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Cow genome map

           
Conread name:
           
rplac_3633.y1
        

               
Conread position:
               
133-397
               

               
Cow position:
               
chr12:29966019-29966273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
80, 62
               

               
Conread position:
               
140-399
               

               
Cow position:
               
chr12:38774322-38774075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
69, 30
               

               
Conread position:
               
141-399
               

               
Cow position:
               
chr12:10827705-10827956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
66, 151
               

               
Conread position:
               
142-311
               

               
Cow position:
               
chr12:42760135-42759966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 54
               

               
Conread position:
               
142-395
               

               
Cow position:
               
chr12:3454600-3454863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
34, 196
               

               
Conread position:
               
143-292
               

               
Cow position:
               
chr12:15700000-15700155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
143-394
               

               
Cow position:
               
chr12:35652934-35652702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
143-398
               

               
Cow position:
               
chr12:18103685-18103448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
144-281
               

               
Cow position:
               
chr12:8868951-8868818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
144-294
               

               
Cow position:
               
chr12:19691309-19691157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
144-382
               

               
Cow position:
               
chr12:48415589-48415367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
144-399
               

               
Cow position:
               
chr12:25027846-25027586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 172
               

               
Conread position:
               
144-399
               

               
Cow position:
               
chr12:31269076-31269328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
8, 164
               

               
Conread position:
               
144-401
               

               
Cow position:
               
chr12:6720249-6720520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
148-390
               

               
Cow position:
               
chr12:45168092-45167847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 136
               

               
Conread position:
               
149-394
               

               
Cow position:
               
chr12:36012685-36012447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
149-398
               

               
Cow position:
               
chr12:35368570-35368813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
64, 172
               

               
Conread position:
               
150-295
               

               
Cow position:
               
chr12:39663271-39663122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
150-307
               

               
Cow position:
               
chr12:15173752-15173913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
150-393
               

               
Cow position:
               
chr12:19502499-19502250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
150-396
               

               
Cow position:
               
chr12:12637255-12637018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
5, 131
               

               
Conread position:
               
150-396
               

               
Cow position:
               
chr12:33976129-33976370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 12
               

               
Conread position:
               
150-398
               

               
Cow position:
               
chr12:7086091-7086350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 10
               

               
Conread position:
               
150-398
               

               
Cow position:
               
chr12:42749370-42749611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
68, 10
               

               
Conread position:
               
150-399
               

               
Cow position:
               
chr12:6206264-6206504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
150-404
               

               
Cow position:
               
chr12:29675209-29674964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
59, 33
               

               
Conread position:
               
151-381
               

               
Cow position:
               
chr12:8075771-8075528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
151-392
               

               
Cow position:
               
chr12:38126594-38126358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
151-397
               

               
Cow position:
               
chr12:33625478-33625235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
17, 173
               

               
Conread position:
               
151-399
               

               
Cow position:
               
chr12:34473687-34473438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
145, 34
               

               
Conread position:
               
152-309
               

               
Cow position:
               
chr12:3623625-3623786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
152-311
               

               
Cow position:
               
chr12:18766042-18765879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
152-315
               

               
Cow position:
               
chr12:41474022-41474187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 8
               

               
Conread position:
               
152-316
               

               
Cow position:
               
chr12:23798032-23798198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
152-321
               

               
Cow position:
               
chr12:3599828-3599657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
57, 78
               

               
Conread position:
               
152-323
               

               
Cow position:
               
chr12:31959817-31959985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
152-378
               

               
Cow position:
               
chr12:37993801-37993573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
61, 177
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr12:5635521-5635296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 8
               

               
Conread position:
               
152-385
               

               
Cow position:
               
chr12:32169472-32169702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
53, 139
               

               
Conread position:
               
152-390
               

               
Cow position:
               
chr12:27563446-27563218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
61, 146
               

               
Conread position:
               
152-395
               

               
Cow position:
               
chr12:37008772-37008544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
152-396
               

