0

Conread position: 29-214
Cow position: chrX:12115725-12115920 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 149
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 78

Conread position: 29-220
Cow position: chrX:15545581-15545782 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 160
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 108, 171

Conread position: 30-205
Cow position: chrX:28134034-28134218 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 111, 74

Conread position: 30-210
Cow position: chrX:7645943-7646137 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 31-198
Cow position: chrX:7695450-7695623 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 111, 25

Conread position: 31-206
Cow position: chrX:8796937-8797120 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 111, 25

Conread position: 31-208
Cow position: chrX:38936385-38936575 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 31-213
Cow position: chrX:40557990-40557798 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 106, 170

Conread position: 32-206
Cow position: chrX:151588-151773 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 109, 155

Conread position: 32-208
Cow position: chrX:41879243-41879057 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 144
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 110, 33

Conread position: 33-196
Cow position: chrX:34564988-34565156 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 110, 58

Conread position: 33-206
Cow position: chrX:7350990-7351168 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 104, 64

Conread position: 39-208
Cow position: chrX:33466311-33466486 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 87, 161

Conread position: 45-206
Cow position: chrX:33020186-33020358 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 139
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 97, 0

Conread position: 47-206
Cow position: chrX:41238661-41238493 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 95, 0

Conread position: 52-208
Cow position: chrX:22482982-22482810 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 136
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 73, 0

Conread position: 59-206
Cow position: chrX:46033004-46032849 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 93, 0

Conread position: 62-206
Cow position: chrX:13923144-13923291 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 78-208
Cow position: chrX:17725711-17725849 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 384-525
Cow position: chrX:17908439-17908300 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 388-557
Cow position: chrX:31256718-31256884 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 120
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 388-618
Cow position: chrX:9651174-9650941 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 6

Conread position: 388-618
Cow position: chrX:40035594-40035357 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 35, 76

Conread position: 389-618
Cow position: chrX:24288073-24287850 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 65

Conread position: 390-536
Cow position: chrX:11655944-11656091 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 390-614
Cow position: chrX:38853052-38853276 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 199, 30

Conread position: 390-618
Cow position: chrX:24365978-24365738 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 390-618
Cow position: chrX:29601977-29601745 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 157
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 148, 138

Conread position: 390-618
Cow position: chrX:35224149-35224379 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 47

Conread position: 391-599
Cow position: chrX:34192527-34192730 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 30

Conread position: 396-592
Cow position: chrX:19273863-19273655 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 31, 24

Conread position: 396-618
Cow position: chrX:40557821-40557596 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 159, 24

Conread position: 397-618
Cow position: chrX:6544117-6544337 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 156
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 196, 25

Conread position: 397-618
Cow position: chrX:21986431-21986208 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 181, 23

Conread position: 398-600
Cow position: chrX:41027020-41027220 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 124, 21

Conread position: 398-614
Cow position: chrX:20584185-20584407 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 148, 124

Conread position: 398-618
Cow position: chrX:37910307-37910528 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 149, 95

Conread position: 399-519
Cow position: chrX:10366363-10366244 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 94
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 399-520
Cow position: chrX:35273219-35273338 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 399-533
Cow position: chrX:35388039-35387907 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 399-567
Cow position: chrX:41884551-41884384 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 153, 21

Conread position: 399-576
Cow position: chrX:34401861-34402036 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 399-590
Cow position: chrX:1616181-1615991 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 155, 21

Conread position: 399-591
Cow position: chrX:13785500-13785309 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 152
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 21, 0

Conread position: 399-591
Cow position: chrX:26876020-26875830 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 138
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 399-592
Cow position: chrX:33493641-33493831 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 399-592
Cow position: chrX:37232276-37232459 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 80, 22

Conread position: 399-592
Cow position: chrX:40269351-40269543 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 138, 21

Conread position: 399-608
Cow position: chrX:7509005-7509213 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 194, 21

Conread position: 399-614
Cow position: chrX:616399-616180 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 126, 21

Conread position: 399-614
Cow position: chrX:11939064-11938854 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 160
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 183, 21

Conread position: 399-614
Cow position: chrX:13382192-13382403 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 21

Conread position: 399-617
Cow position: chrX:619141-618920 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 185, 21

Conread position: 399-618
Cow position: chrX:8869539-8869319 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 136, 21

Conread position: 399-618
Cow position: chrX:14884095-14883873 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 193, 21

Conread position: 399-618
Cow position: chrX:21672418-21672643 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 153
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 49, 21

Conread position: 399-618
Cow position: chrX:27432051-27431835 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 195, 21

Conread position: 399-618
Cow position: chrX:29542356-29542134 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 159, 21

Conread position: 399-618
Cow position: chrX:31252281-31252491 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 21

