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Cow genome map

           
Conread name:
           
rplac_3633.y1
        

               
Conread position:
               
135-398
               

               
Cow position:
               
chr22:27275412-27275669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
78, 51
               

               
Conread position:
               
141-395
               

               
Cow position:
               
chr22:5712540-5712785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
142-294
               

               
Cow position:
               
chr22:17184730-17184573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
142-385
               

               
Cow position:
               
chr22:27047449-27047205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
148, 18
               

               
Conread position:
               
142-393
               

               
Cow position:
               
chr22:43237452-43237202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 177
               

               
Conread position:
               
142-399
               

               
Cow position:
               
chr22:12315766-12316012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
13, 105
               

               
Conread position:
               
142-399
               

               
Cow position:
               
chr22:12573167-12573410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 49
               

               
Conread position:
               
142-403
               

               
Cow position:
               
chr22:34616262-34616524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
71, 162
               

               
Conread position:
               
143-294
               

               
Cow position:
               
chr22:10632874-10633026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 15
               

               
Conread position:
               
143-295
               

               
Cow position:
               
chr22:1911622-1911778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
143-403
               

               
Cow position:
               
chr22:10339158-10338898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 242
               

               
Conread position:
               
144-309
               

               
Cow position:
               
chr22:13720062-13719905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
144-378
               

               
Cow position:
               
chr22:9597619-9597401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
144-391
               

               
Cow position:
               
chr22:38977802-38978039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
63, 7
               

               
Conread position:
               
144-398
               

               
Cow position:
               
chr22:5837229-5837465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
69, 8
               

               
Conread position:
               
144-404
               

               
Cow position:
               
chr22:4157128-4156870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
58, 135
               

               
Conread position:
               
145-292
               

               
Cow position:
               
chr22:12749943-12749791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
146-394
               

               
Cow position:
               
chr22:24134363-24134123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
67, 171
               

               
Conread position:
               
147-395
               

               
Cow position:
               
chr22:27944039-27944296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
66, 150
               

               
Conread position:
               
148-292
               

               
Cow position:
               
chr22:7074348-7074489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
149-292
               

               
Cow position:
               
chr22:2523925-2524073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
149-335
               

               
Cow position:
               
chr22:24175927-24175746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
13, 54
               

               
Conread position:
               
149-391
               

               
Cow position:
               
chr22:5595846-5595611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
70, 46
               

               
Conread position:
               
149-393
               

               
Cow position:
               
chr22:38439194-38438959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
60, 136
               

               
Conread position:
               
149-395
               

               
Cow position:
               
chr22:8302582-8302325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
6, 92
               

               
Conread position:
               
149-397
               

               
Cow position:
               
chr22:7362014-7361772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
64, 103
               

               
Conread position:
               
149-397
               

               
Cow position:
               
chr22:10285933-10286192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
149-399
               

               
Cow position:
               
chr22:32698727-32698970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
234, 168
               

               
Conread position:
               
150-309
               

               
Cow position:
               
chr22:877478-877642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
150-312
               

               
Cow position:
               
chr22:2627540-2627711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
150-378
               

               
Cow position:
               
chr22:10631350-10631572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
58, 150
               

               
Conread position:
               
150-379
               

               
Cow position:
               
chr22:12389062-12389287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
13, 136
               

               
Conread position:
               
150-380
               

               
Cow position:
               
chr22:23181078-23180860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 113
               

               
Conread position:
               
150-387
               

               
Cow position:
               
chr22:2076045-2075810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
13, 138
               

               
Conread position:
               
150-390
               

               
Cow position:
               
chr22:7497147-7496911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 155
               

               
Conread position:
               
150-392
               

               
Cow position:
               
chr22:3842583-3842815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 175
               

               
Conread position:
               
150-392
               

               
Cow position:
               
chr22:23736048-23735814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
63, 147
               

               
Conread position:
               
150-394
               

               
Cow position:
               
chr22:3470250-3470490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
9, 172
               

               
Conread position:
               
150-395
               

               
Cow position:
               
chr22:31870286-31870054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
150-396
               

               
Cow position:
               
chr22:4060984-4060746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 22
               

               
Conread position:
               