               
Cow position:
               
chr12:30805784-30806020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
61, 157
               

               
Conread position:
               
152-396
               

               
Cow position:
               
chr12:30946674-30946913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
60, 170
               

               
Conread position:
               
152-397
               

               
Cow position:
               
chr12:30919356-30919602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
61, 142
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr12:4193759-4194004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
20, 15
               

               
Conread position:
               
152-400
               

               
Cow position:
               
chr12:30590695-30590940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
45, 151
               

               
Conread position:
               
152-404
               

               
Cow position:
               
chr12:25343712-25343959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
57, 169
               

               
Conread position:
               
153-296
               

               
Cow position:
               
chr12:33458081-33458227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
153-297
               

               
Cow position:
               
chr12:25188118-25188268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
153-309
               

               
Cow position:
               
chr12:11836166-11836326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr12:7977972-7978132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 155
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr12:14131836-14131674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 73
               

               
Conread position:
               
153-328
               

               
Cow position:
               
chr12:5609576-5609400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 42
               

               
Conread position:
               
153-340
               

               
Cow position:
               
chr12:7457611-7457423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
56, 166
               

               
Conread position:
               
153-378
               

               
Cow position:
               
chr12:23574695-23574919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
60, 172
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr12:40158090-40157872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
49, 88
               

               
Conread position:
               
153-388
               

               
Cow position:
               
chr12:21393639-21393869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr12:34148429-34148179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
153-390
               

               
Cow position:
               
chr12:19261127-19261356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
56, 132
               

               
Conread position:
               
153-390
               

               
Cow position:
               
chr12:29057321-29057551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
153-393
               

               
Cow position:
               
chr12:41159522-41159745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 165
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr12:7000671-7000418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 93
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr12:34007237-34007467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
43, 62
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr12:36790878-36790645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
60, 15
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr12:3880048-3879784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr12:13988302-13988543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 10
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr12:13643163-13643405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
49, 151
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr12:15163072-15163328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr12:26750021-26749780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
17, 148
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr12:39382537-39382791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
102, 33
               

               
Conread position:
               
153-401
               

               
Cow position:
               
chr12:42698303-42698065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
172, 32
               

               
Conread position:
               
153-404
               

               
Cow position:
               
chr12:11659860-11660102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
154-291
               

               
Cow position:
               
chr12:4135010-4135151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
154-292
               

               
Cow position:
               
chr12:6754129-6754271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
154-323
               

               
Cow position:
               
chr12:7920175-7920347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
59, 166
               

               
Conread position:
               
154-378
               

               
Cow position:
               
chr12:19400882-19400667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
59, 16
               

               
Conread position:
               
154-384
               

               
Cow position:
               
chr12:24181082-24181298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
154-390
               

               
Cow position:
               
chr12:26217892-26217666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
31, 147
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr12:4341811-4341573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
59, 173
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr12:35779992-35779758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 169
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr12:42602310-42602075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
65, 138
               

               
Conread position:
               
154-394
               

               
Cow position:
               
chr12:44622287-44622525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
9, 61
               

               
Conread position:
               
154-395
               

               
Cow position:
               
chr12:36994183-36993927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
154-398
               

               
Cow position:
               
chr12:32051444-32051690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
154-404
               

               
Cow position:
               
chr12:35771088-35770849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
53, 143
               

               
Conread position:
               
155-281
               

               
Cow position:
               
chr12:44905566-44905691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
155-292
               

               
Cow position:
               
chr12:3615936-3616072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
155-376
               

               
Cow position:
               
chr12:16056924-16056708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
58, 168
               

               
Conread position:
               
155-385
               

               
Cow position:
               
chr12:42162980-42163198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 23
               

               
Conread position:
               
155-396
               

               
Cow position:
               
chr12:21780096-21780331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
155-398
               

               
Cow position:
               
chr12:6241253-6241493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
155-398
               

               
Cow position:
               
chr12:8943289-8943046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
58, 17
               

               
Conread position:
               
