Cow genome map

Conread name: rplac_12375.y1

Conread position: 2-448
Cow position:
Alignm length: 447
Alignm identity: 412
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 20-443
Cow position:
Alignm length: 425
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 84

Conread position: 67-448
Cow position:
Alignm length: 385
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 14

Conread position: 68-433
Cow position:
Alignm length: 375
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 58

Conread position: 72-441
Cow position:
Alignm length: 372
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 78-443
Cow position:
Alignm length: 368
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 296

Conread position: 79-406
Cow position:
Alignm length: 328
Alignm identity: 217
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 21, 0

Conread position: 79-443
Cow position:
Alignm length: 369
Alignm identity: 247
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 19, 25

Conread position: 80-431
Cow position:
Alignm length: 354
Alignm identity: 241
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 52, 17

Conread position: 80-444
Cow position:
Alignm length: 368
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 20

Conread position: 80-448
Cow position:
Alignm length: 369
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 83-448
Cow position:
Alignm length: 368
Alignm identity: 246
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 231, 18

Conread position: 84-377
Cow position:
Alignm length: 295
Alignm identity: 196
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 252, 13

Conread position: 84-377
Cow position:
Alignm length: 296
Alignm identity: 201
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 20, 152

Conread position: 84-448
Cow position:
Alignm length: 367
Alignm identity: 237
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 14

Conread position: 100-443
Cow position:
Alignm length: 345
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 123

Conread position: 101-293
Cow position:
Alignm length: 194
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 20

Conread position: 101-448
Cow position:
Alignm length: 352
Alignm identity: 235
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 129, 136

Conread position: 101-448
Cow position:
Alignm length: 349
Alignm identity: 233
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 218, 207

Conread position: 102-417
Cow position:
Alignm length: 317
Alignm identity: 213
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 42, 19

Conread position: 102-440
Cow position:
Alignm length: 340
Alignm identity: 206
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 296, 276

Conread position: 102-441
Cow position:
Alignm length: 340
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 102-441
Cow position:
Alignm length: 340
Alignm identity: 212
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 102-442
Cow position:
Alignm length: 341
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 102-443
Cow position:
Alignm length: 342
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 102-443
Cow position:
Alignm length: 343
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 115

Conread position: 102-445
Cow position:
Alignm length: 344
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 102-448
Cow position:
Alignm length: 347
Alignm identity: 234
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-386
Cow position:
Alignm length: 287
Alignm identity: 179
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 103-434
Cow position:
Alignm length: 333
Alignm identity: 220
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 63, 74

Conread position: 103-435
Cow position:
Alignm length: 334
Alignm identity: 217
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 302, 296

Conread position: 103-435
Cow position:
Alignm length: 333
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 103-448
Cow position:
Alignm length: 346
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 108-446
Cow position:
Alignm length: 342
Alignm identity: 219
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 125, 114

Conread position: 111-336
Cow position:
Alignm length: 226
Alignm identity: 149
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 111-345
Cow position:
Alignm length: 235
Alignm identity: 149
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 111-435
Cow position:
Alignm length: 328
Alignm identity: 226
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 116, 112

Conread position: 111-448
Cow position:
Alignm length: 341
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 56

Conread position: 112-371
Cow position:
Alignm length: 262
Alignm identity: 177
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 230, 0

Conread position: 112-395
Cow position:
Alignm length: 285
Alignm identity: 190
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 212, 217

Conread position: 112-421
Cow position:
Alignm length: 311
Alignm identity: 214
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 13, 9

Conread position: 112-421
Cow position:
Alignm length: 310
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 112-441
Cow position:
Alignm length: 332
Alignm identity: 219
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 25, 9

Conread position: 112-441
Cow position:
Alignm length: 330
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 112-443
Cow position:
Alignm length: 332
Alignm identity: 220
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 112-446
Cow position:
Alignm length: 337
Alignm identity: 222
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 13, 6

Conread position: 124-360
Cow position:
Alignm length: 238
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 92, 86

Conread position: 130-442
Cow position:
Alignm length: 313
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 131-379
Cow position:
Alignm length: 249
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 141-448
Cow position:
Alignm length: 309
Alignm identity: 198
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 82

Conread position: 142-424
Cow position:
Alignm length: 284
Alignm identity: 186
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 280, 0

Conread position: 142-429
Cow position:
Alignm length: 288
Alignm identity: 197
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 147-443
Cow position:
Alignm length: 298
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 160

Conread position: 149-373
Cow position:
Alignm length: 229
Alignm identity: 153
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 63, 68

Conread position: 149-444
Cow position:
Alignm length: 296
Alignm identity: 196
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 150-424
Cow position:
Alignm length: 275
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 150-432
Cow position:
Alignm length: 284
Alignm identity: 185
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 268, 43

Conread position: 151-387
Cow position:
Alignm length: 238
Alignm identity: 166
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 228, 0

Conread position: 151-435
Cow position:
Alignm length: 286
Alignm identity: 182
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 240, 252

Conread position: 169-435
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 0, 0

Conread position: 174-443
Cow position:
Alignm length: 272
Alignm identity: 175
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 48

Conread position: 175-434
Cow position:
Alignm length: 260
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 12, 0

Conread position: 175-434
Cow position:
Alignm length: 260
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 175-448
Cow position:
Alignm length: 275
Alignm identity: 173
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 122, 131

Conread position: 176-433
Cow position:
Alignm length: 260
Alignm identity: 186
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 11, 140

Conread position: 178-440
Cow position:
Alignm length: 263
Alignm identity: 166
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 187-426
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 25, 20

Conread position: 187-445
Cow position:
Alignm length: 260
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 120

Conread position: 191-433
Cow position:
Alignm length: 245
Alignm identity: 160
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 116, 106

Conread position: 193-443
Cow position:
Alignm length: 252
Alignm identity: 167
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 108, 114

Conread position: 235-436
Cow position:
Alignm length: 204
Alignm identity: 138
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 56

Conread position: 253-443
Cow position:
Alignm length: 191
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 255-448
Cow position:
Alignm length: 194
Alignm identity: 139
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 258-441
Cow position:
Alignm length: 184
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 261-448
Cow position:
Alignm length: 188
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 271-444
Cow position:
Alignm length: 175
Alignm identity: 124
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 133, 128

Show alignments to all cow chromosomes.