150-397
               

               
Cow position:
               
chr22:29642078-29642316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
233, 80
               

               
Conread position:
               
150-398
               

               
Cow position:
               
chr22:43131595-43131350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
6, 151
               

               
Conread position:
               
150-399
               

               
Cow position:
               
chr22:12188516-12188269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
150-399
               

               
Cow position:
               
chr22:12195603-12195355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
150-399
               

               
Cow position:
               
chr22:47555815-47556066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
48, 170
               

               
Conread position:
               
151-380
               

               
Cow position:
               
chr22:44180558-44180799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
151-396
               

               
Cow position:
               
chr22:27577708-27577947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
64, 148
               

               
Conread position:
               
151-398
               

               
Cow position:
               
chr22:3430154-3430399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
48, 115
               

               
Conread position:
               
151-398
               

               
Cow position:
               
chr22:15915076-15914842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
151-403
               

               
Cow position:
               
chr22:4075922-4075674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
58, 148
               

               
Conread position:
               
152-292
               

               
Cow position:
               
chr22:45506042-45505895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
152-295
               

               
Cow position:
               
chr22:28672111-28672258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
152-315
               

               
Cow position:
               
chr22:23750928-23750765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
69, 159
               

               
Conread position:
               
152-377
               

               
Cow position:
               
chr22:32514257-32514479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 171
               

               
Conread position:
               
152-378
               

               
Cow position:
               
chr22:40120910-40120689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
66, 99
               

               
Conread position:
               
152-380
               

               
Cow position:
               
chr22:26803784-26804008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
60, 171
               

               
Conread position:
               
152-391
               

               
Cow position:
               
chr22:32326764-32326996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
11, 147
               

               
Conread position:
               
152-391
               

               
Cow position:
               
chr22:35215514-35215748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
152-393
               

               
Cow position:
               
chr22:8539852-8540074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
11, 63
               

               
Conread position:
               
152-397
               

               
Cow position:
               
chr22:6754301-6754060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
57, 149
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr22:7164929-7165172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
61, 8
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr22:9372487-9372730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 171
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr22:15490619-15490859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
47, 149
               

               
Conread position:
               
152-398
               

               
Cow position:
               
chr22:39602248-39602490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 169
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr22:14178861-14178627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
58, 148
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr22:26074886-26075154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
152-399
               

               
Cow position:
               
chr22:39446258-39446499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
59, 40
               

               
Conread position:
               
153-295
               

               
Cow position:
               
chr22:14509511-14509364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
153-295
               

               
Cow position:
               
chr22:27740859-27741004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
153-305
               

               
Cow position:
               
chr22:30269379-30269532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
60, 78
               

               
Conread position:
               
153-307
               

               
Cow position:
               
chr22:534466-534624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr22:1977716-1977880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr22:3965153-3965317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr22:15025143-15024979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
60, 155
               

               
Conread position:
               
153-313
               

               
Cow position:
               
chr22:32188887-32188723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
153-321
               

               
Cow position:
               
chr22:17814199-17814370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
9, 156
               

               
Conread position:
               
153-324
               

               
Cow position:
               
chr22:2502793-2502968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
153-373
               

               
Cow position:
               
chr22:45513552-45513345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 7
               

               
Conread position:
               
153-382
               

               
Cow position:
               
chr22:1563283-1563052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
153-385
               

               
Cow position:
               
chr22:10420999-10421244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
153-391
               

               
Cow position:
               
chr22:21567964-21568188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
61, 98
               

               
Conread position:
               
153-392
               

               
Cow position:
               
chr22:26316437-26316670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
143, 43
               

               
Conread position:
               
153-393
               

               
Cow position:
               
chr22:14647050-14647300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 122
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr22:12157877-12157649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
55, 137
               

               
Conread position:
               
153-394
               

               
Cow position:
               
chr22:37029637-37029405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
153-396
               

               
Cow position:
               
chr22:6852618-6852379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
10, 175
               

               
Conread position:
               
153-397
               

               
Cow position:
               
chr22:37201816-37202051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
60, 122
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr22:1983814-1984062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
7, 175
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr22:14372146-14372371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr22:16823070-16823321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
153-398
               

