Cow genome map

Conread name: rplac_3633.y1

Conread position: 142-390
Cow position:
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 137

Conread position: 142-399
Cow position:
Alignm length: 267
Alignm identity: 189
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 151

Conread position: 143-392
Cow position:
Alignm length: 250
Alignm identity: 181
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 19, 0

Conread position: 143-392
Cow position:
Alignm length: 255
Alignm identity: 188
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 70, 19

Conread position: 143-396
Cow position:
Alignm length: 254
Alignm identity: 185
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 143-402
Cow position:
Alignm length: 267
Alignm identity: 190
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 68, 17

Conread position: 144-313
Cow position:
Alignm length: 174
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 69, 14

Conread position: 144-391
Cow position:
Alignm length: 263
Alignm identity: 194
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 131, 53

Conread position: 144-391
Cow position:
Alignm length: 269
Alignm identity: 192
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 43, 47

Conread position: 144-396
Cow position:
Alignm length: 259
Alignm identity: 187
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 65, 98

Conread position: 144-397
Cow position:
Alignm length: 262
Alignm identity: 184
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 14

Conread position: 144-397
Cow position:
Alignm length: 259
Alignm identity: 190
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 55, 132

Conread position: 145-387
Cow position:
Alignm length: 257
Alignm identity: 175
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 145-397
Cow position:
Alignm length: 257
Alignm identity: 176
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 160

Conread position: 147-378
Cow position:
Alignm length: 232
Alignm identity: 166
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 65, 0

Conread position: 147-396
Cow position:
Alignm length: 266
Alignm identity: 199
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 71, 33

Conread position: 149-397
Cow position:
Alignm length: 266
Alignm identity: 195
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 49, 0

Conread position: 150-377
Cow position:
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 13, 116

Conread position: 150-391
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 177

Conread position: 150-398
Cow position:
Alignm length: 253
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 86

Conread position: 150-399
Cow position:
Alignm length: 255
Alignm identity: 181
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 63, 36

Conread position: 150-403
Cow position:
Alignm length: 256
Alignm identity: 169
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 38, 148

Conread position: 151-397
Cow position:
Alignm length: 251
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 59, 136

Conread position: 151-398
Cow position:
Alignm length: 252
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 50, 153

Conread position: 151-399
Cow position:
Alignm length: 254
Alignm identity: 173
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 11, 17

Conread position: 151-399
Cow position:
Alignm length: 252
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 0

Conread position: 152-292
Cow position:
Alignm length: 144
Alignm identity: 113
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 152-310
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 123, 59

Conread position: 152-312
Cow position:
Alignm length: 164
Alignm identity: 128
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 147

Conread position: 152-390
Cow position:
Alignm length: 243
Alignm identity: 179
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 152

Conread position: 152-391
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 152-391
Cow position:
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 44

Conread position: 152-392
Cow position:
Alignm length: 244
Alignm identity: 180
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 71

Conread position: 152-393
Cow position:
Alignm length: 247
Alignm identity: 179
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 44, 149

Conread position: 152-398
Cow position:
Alignm length: 264
Alignm identity: 186
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 66, 110

Conread position: 152-399
Cow position:
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 62, 32

Conread position: 152-403
Cow position:
Alignm length: 259
Alignm identity: 188
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 142, 46

Conread position: 153-378
Cow position:
Alignm length: 230
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 172

Conread position: 153-382
Cow position:
Alignm length: 234
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 54, 7

Conread position: 153-382
Cow position:
Alignm length: 234
Alignm identity: 168
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 157, 167

Conread position: 153-388
Cow position:
Alignm length: 239
Alignm identity: 159
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 60, 177

Conread position: 153-391
Cow position:
Alignm length: 254
Alignm identity: 186
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 58, 0

Conread position: 153-394
Cow position:
Alignm length: 255
Alignm identity: 183
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 60, 26

Conread position: 153-395
Cow position:
Alignm length: 247
Alignm identity: 187
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 58, 133

Conread position: 153-397
Cow position:
Alignm length: 245
Alignm identity: 178
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 153-398
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 0

Conread position: 153-398
Cow position:
Alignm length: 251
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 123

Conread position: 153-398
Cow position:
Alignm length: 246
Alignm identity: 176
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 0

Conread position: 153-399
Cow position:
Alignm length: 249
Alignm identity: 175
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 59, 142

Conread position: 153-400
Cow position:
Alignm length: 254
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 133

Conread position: 153-402
Cow position:
Alignm length: 250
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 62, 0

Conread position: 153-403
Cow position:
Alignm length: 257
Alignm identity: 171
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 7, 133

Conread position: 153-404
Cow position:
Alignm length: 266
Alignm identity: 194
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 86, 0

Conread position: 154-307
Cow position:
Alignm length: 165
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 154-314
Cow position:
Alignm length: 165
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 34, 146