155-399
               

               
Cow position:
               
chr12:6188180-6187939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
58, 168
               

               
Conread position:
               
155-399
               

               
Cow position:
               
chr12:12300849-12301097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
35, 140
               

               
Conread position:
               
155-402
               

               
Cow position:
               
chr12:4596396-4596646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
41, 174
               

               
Conread position:
               
155-403
               

               
Cow position:
               
chr12:40910355-40910110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
156-378
               

               
Cow position:
               
chr12:10834189-10833983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
156-379
               

               
Cow position:
               
chr12:42879629-42879849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
52, 128
               

               
Conread position:
               
156-391
               

               
Cow position:
               
chr12:10942222-10942456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
57, 169
               

               
Conread position:
               
156-396
               

               
Cow position:
               
chr12:4594436-4594666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
50, 88
               

               
Conread position:
               
157-294
               

               
Cow position:
               
chr12:34161350-34161490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
157-313
               

               
Cow position:
               
chr12:44901197-44901354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
157-398
               

               
Cow position:
               
chr12:17486903-17487148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
53, 150
               

               
Conread position:
               
157-398
               

               
Cow position:
               
chr12:24663050-24663290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
55, 148
               

               
Conread position:
               
160-310
               

               
Cow position:
               
chr12:25320861-25321007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
160-385
               

               
Cow position:
               
chr12:37255959-37256174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
160-391
               

               
Cow position:
               
chr12:9482368-9482140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
24, 121
               

               
Conread position:
               
160-393
               

               
Cow position:
               
chr12:19866178-19866409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
67, 143
               

               
Conread position:
               
160-396
               

               
Cow position:
               
chr12:23764433-23764666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
168, 54
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr12:35310746-35310513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
47, 86
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr12:38155132-38154899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
53, 144
               

               
Conread position:
               
160-399
               

               
Cow position:
               
chr12:7110136-7110378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 169
               

               
Conread position:
               
161-307
               

               
Cow position:
               
chr12:7311320-7311470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
52, 138
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr12:34165525-34165765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
50, 24
               

               
Conread position:
               
161-400
               

               
Cow position:
               
chr12:31883280-31883517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 71
               

               
Conread position:
               
161-400
               

               
Cow position:
               
chr12:34333050-34333287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
52, 131
               

               
Conread position:
               
162-313
               

               
Cow position:
               
chr12:30753661-30753813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
56, 130
               

               
Conread position:
               
163-395
               

               
Cow position:
               
chr12:20479389-20479178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
164-385
               

               
Cow position:
               
chr12:25814090-25814313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
24, 163
               

               
Conread position:
               
166-382
               

               
Cow position:
               
chr12:22485757-22485966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
170-390
               

               
Cow position:
               
chr12:36261638-36261855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
43, 122
               

               
Conread position:
               
170-396
               

               
Cow position:
               
chr12:7884732-7884513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
38, 149
               

               
Conread position:
               
170-398
               

               
Cow position:
               
chr12:31925801-31926024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
42, 151
               

               
Conread position:
               
171-385
               

               
Cow position:
               
chr12:25444864-25445093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
174-309
               

               
Cow position:
               
chr12:22859420-22859555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
174-395
               

               
Cow position:
               
chr12:24437682-24437466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 128
               

               
Conread position:
               
174-395
               

               
Cow position:
               
chr12:43854847-43855056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
39, 125
               

               
Conread position:
               
175-309
               

               
Cow position:
               
chr12:5543839-5543703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
175-395
               

               
Cow position:
               
chr12:23105891-23106105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
38, 139
               

               
Conread position:
               
177-313
               

               
Cow position:
               
chr12:3586074-3586214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
179-378
               

               
Cow position:
               
chr12:6226186-6225973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
40, 68
               

               
Conread position:
               
179-388
               

               
Cow position:
               
chr12:26357411-26357208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
30, 124
               

               
Conread position:
               
180-313
               

               
Cow position:
               
chr12:42143119-42143255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
180-324
               