               
Cow position:
               
chr22:34750642-34750892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
60, 82
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr22:8287154-8287385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr22:16621143-16621397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 183
               

               
Conread position:
               
153-399
               

               
Cow position:
               
chr22:41853872-41854107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
60, 149
               

               
Conread position:
               
153-403
               

               
Cow position:
               
chr22:16235538-16235292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 138
               

               
Conread position:
               
154-292
               

               
Cow position:
               
chr22:23398436-23398294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
154-312
               

               
Cow position:
               
chr22:23176473-23176312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
154-319
               

               
Cow position:
               
chr22:28704152-28704323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
154-379
               

               
Cow position:
               
chr22:17198106-17198323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
154-385
               

               
Cow position:
               
chr22:13878148-13878393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
9, 39
               

               
Conread position:
               
154-385
               

               
Cow position:
               
chr22:32480512-32480276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
59, 153
               

               
Conread position:
               
154-389
               

               
Cow position:
               
chr22:41829272-41829040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
59, 80
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr22:3251026-3250783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
54, 138
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr22:11601003-11601232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
68, 146
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr22:23372896-23372662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
59, 132
               

               
Conread position:
               
154-391
               

               
Cow position:
               
chr22:33448112-33447881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
57, 32
               

               
Conread position:
               
154-394
               

               
Cow position:
               
chr22:20846821-20847076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
154-396
               

               
Cow position:
               
chr22:530601-530376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
154-396
               

               
Cow position:
               
chr22:27274731-27274487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 172
               

               
Conread position:
               
154-397
               

               
Cow position:
               
chr22:16044448-16044196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
154-398
               

               
Cow position:
               
chr22:40349312-40349545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr22:4156849-4156611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
59, 146
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr22:6176317-6176077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr22:6721110-6720876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
59, 141
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr22:13286423-13286653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
154-399
               

               
Cow position:
               
chr22:28071527-28071763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
58, 92
               

               
Conread position:
               
154-400
               

               
Cow position:
               
chr22:28665251-28665510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
154-403
               

               
Cow position:
               
chr22:1106035-1106279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
51, 146
               

               
Conread position:
               
154-403
               

               
Cow position:
               
chr22:2643078-2643322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
95, 83
               

               
Conread position:
               
155-291
               

               
Cow position:
               
chr22:25943444-25943584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
155-292
               

               
Cow position:
               
chr22:23122037-23121892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
155-303
               

               
Cow position:
               
chr22:35029238-35029389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
53, 91
               

               
Conread position:
               
155-320
               

               
Cow position:
               
chr22:10553716-10553547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
155-367
               

               
Cow position:
               
chr22:17119787-17119987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
155-376
               

               
Cow position:
               
chr22:28058082-28057860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
26, 175
               

               
Conread position:
               
155-381
               

               
Cow position:
               
chr22:30515224-30515455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 179
               

               
Conread position:
               
155-382
               

               
Cow position:
               
chr22:1849043-1849263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
42, 143
               

               
Conread position:
               
155-382
               

               
Cow position:
               
chr22:44384525-44384304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
155-391
               

               
Cow position:
               
chr22:7832385-7832152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
56, 145
               

               
Conread position:
               
155-391
               

               
Cow position:
               
chr22:27681686-27681921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
56, 170
               

               
Conread position:
               
155-391
               

               
Cow position:
               
chr22:36560689-36560453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
155-394
               

               
Cow position:
               
chr22:16251601-16251365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
58, 142
               

               
Conread position:
               
155-396
               

               
Cow position:
               
chr22:4132538-4132779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
43, 156
               

               
Conread position:
               
155-397
               

               
Cow position:
               
chr22:25846353-25846105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
56, 198
               

               
Conread position:
               
155-398
               

               
Cow position:
               
chr22:21530391-21530125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
155-399
               

               
Cow position:
               
chr22:23980239-23980002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
64, 165
               

               
Conread position:
               
155-399
               

               
Cow position:
               
chr22:27431732-27431479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 5
               

               
Conread position:
               
155-403
               

               
Cow position:
               
chr22:10752573-10752310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
58, 238
               

               
Conread position:
               
156-343
               

               
Cow position:
               
chr22:6326414-6326602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
57, 163
               

