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Cow genome map

           
Conread name:
           
rplac_3633.y1
        

               
Conread position:
               
77-399
               

               
Cow position:
               
chr18:27388443-27388769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
7, 61
               

               
Conread position:
               
105-397
               

               
Cow position:
               
chr18:24342733-24343036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
58, 28
               

               
Conread position:
               
135-399
               

               
Cow position:
               
chr18:23941703-23941441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
63, 6
               

               
Conread position:
               
136-385
               

               
Cow position:
               
chr18:35889175-35888927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
157, 84
               

               
Conread position:
               
142-398
               

               
Cow position:
               
chr18:7965159-7965406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
143-292
               

               
Cow position:
               
chr18:52854982-52855135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
143-381
               

               
Cow position:
               
chr18:55499000-55499227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
143-394
               

               
Cow position:
               
chr18:45104514-45104257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
70, 188
               

               
Conread position:
               
143-399
               

               
Cow position:
               
chr18:31557233-31556982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
66, 161
               

               
Conread position:
               
144-376
               

               
Cow position:
               
chr18:35874009-35874230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
65, 8
               

               
Conread position:
               
144-384
               

               
Cow position:
               
chr18:10656366-10656615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
67, 219
               

               
Conread position:
               
144-389
               

               
Cow position:
               
chr18:5647742-5647973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 8
               

               
Conread position:
               
144-399
               

               
Cow position:
               
chr18:37023622-37023361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 187
               

               
Conread position:
               
145-378
               

               
Cow position:
               
chr18:26998813-26999043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 32
               

               
Conread position:
               
146-389
               

               
Cow position:
               
chr18:33007992-33008249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 99
               

               
Conread position:
               
148-313
               

               
Cow position:
               
chr18:11754065-11754231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
63, 25
               

               
Conread position:
               
148-313
               

               
Cow position:
               
chr18:47920672-47920847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
149-292
               

               
Cow position:
               
chr18:7359679-7359825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
149-301
               

               
Cow position:
               
chr18:30586288-30586136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
149-393
               

               
Cow position:
               
chr18:42479653-42479411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 158
               

               
Conread position:
               
149-403
               

               
Cow position:
               
chr18:51405971-51405738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
58, 22
               

               
Conread position:
               
150-312
               

               
Cow position:
               
chr18:21266440-21266608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
150-391
               

               
Cow position:
               
chr18:53642814-53642582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
59, 97
               

               
Conread position:
               
150-393
               

               
Cow position:
               
chr18:6130118-6129866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 17
               

               
Conread position:
               
150-393
               

               
Cow position:
               
chr18:35692790-35693044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
63, 125
               

               
Conread position:
               
150-394
               

               
Cow position:
               
chr18:43283822-43283586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
150-398
               

               
Cow position:
               
chr18:3044385-3044631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
125, 9
               

               
Conread position:
               
150-399
               

               
Cow position:
               
chr18:47416936-47417175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
61, 101
               

               
Conread position:
               
150-403
               

               
Cow position:
               
chr18:7956079-7956328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
8, 152
               

               
Conread position:
               
151-323
               

               
Cow position:
               
chr18:22214423-22214599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
152-291
               

               
Cow position:
               
chr18:52635134-52634991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
152-292
               

               
Cow position:
               
chr18:51691526-51691382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
152-292
               

               
Cow position:
               
chr18:56172074-56171934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-295
               

               
Cow position:
               
chr18:47525342-47525491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
152-295
               

               
Cow position:
               
chr18:56301829-56301975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
152-307
               

               
Cow position:
               
chr18:51656106-51655948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
152-312
               

               
Cow position:
               
chr18:47966987-47966826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
138, 156
               

               
Conread position:
               
152-313
               

               
Cow position:
               
chr18:4872008-4872164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
152-313
               

               
Cow position:
               
chr18:56191025-56190860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
152-317
               

               
Cow position:
               
chr18:51392703-51392538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
152-319
               

               
Cow position:
               
chr18:19273160-19272989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
152-389
               

               
Cow position:
               
chr18:34219987-34219741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
57, 162
               

               
Conread position:
               
152-391
               

               
Cow position:
               
chr18:23162829-23163061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
152-391
               

               
Cow position:
               
chr18:29371803-29372037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
61, 169
               

               
Conread position:
               
152-391
               

               
Cow position:
               
chr18:56155456-56155683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 99
               

               
Conread position:
               
152-392
               

               
Cow position:
               
chr18:247753-247528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
21, 63
               

               
Conread position:
               
152-392
               

               
Cow position:
               
chr18:16659497-16659260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 147
               

               
Conread position:
               
152-394
               

               
Cow position:
               
chr18:39875322-39875075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
152-395
               

