Cow genome map
| Conread name: | rplac_3633.y1 |
| Conread position: | 109-396 |
| Cow position: | chr14:28924278-28924002 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 217 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 141-311 |
| Cow position: | chr14:49021814-49021987 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 20, 94 |
| Conread position: | 142-308 |
| Cow position: | chr14:34399715-34399885 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 142-399 |
| Cow position: | chr14:14622095-14622334 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 67, 154 |
| Conread position: | 143-394 |
| Cow position: | chr14:6735781-6736029 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 57, 98 |
| Conread position: | 143-396 |
| Cow position: | chr14:36167017-36166777 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 144-292 |
| Cow position: | chr14:15039533-15039684 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 69, 47 |
| Conread position: | 144-382 |
| Cow position: | chr14:19129587-19129338 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 144-382 |
| Cow position: | chr14:41302748-41302992 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 20, 173 |
| Conread position: | 144-403 |
| Cow position: | chr14:41471887-41472153 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 133 |
| Conread position: | 145-396 |
| Cow position: | chr14:48744592-48744352 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 68, 13 |
| Conread position: | 145-399 |
| Cow position: | chr14:33456963-33457212 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 68, 147 |
| Conread position: | 146-398 |
| Cow position: | chr14:10387739-10387493 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 6, 139 |
| Conread position: | 147-391 |
| Cow position: | chr14:27044693-27044948 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 147-395 |
| Cow position: | chr14:5222214-5222447 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 63, 5 |
| Conread position: | 147-396 |
| Cow position: | chr14:41132577-41132832 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 36, 12 |
| Conread position: | 147-399 |
| Cow position: | chr14:4227142-4227388 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 16, 155 |
| Conread position: | 147-399 |
| Cow position: | chr14:13385445-13385200 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 5 |
| Conread position: | 147-399 |
| Cow position: | chr14:15428556-15428312 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 66, 157 |
| Conread position: | 149-399 |
| Cow position: | chr14:28465144-28465384 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 56 |
| Conread position: | 150-381 |
| Cow position: | chr14:16237437-16237658 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 61, 134 |
| Conread position: | 150-382 |
| Cow position: | chr14:25002111-25001883 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 7, 116 |
| Conread position: | 150-390 |
| Cow position: | chr14:50362869-50362635 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 63, 171 |
| Conread position: | 150-393 |
| Cow position: | chr14:27733675-27733448 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 11 |
| Conread position: | 150-396 |
| Cow position: | chr14:12244308-12244545 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 7, 152 |
| Conread position: | 150-396 |
| Cow position: | chr14:23078716-23078955 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 14, 149 |
| Conread position: | 150-397 |
| Cow position: | chr14:10937754-10937506 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 160 |
| Conread position: | 150-397 |
| Cow position: | chr14:24236900-24236658 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 63, 135 |
| Conread position: | 150-397 |
| Cow position: | chr14:26825266-26825024 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 61, 150 |
| Conread position: | 150-398 |
| Cow position: | chr14:33546280-33546524 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 173 |
| Conread position: | 150-399 |
| Cow position: | chr14:4282434-4282676 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 67, 147 |
| Conread position: | 151-379 |
| Cow position: | chr14:48496073-48496293 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 62, 40 |
| Conread position: | 151-390 |
| Cow position: | chr14:1803039-1803276 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 62, 174 |
| Conread position: | 151-393 |
| Cow position: | chr14:4877156-4877387 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 11, 145 |
| Conread position: | 151-399 |
| Cow position: | chr14:21357630-21357391 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 17, 166 |
| Conread position: | 152-295 |
| Cow position: | chr14:13810007-13809866 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 152-306 |
| Cow position: | chr14:37902066-37901910 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 152-315 |
| Cow position: | chr14:1868311-1868475 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 61, 12 |
| Conread position: | 152-315 |
| Cow position: | chr14:37447394-37447559 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 152-379 |
| Cow position: | chr14:34775673-34775895 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 67, 152 |
| Conread position: | 152-380 |
| Cow position: | chr14:40754174-40754391 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 59, 123 |
| Conread position: | 152-381 |
| Cow position: | chr14:26796710-26796948 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 142 |
| Conread position: | 152-385 |
| Cow position: | chr14:20467003-20466784 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 123, 47 |
| Conread position: | 152-391 |
| Cow position: | chr14:4203025-4203266 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 57, 165 |
| Conread position: | 152-391 |
| Cow position: | chr14:7198571-7198337 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 59, 152 |
| Conread position: | 152-391 |
| Cow position: | chr14:12141832-12142074 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 61, 94 |
| Conread position: | 152-391 |
| Cow position: | chr14:23419871-23419635 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 32, 171 |
| Conread position: | 152-391 |
| Cow position: | chr14:28304709-28304945 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 130 |
| Conread position: | 152-394 |
| Cow position: | chr14:14466390-14466621 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 202, 60 |
| Conread position: | 152-395 |
| Cow position: | chr14:25986589-25986350 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 153 |
| Conread position: | 152-398 |
| Cow position: | chr14:41966317-41966060 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 55, 159 |
| Conread position: | 152-401 |
| Cow position: | chr14:46685371-46685132 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 152-404 |