Conread position: 399-618
Cow position: chrX:31311892-31312112 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 193, 21

Conread position: 399-618
Cow position: chrX:37781251-37781026 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 173
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 21, 132

Conread position: 399-618
Cow position: chrX:38006901-38006687 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 161
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 181, 21

Conread position: 400-594
Cow position: chrX:5118639-5118448 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 103, 0

Conread position: 400-618
Cow position: chrX:34411707-34411929 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 161
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 126, 32

Conread position: 400-620
Cow position: chrX:13647922-13647700 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 126, 104

Conread position: 401-537
Cow position: chrX:11806148-11806015 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 401-586
Cow position: chrX:34990898-34991082 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 19, 93

Conread position: 401-616
Cow position: chrX:45976785-45977007 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 47, 19

Conread position: 402-592
Cow position: chrX:9201415-9201600 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 140
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 126, 0

Conread position: 403-507
Cow position: chrX:27145490-27145593 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 85
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 403-591
Cow position: chrX:41870940-41871118 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 403-593
Cow position: chrX:6413911-6414100 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 43, 17

Conread position: 403-618
Cow position: chrX:9365810-9365593 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 113

Conread position: 404-592
Cow position: chrX:13912947-13913127 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 142, 16

Conread position: 404-618
Cow position: chrX:878513-878297 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 19, 69

Conread position: 404-618
Cow position: chrX:13177597-13177393 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 163
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 177, 16

Conread position: 405-580
Cow position: chrX:42381233-42381058 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 45, 18

Conread position: 405-590
Cow position: chrX:19015307-19015487 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 119, 15

Conread position: 405-591
Cow position: chrX:37574719-37574891 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 405-616
Cow position: chrX:33855366-33855138 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 15, 176

Conread position: 405-617
Cow position: chrX:34441583-34441372 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 40, 15

Conread position: 405-618
Cow position: chrX:7571773-7571988 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 184, 15

Conread position: 405-618
Cow position: chrX:7695617-7695832 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 160
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 48, 15

Conread position: 405-618
Cow position: chrX:29680391-29680178 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 178, 15

Conread position: 405-618
Cow position: chrX:31436347-31436557 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 184, 16

Conread position: 405-618
Cow position: chrX:34313896-34314107 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 28, 23

Conread position: 405-618
Cow position: chrX:34532391-34532603 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 160
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 151, 14

Conread position: 405-618
Cow position: chrX:35542764-35542970 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 97, 15

Conread position: 405-618
Cow position: chrX:45845968-45846184 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 119, 15

Conread position: 409-617
Cow position: chrX:18695053-18694849 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 17, 44

Conread position: 411-539
Cow position: chrX:30832973-30832846 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 111, 82

Conread position: 411-600
Cow position: chrX:42247311-42247121 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 40

Conread position: 411-618
Cow position: chrX:39558478-39558265 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 16, 125

Conread position: 411-619
Cow position: chrX:41068595-41068809 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 34, 18

Conread position: 419-565
Cow position: chrX:47484386-47484239 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 127

Conread position: 419-584
Cow position: chrX:4750422-4750258 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 155, 108

Conread position: 419-591
Cow position: chrX:40685449-40685277 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 133
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 109

Conread position: 419-592
Cow position: chrX:36067899-36068067 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 107, 13

Conread position: 419-594
Cow position: chrX:22074682-22074850 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 113, 71

Conread position: 419-614
Cow position: chrX:42171414-42171215 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 159, 103

Conread position: 419-618
Cow position: chrX:8797133-8797332 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 7, 111

Conread position: 419-618
Cow position: chrX:17725856-17726058 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 161, 109

Conread position: 419-618
Cow position: chrX:23514133-23513934 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 141
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 172, 113

Conread position: 419-618
Cow position: chrX:42470059-42469858 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 116, 43

Conread position: 420-573
Cow position: chrX:38439361-38439514 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 420-587
Cow position: chrX:26881685-26881518 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 421-618
Cow position: chrX:40826871-40826668 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 14, 126

Conread position: 423-591
Cow position: chrX:34792422-34792260 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 122
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 423-592
Cow position: chrX:42927933-42927772 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 105, 0

Conread position: 423-592
Cow position: chrX:45414414-45414252 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 428-532
Cow position: chrX:29229901-29230004 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 91
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 92, 0

Conread position: 440-618
Cow position: chrX:9252256-9252080 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 139
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 10

Conread position: 445-592
Cow position: chrX:1466069-1466214 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 446-577
Cow position: chrX:918818-918688 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 106, 82

Conread position: 446-618
Cow position: chrX:29050156-29050330 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 92, 82

Show alignments to all cow chromosomes.