               
Conread position:
               
156-390
               

               
Cow position:
               
chr22:6289533-6289303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
57, 142
               

               
Conread position:
               
156-391
               

               
Cow position:
               
chr22:16541682-16541452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
57, 166
               

               
Conread position:
               
156-391
               

               
Cow position:
               
chr22:47562673-47562908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
52, 144
               

               
Conread position:
               
156-396
               

               
Cow position:
               
chr22:12678452-12678219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
53, 163
               

               
Conread position:
               
156-398
               

               
Cow position:
               
chr22:15618573-15618811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
156-399
               

               
Cow position:
               
chr22:6097047-6096811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
57, 144
               

               
Conread position:
               
156-399
               

               
Cow position:
               
chr22:44410694-44410921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
156-403
               

               
Cow position:
               
chr22:1975584-1975829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
171, 74
               

               
Conread position:
               
156-404
               

               
Cow position:
               
chr22:14691001-14690749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 168
               

               
Conread position:
               
157-307
               

               
Cow position:
               
chr22:12968098-12967945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
56, 143
               

               
Conread position:
               
157-314
               

               
Cow position:
               
chr22:2623547-2623390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
124, 111
               

               
Conread position:
               
157-391
               

               
Cow position:
               
chr22:3987487-3987719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
56, 143
               

               
Conread position:
               
157-392
               

               
Cow position:
               
chr22:3301368-3301138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
52, 163
               

               
Conread position:
               
157-396
               

               
Cow position:
               
chr22:1659135-1659369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 129
               

               
Conread position:
               
157-396
               

               
Cow position:
               
chr22:23077521-23077275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
47, 144
               

               
Conread position:
               
158-312
               

               
Cow position:
               
chr22:28120692-28120854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
158-391
               

               
Cow position:
               
chr22:1714893-1714664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-34
               

               
Alignm gaps (pig, cow):
               
61, 163
               

               
Conread position:
               
160-292
               

               
Cow position:
               
chr22:13222089-13222227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
160-376
               

               
Cow position:
               
chr22:14600360-14600151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
31, 83
               

               
Conread position:
               
160-385
               

               
Cow position:
               
chr22:22433016-22433237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
53, 162
               

               
Conread position:
               
160-388
               

               
Cow position:
               
chr22:1776033-1776257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
51, 145
               

               
Conread position:
               
160-388
               

               
Cow position:
               
chr22:28146650-28146876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 165
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr22:8412500-8412725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
35, 134
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr22:8418435-8418659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
59, 160
               

               
Conread position:
               
160-389
               

               
Cow position:
               
chr22:12929305-12929083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
53, 25
               

               
Conread position:
               
160-392
               

               
Cow position:
               
chr22:11352478-11352248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
53, 146
               

               
Conread position:
               
160-393
               

               
Cow position:
               
chr22:26339728-26339963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
51, 138
               

               
Conread position:
               
160-394
               

               
Cow position:
               
chr22:8324213-8324448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
48, 109
               

               
Conread position:
               
160-397
               

               
Cow position:
               
chr22:4310397-4310166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
51, 39
               

               
Conread position:
               
160-397
               

               
Cow position:
               
chr22:22860937-22860708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
53, 158
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr22:18933742-18933506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
53, 163
               

               
Conread position:
               
160-398
               

               
Cow position:
               
chr22:24336501-24336748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
55, 193
               

               
Conread position:
               
161-313
               

               
Cow position:
               
chr22:3950227-3950383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
161-313
               

               
Cow position:
               
chr22:13841115-13841269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
29, 136
               

               
Conread position:
               
161-378
               

               
Cow position:
               
chr22:2643905-2644117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
34, 160
               

               
Conread position:
               
161-385
               

               
Cow position:
               
chr22:16845429-16845202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
50, 168
               

               
Conread position:
               
161-387
               

               
Cow position:
               
chr22:14245466-14245245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
52, 87
               

               
Conread position:
               
161-392
               

               
Cow position:
               
chr22:25237166-25236931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
161-392
               

               
Cow position:
               
chr22:26112341-26112565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
52, 113
               

               
Conread position:
               
161-398
               

               
Cow position:
               
chr22:32661485-32661718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
46, 85
               