| Cow position: | chr14:6226552-6226811 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 153-292 |
| Cow position: | chr14:27275233-27275092 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 60, 72 |
| Conread position: | 153-302 |
| Cow position: | chr14:33247357-33247510 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 153-304 |
| Cow position: | chr14:33309432-33309587 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 60, 10 |
| Conread position: | 153-308 |
| Cow position: | chr14:34448899-34449058 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 153-324 |
| Cow position: | chr14:42437095-42436922 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 153-385 |
| Cow position: | chr14:20481771-20482004 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 160 |
| Conread position: | 153-388 |
| Cow position: | chr14:7695339-7695109 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 60, 169 |
| Conread position: | 153-389 |
| Cow position: | chr14:16457589-16457349 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 56, 74 |
| Conread position: | 153-391 |
| Cow position: | chr14:28987770-28987531 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 113, 17 |
| Conread position: | 153-391 |
| Cow position: | chr14:40952330-40952104 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 213, 51 |
| Conread position: | 153-397 |
| Cow position: | chr14:15944598-15944831 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 62 |
| Conread position: | 153-397 |
| Cow position: | chr14:37883844-37884096 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 217 |
| Conread position: | 153-398 |
| Cow position: | chr14:11470079-11470315 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 57, 119 |
| Conread position: | 153-398 |
| Cow position: | chr14:31130305-31130542 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 56, 145 |
| Conread position: | 153-399 |
| Cow position: | chr14:11285648-11285404 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 164, 181 |
| Conread position: | 153-399 |
| Cow position: | chr14:12033169-12033411 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 55, 78 |
| Conread position: | 154-283 |
| Cow position: | chr14:25403864-25403997 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 154-371 |
| Cow position: | chr14:25779168-25778954 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 143, 61 |
| Conread position: | 154-380 |
| Cow position: | chr14:48427142-48426925 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 163 |
| Conread position: | 154-385 |
| Cow position: | chr14:24981527-24981301 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 9, 141 |
| Conread position: | 154-390 |
| Cow position: | chr14:10078339-10078097 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 154-392 |
| Cow position: | chr14:29965090-29964858 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 55, 95 |
| Conread position: | 154-392 |
| Cow position: | chr14:34331255-34331505 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 154-398 |
| Cow position: | chr14:35381662-35381424 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 154-398 |
| Cow position: | chr14:40230569-40230800 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 57, 32 |
| Conread position: | 154-399 |
| Cow position: | chr14:7036286-7036526 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 188 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 55, 167 |
| Conread position: | 155-308 |
| Cow position: | chr14:12954315-12954469 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 121 |
| Conread position: | 155-311 |
| Cow position: | chr14:8101860-8101703 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 155-390 |
| Cow position: | chr14:26655064-26655294 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 64, 166 |
| Conread position: | 155-391 |
| Cow position: | chr14:16749615-16749850 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 58, 152 |
| Conread position: | 155-398 |
| Cow position: | chr14:20016637-20016875 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 56, 166 |
| Conread position: | 155-399 |
| Cow position: | chr14:2975023-2975252 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 155-399 |
| Cow position: | chr14:4848417-4848184 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 47, 166 |
| Conread position: | 155-399 |
| Cow position: | chr14:8923514-8923753 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 56, 143 |
| Conread position: | 155-399 |
| Cow position: | chr14:19206943-19206698 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 173 |
| Conread position: | 155-402 |
| Cow position: | chr14:34199773-34200028 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 156-313 |
| Cow position: | chr14:30431499-30431660 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 156-385 |
| Cow position: | chr14:36709189-36708948 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 156-398 |
| Cow position: | chr14:50146948-50146686 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 57, 87 |
| Conread position: | 160-312 |
| Cow position: | chr14:3943485-3943641 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 160-391 |
| Cow position: | chr14:18941221-18941446 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 53, 86 |
| Conread position: | 160-392 |
| Cow position: | chr14:42330420-42330187 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 38, 126 |
| Conread position: | 160-393 |
| Cow position: | chr14:18763373-18763624 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 53, 88 |
| Conread position: | 160-394 |
| Cow position: | chr14:18302026-18301795 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 52, 168 |
| Conread position: | 160-396 |
| Cow position: | chr14:6541659-6541890 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 53, 146 |
| Conread position: | 160-398 |
| Cow position: | chr14:38921017-38920792 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 160-399 |
| Cow position: | chr14:34983935-34983682 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 193 |
| Conread position: | 160-400 |
| Cow position: | chr14:5958922-5959160 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 53, 138 |
| Conread position: | 160-400 |
| Cow position: | chr14:45052508-45052270 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 163 |
| Conread position: | 161-394 |
| Cow position: | chr14:38285906-38286146 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 52, 20 |
| Conread position: | 161-398 |
| Cow position: | chr14:22997513-22997762 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 50, 114 |
| Conread position: | 161-399 |
| Cow position: | chr14:38144043-38144276 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 52, 139 |
| Conread position: | 162-289 |
| Cow position: | chr14:25399134-25399001 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 162-389 |
| Cow position: | chr14:1708593-1708815 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 51, 138 |