               
Cow position:
               
chr18:2592229-2591989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
20, 162
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr18:5701185-5701438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr18:6005564-6005327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
50, 135
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr18:19765125-19765360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
59, 148
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr18:4668562-4668331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
58, 82
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr18:11691472-11691231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
56, 83
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr18:27078804-27079042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
153-300
               

               
Cow position:
               
chr18:51850620-51850475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
136, 24
               

               
Conread position:
               
153-304
               

               
Cow position:
               
chr18:22170555-22170710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
153-312
               

               
Cow position:
               
chr18:48961871-48962036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
153-379
               

               
Cow position:
               
chr18:24266470-24266248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
59, 152
               

               
Conread position:
               
153-381
               

               
Cow position:
               
chr18:6399695-6399465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
143, 187
               

               
Conread position:
               
153-386
               

               
Cow position:
               
chr18:12273595-12273816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
56, 147
               

               
Conread position:
               
153-389
               

               
Cow position:
               
chr18:52649410-52649174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 131
               

               
Conread position:
               
153-390
               

               
Cow position:
               
chr18:17391056-17390824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
55, 83
               

               
Conread position:
               
153-392
               

               
Cow position:
               
chr18:55747624-55747856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
153-395
               

               
Cow position:
               
chr18:11867274-11867509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
60, 153
               

               
Conread position:
               
153-395
               

               
Cow position:
               
chr18:24508299-24508062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
42, 177
               

               
Conread position:
               
153-396
               

               
Cow position:
               
chr18:39662716-39662953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
57, 117
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr18:50382190-50382423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr18:46276364-46276125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr18:50959423-50959664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
48, 108
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr18:53038767-53039024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
153-402
               

               
Cow position:
               
chr18:46072400-46072650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
60, 147
               

               
Conread position:
               
154-307
               

               
Cow position:
               
chr18:24719251-24719408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
154-374
               

               
Cow position:
               
chr18:39001865-39001664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
154-376
               

               
Cow position:
               
chr18:37382150-37381939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
154-382
               

               
Cow position:
               
chr18:5766351-5766567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
223, 114
               

               
Conread position:
               
154-396
               

               
Cow position:
               
chr18:22055936-22055688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
54, 176
               

               
Conread position:
               
154-397
               

               
Cow position:
               
chr18:3211816-3212054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 152
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr18:3180349-3180585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 146
               

               
Conread position:
               
154-403
               

               
Cow position:
               
chr18:39623738-39623983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
59, 144
               

               
Conread position:
               
155-314
               

               
Cow position:
               
chr18:56044496-56044656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
155-368
               

               
Cow position:
               
chr18:4673247-4673467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
155-385
               

               
Cow position:
               
chr18:33158882-33159104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 20
               

               
Conread position:
               
155-388
               

               
Cow position:
               
chr18:49015068-49015280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
155-389
               

               
Cow position:
               
chr18:40759146-40759386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
58, 117
               

               
Conread position:
               
155-389
               

               
Cow position:
               
chr18:42427559-42427781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
58, 143
               

               
Conread position:
               
155-391
               

               
Cow position:
               
chr18:53053294-53053062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
64, 5
               

               
Conread position:
               
155-395
               

               
Cow position:
               
chr18:43555585-43555342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
55, 151
               

               
Conread position:
               
155-397
               

               
Cow position:
               
chr18:51757033-51757267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
54, 97
               

               
Conread position:
               
156-307
               

               
Cow position:
               
chr18:56159402-56159556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 96
               

               
Conread position:
               
156-378
               

               
Cow position:
               
chr18:48113024-48112812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
20, 46
               

               
Conread position:
               
156-383
               

               
Cow position:
               
chr18:19896511-19896265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
156-385
               

               
Cow position:
               
chr18:3158656-3158422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
31, 18
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr18:12270442-12270678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
57, 175
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr18:23447121-23446894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
55, 149
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr18:45903954-45903730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
57, 160
               

               
Conread position:
               
156-391
               

               
Cow position:
               
chr18:32599992-32600221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 136
               

               
Conread position:
               
156-397
               

               
Cow position:
               
chr18:52251917-52251681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
156-399
               

               
Cow position:
               
chr18:54572352-54572113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 25
               

               
Conread position:
               
156-404
               

               
Cow position:
               
chr18:4495946-4495710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
57, 146
               

               
Conread position:
               
157-290
               

               
Cow position:
               
chr18:11377306-11377442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 79
               

               
Conread position:
               
157-390
               

               
Cow position:
               
chr18:4556225-4555998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
56, 133
               

               
Conread position:
               
157-396
               

               
Cow position:
               
chr18:1954648-1954408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
30, 174
               

               
Conread position:
               
157-396
               

               
Cow position:
               
chr18:2619272-2619034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 202
               

               
Conread position:
               