               
Conread position:
               
161-399
               

               
Cow position:
               
chr22:23265677-23265444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
49, 139
               

               
Conread position:
               
162-313
               

               
Cow position:
               
chr22:10533574-10533725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
162-381
               

               
Cow position:
               
chr22:13866640-13866855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
52, 160
               

               
Conread position:
               
162-391
               

               
Cow position:
               
chr22:7140620-7140845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
49, 159
               

               
Conread position:
               
162-392
               

               
Cow position:
               
chr22:14641880-14641658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 23
               

               
Conread position:
               
163-391
               

               
Cow position:
               
chr22:19414060-19413837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 159
               

               
Conread position:
               
164-292
               

               
Cow position:
               
chr22:15668490-15668366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
164-313
               

               
Cow position:
               
chr22:23126365-23126212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
164-394
               

               
Cow position:
               
chr22:12996830-12996609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
47, 110
               

               
Conread position:
               
164-399
               

               
Cow position:
               
chr22:24802722-24802485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
49, 141
               

               
Conread position:
               
166-390
               

               
Cow position:
               
chr22:24542342-24542560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
47, 80
               

               
Conread position:
               
166-398
               

               
Cow position:
               
chr22:40048536-40048762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
23, 121
               

               
Conread position:
               
167-397
               

               
Cow position:
               
chr22:3239893-3240130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 103
               

               
Conread position:
               
167-397
               

               
Cow position:
               
chr22:30750129-30749902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
45, 156
               

               
Conread position:
               
167-398
               

               
Cow position:
               
chr22:2876817-2876594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
44, 132
               

               
Conread position:
               
170-321
               

               
Cow position:
               
chr22:17294952-17294796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
170-382
               

               
Cow position:
               
chr22:34104688-34104459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
170-396
               

               
Cow position:
               
chr22:14487919-14488141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
43, 151
               

               
Conread position:
               
170-397
               

               
Cow position:
               
chr22:3486788-3486560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
29, 45
               

               
Conread position:
               
170-398
               

               
Cow position:
               
chr22:1065089-1065311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
49, 150
               

               
Conread position:
               
170-398
               

               
Cow position:
               
chr22:38947414-38947195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
171-311
               

               
Cow position:
               
chr22:21483933-21484070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
171-390
               

               
Cow position:
               
chr22:6709807-6709594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 105
               

               
Conread position:
               
171-397
               

               
Cow position:
               
chr22:30998871-30999093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
42, 150
               

               
Conread position:
               
172-394
               

               
Cow position:
               
chr22:14378706-14378491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
208, 122
               

               
Conread position:
               
174-391
               

               
Cow position:
               
chr22:4974383-4974161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 17
               

               
Conread position:
               
174-398
               

               
Cow position:
               
chr22:1540889-1541109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
33, 74
               

               
Conread position:
               
175-377
               

               
Cow position:
               
chr22:8330987-8331183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
38, 146
               

               
Conread position:
               
175-385
               

               
Cow position:
               
chr22:1710518-1710725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
44, 123
               

               
Conread position:
               
175-391
               

               
Cow position:
               
chr22:1821596-1821392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 150
               

               
Conread position:
               
175-391
               

               
Cow position:
               
chr22:19376666-19376871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
175-391
               

               
Cow position:
               
chr22:30606845-30607056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
44, 146
               

               
Conread position:
               
175-398
               

               
Cow position:
               
chr22:16797859-16797629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
176-392
               

               
Cow position:
               
chr22:8535664-8535879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
37, 123
               

               
Conread position:
               
179-403
               

               
Cow position:
               
chr22:4628546-4628771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
29, 143
               

               
Conread position:
               
182-397
               

               
Cow position:
               
chr22:1046196-1045984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
29, 116
               

               
Conread position:
               
185-393
               

               
Cow position:
               
chr22:41025754-41025957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
10, 62
               

               
Conread position:
               
185-396
               

               
Cow position:
               
chr22:35578776-35578574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
28, 88
               

               
Conread position:
               
186-313
               

               
Cow position:
               
chr22:3997755-3997886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
9, 14
               

               
Conread position:
               