| Conread position: | 162-393 |
| Cow position: | chr14:22941665-22941900 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 164-382 |
| Cow position: | chr14:19594076-19594284 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 49, 134 |
| Conread position: | 164-391 |
| Cow position: | chr14:27330803-27330574 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 109 |
| Conread position: | 166-378 |
| Cow position: | chr14:18350798-18351012 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 46, 144 |
| Conread position: | 169-293 |
| Cow position: | chr14:47511014-47510889 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 170-395 |
| Cow position: | chr14:15469927-15470148 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 117 |
| Conread position: | 170-397 |
| Cow position: | chr14:45955336-45955123 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 199, 44 |
| Conread position: | 172-292 |
| Cow position: | chr14:21406657-21406781 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 172-399 |
| Cow position: | chr14:27364631-27364411 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 10, 130 |
| Conread position: | 173-397 |
| Cow position: | chr14:44713471-44713251 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 38, 148 |
| Conread position: | 181-311 |
| Cow position: | chr14:42276667-42276536 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 184-398 |
| Cow position: | chr14:18412550-18412759 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 21, 137 |
| Conread position: | 185-379 |
| Cow position: | chr14:38673881-38674076 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 28, 8 |
| Conread position: | 185-395 |
| Cow position: | chr14:50519141-50519339 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 130 |
| Conread position: | 185-397 |
| Cow position: | chr14:13515952-13516157 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 26, 46 |
| Conread position: | 185-399 |
| Cow position: | chr14:8083239-8083029 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 14, 106 |
| Conread position: | 185-399 |
| Cow position: | chr14:37436670-37436888 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 168 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 28, 145 |
| Conread position: | 186-313 |
| Cow position: | chr14:42153369-42153496 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 96 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-324 |
| Cow position: | chr14:25611519-25611379 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 106, 5 |
| Conread position: | 186-390 |
| Cow position: | chr14:39422843-39423052 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 186-397 |
| Cow position: | chr14:35421045-35421252 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 187-382 |
| Cow position: | chr14:25073163-25072956 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 26, 98 |
| Conread position: | 190-312 |
| Cow position: | chr14:24785693-24785567 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 190-398 |
| Cow position: | chr14:18270396-18270195 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 23, 129 |
| Conread position: | 191-403 |
| Cow position: | chr14:46490432-46490638 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 18, 112 |
| Conread position: | 192-395 |
| Cow position: | chr14:7271221-7271420 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 89 |
| Conread position: | 199-390 |
| Cow position: | chr14:30260790-30260593 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 199-396 |
| Cow position: | chr14:10920541-10920731 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 199-398 |
| Cow position: | chr14:15518374-15518568 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 23, 105 |
| Conread position: | 199-399 |
| Cow position: | chr14:3923930-3923732 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 166, 114 |
| Conread position: | 200-315 |
| Cow position: | chr14:16761589-16761706 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 200-389 |
| Cow position: | chr14:33758391-33758190 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 200-390 |
| Cow position: | chr14:8027539-8027725 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 181, 88 |
| Conread position: | 200-393 |
| Cow position: | chr14:44152955-44153148 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 125, 110 |
| Conread position: | 200-395 |
| Cow position: | chr14:23465024-23465214 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 92 |
| Conread position: | 201-404 |
| Cow position: | chr14:25290835-25290637 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 202-396 |
| Cow position: | chr14:39041389-39041193 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 33, 111 |
| Conread position: | 204-391 |
| Cow position: | chr14:21122400-21122210 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 56, 118 |
| Conread position: | 206-378 |
| Cow position: | chr14:20513245-20513082 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 209-379 |
| Cow position: | chr14:19772264-19772420 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 209-382 |
| Cow position: | chr14:21964149-21963971 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 116, 155 |
| Conread position: | 209-383 |
| Cow position: | chr14:20035734-20035568 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 209-391 |
| Cow position: | chr14:20914965-20915139 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 59, 94 |
| Conread position: | 209-393 |
| Cow position: | chr14:47224354-47224532 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 209-394 |
| Cow position: | chr14:18306216-18306031 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 169, 118 |
| Conread position: | 209-394 |
| Cow position: | chr14:20483686-20483866 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 209-402 |
| Cow position: | chr14:32784103-32784287 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 211-395 |
| Cow position: | chr14:31342222-31342047 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 214-394 |
| Cow position: | chr14:48762395-48762207 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 78, 9 |
| Conread position: | 215-393 |
| Cow position: | chr14:24746473-24746296 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 79 |
| Conread position: | 215-403 |
| Cow position: | chr14:36151331-36151154 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 218-398 |
| Cow position: | chr14:37504518-37504347 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 219-395 |
| Cow position: | chr14:47200122-47200296 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 231-399 |
| Cow position: | chr14:16593372-16593214 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 238-385 |
| Cow position: | chr14:37109788-37109944 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
Show alignments to all cow chromosomes.