160-307
               

               
Cow position:
               
chr18:51192796-51192645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
160-390
               

               
Cow position:
               
chr18:50974350-50974122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
53, 155
               

               
Conread position:
               
160-391
               

               
Cow position:
               
chr18:16545518-16545295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
50, 159
               

               
Conread position:
               
160-391
               

               
Cow position:
               
chr18:23653179-23652946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
47, 168
               

               
Conread position:
               
160-394
               

               
Cow position:
               
chr18:30341236-30341012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
160-397
               

               
Cow position:
               
chr18:46880225-46879987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
38, 168
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr18:2773448-2773213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 164
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr18:2776951-2776716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
49, 164
               

               
Conread position:
               
160-399
               

               
Cow position:
               
chr18:11233360-11233596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
51, 101
               

               
Conread position:
               
160-399
               

               
Cow position:
               
chr18:18369415-18369173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
49, 110
               

               
Conread position:
               
161-292
               

               
Cow position:
               
chr18:10322751-10322886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
161-309
               

               
Cow position:
               
chr18:4203983-4203833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr18:42747537-42747752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
162-370
               

               
Cow position:
               
chr18:52245140-52245368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
162-382
               

               
Cow position:
               
chr18:26586658-26586454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
162-391
               

               
Cow position:
               
chr18:38211107-38211326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
162-395
               

               
Cow position:
               
chr18:4851531-4851314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
162-402
               

               
Cow position:
               
chr18:6075449-6075212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
51, 164
               

               
Conread position:
               
163-313
               

               
Cow position:
               
chr18:21768566-21768716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
32, 42
               

               
Conread position:
               
164-395
               

               
Cow position:
               
chr18:11657603-11657830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
164-398
               

               
Cow position:
               
chr18:25757363-25757140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
167-304
               

               
Cow position:
               
chr18:47410494-47410635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
167-388
               

               
Cow position:
               
chr18:19796972-19796752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 158
               

               
Conread position:
               
168-393
               

               
Cow position:
               
chr18:56011423-56011209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
169-292
               

               
Cow position:
               
chr18:39168485-39168611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
170-385
               

               
Cow position:
               
chr18:47485998-47486208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 114
               

               
Conread position:
               
170-396
               

               
Cow position:
               
chr18:30360197-30359971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
11, 135
               

               
Conread position:
               
170-398
               

               
Cow position:
               
chr18:43950780-43951002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 107
               

               
Conread position:
               
170-398
               

               
Cow position:
               
chr18:45898846-45899069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 149
               

               
Conread position:
               
171-398
               

               
Cow position:
               
chr18:21969848-21969627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
38, 125
               

               
Conread position:
               
171-402
               

               
Cow position:
               
chr18:39097618-39097393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
27, 83
               

               
Conread position:
               
171-403
               

               
Cow position:
               
chr18:47963580-47963819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
42, 163
               

               
Conread position:
               
174-391
               

               
Cow position:
               
chr18:2108207-2108415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
35, 108
               

               
Conread position:
               
174-394
               

               
Cow position:
               
chr18:38523626-38523823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
174-397
               

               
Cow position:
               
chr18:23648880-23649099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
39, 131
               

               
Conread position:
               
174-398
               

               
Cow position:
               
chr18:41553404-41553191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
175-382
               

               
Cow position:
               
chr18:4467027-4466809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
175-385
               

               
Cow position:
               
chr18:23821870-23821668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
175-393
               

               
Cow position:
               
chr18:11672002-11672222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
34, 62
               

               
Conread position:
               
175-399
               

               
Cow position:
               
chr18:50566860-50567079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
36, 147
               

               
Conread position:
               
175-399
               

               
Cow position:
               
chr18:51178769-51178538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
180-399
               

               
Cow position:
               
chr18:30295658-30295434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
29, 16
               

               
Conread position:
               
182-390
               

               
Cow position:
               
chr18:31159307-31159106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
31, 121
               

               
Conread position:
               
183-395
               

               
Cow position:
               
chr18:49040648-49040435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 7
               

               
Conread position:
               
183-403
               

               
Cow position:
               
chr18:49603074-49602863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
27, 134
               

               
Conread position:
               
184-397
               

               
Cow position:
               
chr18:52382872-52383081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
27, 137
               

               
Conread position:
               
184-403
               

               
Cow position:
               
chr18:20998448-20998231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
27, 122
               

               
Conread position:
               
185-389
               

               
Cow position:
               
chr18:18664404-18664200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
28, 120
               

               
Conread position:
               
185-391
               

               
Cow position:
               
chr18:41702806-41703001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
185-398
               

               
Cow position:
               
chr18:46277315-46277108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
185-398
               

               
Cow position:
               
chr18:56463757-56463554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
185-399
               