186-330
               

               
Cow position:
               
chr22:12599371-12599518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
186-390
               

               
Cow position:
               
chr22:33373243-33373439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
93, 41
               

               
Conread position:
               
186-397
               

               
Cow position:
               
chr22:6106374-6106168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
186-397
               

               
Cow position:
               
chr22:10371633-10371843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
23, 144
               

               
Conread position:
               
186-399
               

               
Cow position:
               
chr22:2409132-2408923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 112
               

               
Conread position:
               
186-399
               

               
Cow position:
               
chr22:11468374-11468606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
187-395
               

               
Cow position:
               
chr22:29219899-29219701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
187-403
               

               
Cow position:
               
chr22:7067446-7067665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 116
               

               
Conread position:
               
189-399
               

               
Cow position:
               
chr22:2704301-2704504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
24, 130
               

               
Conread position:
               
190-399
               

               
Cow position:
               
chr22:12914618-12914837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
191-379
               

               
Cow position:
               
chr22:35533227-35533044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
192-311
               

               
Cow position:
               
chr22:44684493-44684614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
21, 47
               

               
Conread position:
               
192-319
               

               
Cow position:
               
chr22:2516898-2516770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
192-399
               

               
Cow position:
               
chr22:6485972-6486169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
195-399
               

               
Cow position:
               
chr22:1728244-1728437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
196-392
               

               
Cow position:
               
chr22:45684027-45683835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
14, 112
               

               
Conread position:
               
196-396
               

               
Cow position:
               
chr22:25811937-25811731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
13, 123
               

               
Conread position:
               
198-389
               

               
Cow position:
               
chr22:31064415-31064610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 36
               

               
Conread position:
               
198-396
               

               
Cow position:
               
chr22:25312525-25312717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
150, 119
               

               
Conread position:
               
199-391
               

               
Cow position:
               
chr22:22022918-22023101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
199-391
               

               
Cow position:
               
chr22:27591209-27591398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
7, 124
               

               
Conread position:
               
199-391
               

               
Cow position:
               
chr22:36209270-36209453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
199-396
               

               
Cow position:
               
chr22:16057992-16058198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
11, 68
               

               
Conread position:
               
200-392
               

               
Cow position:
               
chr22:12258701-12258507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
92, 130
               

               
Conread position:
               
207-399
               

               
Cow position:
               
chr22:18403270-18403452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
208-391
               

               
Cow position:
               
chr22:11790009-11790183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
208-392
               

               
Cow position:
               
chr22:36762064-36762235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
208-399
               

               
Cow position:
               
chr22:35627374-35627555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
209-389
               

               
Cow position:
               
chr22:27643764-27643948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
84, 33
               

               
Conread position:
               
209-390
               

               
Cow position:
               
chr22:33030825-33031005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr22:9325864-9326038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
45, 41
               

               
Conread position:
               
209-391
               

               
Cow position:
               
chr22:22266335-22266519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
209-393
               

               
Cow position:
               
chr22:6494188-6494374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
209-397
               

               
Cow position:
               
chr22:39472131-39471952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
209-399
               

               
Cow position:
               
chr22:11039482-11039663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-25
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
210-403
               

               
Cow position:
               
chr22:8138237-8138045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
174, 84
               

               
Conread position:
               
211-367
               

               
Cow position:
               
chr22:13326923-13327093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
9e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
211-378
               

               
Cow position:
               
chr22:27066407-27066567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
211-391
               

               
Cow position:
               
chr22:36569297-36569112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
56, 28
               

               
Conread position:
               
215-391
               

               
Cow position:
               
chr22:8480136-8480306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
215-392
               

               
Cow position:
               
chr22:8504372-8504551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
85, 23
               

               
Conread position:
               
216-390
               

               
Cow position:
               
chr22:9075441-9075607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
141, 98
               

               
Conread position:
               
218-397
               

               
Cow position:
               
chr22:30583690-30583860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
219-399
               

               
Cow position:
               
chr22:7415017-7414843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
220-396
               

               
Cow position:
               
chr22:24557488-24557321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
163, 31
               

               
Conread position:
               
230-391
               

               
Cow position:
               
chr22:800019-800179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
153, 79
               
Show alignments to all cow chromosomes.