               
Cow position:
               
chr12:40270103-40269959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
180-380
               

               
Cow position:
               
chr12:44542225-44542414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
33, 118
               

               
Conread position:
               
185-308
               

               
Cow position:
               
chr12:44559816-44559941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 98
               

               
Conread position:
               
185-312
               

               
Cow position:
               
chr12:18996774-18996905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
185-390
               

               
Cow position:
               
chr12:37480871-37480676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 52
               

               
Conread position:
               
185-394
               

               
Cow position:
               
chr12:43619248-43619448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
75, 111
               

               
Conread position:
               
185-398
               

               
Cow position:
               
chr12:39150088-39149880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
28, 136
               

               
Conread position:
               
185-399
               

               
Cow position:
               
chr12:25456372-25456591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
34, 146
               

               
Conread position:
               
186-397
               

               
Cow position:
               
chr12:29200429-29200210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 173
               

               
Conread position:
               
186-398
               

               
Cow position:
               
chr12:22752594-22752801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 110
               

               
Conread position:
               
186-399
               

               
Cow position:
               
chr12:29944983-29944768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
33, 119
               

               
Conread position:
               
186-399
               

               
Cow position:
               
chr12:30476473-30476682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 136
               

               
Conread position:
               
189-397
               

               
Cow position:
               
chr12:9147021-9147229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
190-404
               

               
Cow position:
               
chr12:6958190-6958394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
19, 113
               

               
Conread position:
               
192-301
               

               
Cow position:
               
chr12:6666545-6666654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-396
               

               
Cow position:
               
chr12:20355186-20355390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
21, 100
               

               
Conread position:
               
192-403
               

               
Cow position:
               
chr12:32391893-32392104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
114, 39
               

               
Conread position:
               
196-392
               

               
Cow position:
               
chr12:12699662-12699475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
199-391
               

               
Cow position:
               
chr12:22341228-22341421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
199-399
               

               
Cow position:
               
chr12:34877812-34878008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
86, 76
               

               
Conread position:
               
200-391
               

               
Cow position:
               
chr12:22047903-22048086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 118
               

               
Conread position:
               
200-397
               

               
Cow position:
               
chr12:44013614-44013421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
200-398
               

               
Cow position:
               
chr12:15832176-15832376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
88, 131
               

               
Conread position:
               
200-398
               

               
Cow position:
               
chr12:43551239-43551047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
208-397
               

               
Cow position:
               
chr12:11272835-11272660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
175, 63
               

               
Conread position:
               
209-377
               

               
Cow position:
               
chr12:44861268-44861109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
209-389
               

               
Cow position:
               
chr12:4014441-4014262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
209-392
               

               
Cow position:
               
chr12:22469504-22469685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
94, 118
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr12:22323282-22323098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
210-392
               

               
Cow position:
               
chr12:28598256-28598434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
210-397
               

               
Cow position:
               
chr12:4962627-4962822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
211-398
               

               
Cow position:
               
chr12:11583703-11583891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
94, 152
               

               
Conread position:
               
211-398
               

               
Cow position:
               
chr12:42561896-42562067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
214-398
               

               
Cow position:
               
chr12:14987796-14987969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
219-393
               

               
Cow position:
               
chr12:3160255-3160086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
222-396
               

               
Cow position:
               
chr12:41420861-41420692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
226-399
               

               
Cow position:
               
chr12:13995789-13995624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
226-399
               

               
Cow position:
               
chr12:38002133-38002307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 50
               

               
Conread position:
               
228-378
               

               
Cow position:
               
chr12:12179072-12179212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
229-391
               

               
Cow position:
               
chr12:1848485-1848310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
230-395
               

               
Cow position:
               
chr12:44892220-44892375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
232-391
               

               
Cow position:
               
chr12:11950152-11950319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
250-390
               

               
Cow position:
               
chr12:29289818-29289948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
287-402
               

               
Cow position:
               
chr12:25031495-25031612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
14, 53
               
Show alignments to all cow chromosomes.