               
Cow position:
               
chr18:26937740-26937954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 9
               

               
Conread position:
               
185-404
               

               
Cow position:
               
chr18:8208456-8208243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
24, 113
               

               
Conread position:
               
186-324
               

               
Cow position:
               
chr18:49982700-49982842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
186-390
               

               
Cow position:
               
chr18:35795252-35795054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
24, 98
               

               
Conread position:
               
186-403
               

               
Cow position:
               
chr18:21751349-21751560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 111
               

               
Conread position:
               
187-398
               

               
Cow position:
               
chr18:45185843-45186050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
26, 132
               

               
Conread position:
               
190-379
               

               
Cow position:
               
chr18:3098058-3097870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
191-381
               

               
Cow position:
               
chr18:697242-697062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
192-394
               

               
Cow position:
               
chr18:19962167-19961966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 116
               

               
Conread position:
               
192-396
               

               
Cow position:
               
chr18:18320580-18320376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
101, 137
               

               
Conread position:
               
192-398
               

               
Cow position:
               
chr18:49161327-49161126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
17, 83
               

               
Conread position:
               
192-399
               

               
Cow position:
               
chr18:641343-641140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 50
               

               
Conread position:
               
193-390
               

               
Cow position:
               
chr18:29188366-29188562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
7, 131
               

               
Conread position:
               
193-399
               

               
Cow position:
               
chr18:39267504-39267292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
194-314
               

               
Cow position:
               
chr18:52625482-52625359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
194-385
               

               
Cow position:
               
chr18:50612550-50612355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
17, 5
               

               
Conread position:
               
194-398
               

               
Cow position:
               
chr18:39860791-39860604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
15, 41
               

               
Conread position:
               
194-399
               

               
Cow position:
               
chr18:10861113-10860915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
15, 39
               

               
Conread position:
               
198-390
               

               
Cow position:
               
chr18:5189709-5189525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
11, 121
               

               
Conread position:
               
199-398
               

               
Cow position:
               
chr18:42978659-42978458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
199-401
               

               
Cow position:
               
chr18:49281076-49280885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
184, 118
               

               
Conread position:
               
200-385
               

               
Cow position:
               
chr18:33606950-33607153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
200-391
               

               
Cow position:
               
chr18:52387232-52387051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
200-392
               

               
Cow position:
               
chr18:4000334-4000518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
48, 52
               

               
Conread position:
               
200-403
               

               
Cow position:
               
chr18:1581910-1581705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
133, 31
               

               
Conread position:
               
201-374
               

               
Cow position:
               
chr18:19701667-19701834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
202-390
               

               
Cow position:
               
chr18:22045423-22045245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
206-394
               

               
Cow position:
               
chr18:40028209-40028394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
56, 117
               

               
Conread position:
               
209-392
               

               
Cow position:
               
chr18:4489911-4489732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
170, 113
               

               
Conread position:
               
209-396
               

               
Cow position:
               
chr18:35857927-35857752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
74, 62
               

               
Conread position:
               
209-397
               

               
Cow position:
               
chr18:16381855-16382034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr18:21878460-21878281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
209-398
               

               
Cow position:
               
chr18:35950032-35950219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
41, 115
               

               
Conread position:
               
209-400
               

               
Cow position:
               
chr18:44773928-44774111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr18:31724892-31724695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
209-403
               

               
Cow position:
               
chr18:39866014-39865822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
88, 80
               

               
Conread position:
               
210-398
               

               
Cow position:
               
chr18:47175383-47175204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
58, 34
               

               
Conread position:
               
210-399
               

               
Cow position:
               
chr18:29402186-29402378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
112, 91
               

               
Conread position:
               
211-403
               

               
Cow position:
               
chr18:23921703-23921515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
212-403
               

               
Cow position:
               
chr18:44044343-44044160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
59, 35
               

               
Conread position:
               
214-398
               

               
Cow position:
               
chr18:1549547-1549366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
215-391
               

               
Cow position:
               
chr18:44514089-44514257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
216-391
               

               
Cow position:
               
chr18:15351726-15351561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
217-394
               

               
Cow position:
               
chr18:2576695-2576523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
218-404
               

               
Cow position:
               
chr18:35454663-35454474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
48, 147
               

               
Conread position:
               
225-393
               

               
Cow position:
               
chr18:30921231-30921401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
70, 126
               

               
Conread position:
               
228-398
               

               
Cow position:
               
chr18:8390206-8390385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
229-382
               

               
Cow position:
               
chr18:19882160-19881999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
251-395
               

               
Cow position:
               
chr18:21608812-21608667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
17, 30
               

               
Conread position:
               
300-399
               

               
Cow position:
               
chr18:39190392-39190294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
100
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
27, 0
               
Show alignments to all cow chromosomes.