Conread position: 154-377
Cow position:
Alignm length: 231
Alignm identity: 172
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 59, 26

Conread position: 154-378
Cow position:
Alignm length: 236
Alignm identity: 166
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 59, 168

Conread position: 154-390
Cow position:
Alignm length: 237
Alignm identity: 173
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 36, 0

Conread position: 154-391
Cow position:
Alignm length: 238
Alignm identity: 164
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 121, 0

Conread position: 154-393
Cow position:
Alignm length: 240
Alignm identity: 171
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 171, 0

Conread position: 154-393
Cow position:
Alignm length: 259
Alignm identity: 176
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 154-395
Cow position:
Alignm length: 247
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 56, 120

Conread position: 154-397
Cow position:
Alignm length: 249
Alignm identity: 188
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 57, 121

Conread position: 154-397
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 82

Conread position: 154-398
Cow position:
Alignm length: 249
Alignm identity: 185
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 59, 109

Conread position: 154-398
Cow position:
Alignm length: 249
Alignm identity: 169
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 172

Conread position: 154-398
Cow position:
Alignm length: 248
Alignm identity: 171
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 65, 9

Conread position: 154-401
Cow position:
Alignm length: 250
Alignm identity: 180
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 17, 61

Conread position: 155-292
Cow position:
Alignm length: 140
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 53, 0

Conread position: 155-308
Cow position:
Alignm length: 155
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 155-310
Cow position:
Alignm length: 158
Alignm identity: 127
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 53, 143

Conread position: 155-390
Cow position:
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 55, 137

Conread position: 155-392
Cow position:
Alignm length: 242
Alignm identity: 170
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 64, 81

Conread position: 155-393
Cow position:
Alignm length: 247
Alignm identity: 185
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 37, 150

Conread position: 155-397
Cow position:
Alignm length: 250
Alignm identity: 182
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 148

Conread position: 155-398
Cow position:
Alignm length: 244
Alignm identity: 183
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 59, 0

Conread position: 155-399
Cow position:
Alignm length: 247
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 89, 147

Conread position: 155-404
Cow position:
Alignm length: 261
Alignm identity: 194
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 58, 26

Conread position: 156-304
Cow position:
Alignm length: 152
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 157-387
Cow position:
Alignm length: 236
Alignm identity: 179
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 62, 16

Conread position: 157-395
Cow position:
Alignm length: 247
Alignm identity: 186
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 55, 108

Conread position: 160-269
Cow position:
Alignm length: 113
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 50, 10

Conread position: 160-313
Cow position:
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 160-317
Cow position:
Alignm length: 162
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 53, 0

Conread position: 160-389
Cow position:
Alignm length: 233
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 185, 38

Conread position: 160-392
Cow position:
Alignm length: 236
Alignm identity: 181
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 53, 38

Conread position: 160-399
Cow position:
Alignm length: 242
Alignm identity: 165
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 142, 78

Conread position: 161-397
Cow position:
Alignm length: 245
Alignm identity: 183
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 51, 0

Conread position: 161-397
Cow position:
Alignm length: 243
Alignm identity: 183
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 40, 116

Conread position: 161-403
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 57, 136

Conread position: 162-379
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 51, 136

Conread position: 163-396
Cow position:
Alignm length: 240
Alignm identity: 182
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 35, 122

Conread position: 164-302
Cow position:
Alignm length: 139
Alignm identity: 107
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 166-309
Cow position:
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 45, 33

Conread position: 169-393
Cow position:
Alignm length: 234
Alignm identity: 161
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 170-397
Cow position:
Alignm length: 230
Alignm identity: 165
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 39, 130

Conread position: 171-396
Cow position:
Alignm length: 227
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 42, 126

Conread position: 171-399
Cow position:
Alignm length: 235
Alignm identity: 180
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 42, 129

Conread position: 172-364
Cow position:
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 115

Conread position: 173-398
Cow position:
Alignm length: 231
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 53

Conread position: 174-381
Cow position:
Alignm length: 214
Alignm identity: 158
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 24, 126

Conread position: 176-397
Cow position:
Alignm length: 226
Alignm identity: 165
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 43, 122

Conread position: 177-391
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 42, 128

Conread position: 182-398
Cow position:
Alignm length: 221
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 37, 139

Conread position: 185-377
Cow position:
Alignm length: 197
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 49

Conread position: 185-390
Cow position:
Alignm length: 211
Alignm identity: 158
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 28, 120

Conread position: 185-391
Cow position:
Alignm length: 212
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 34, 137

Conread position: 185-398
Cow position:
Alignm length: 218
Alignm identity: 159
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 28, 134

Conread position: 185-399
Cow position:
Alignm length: 224
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 28, 183

Conread position: 185-404
Cow position:
Alignm length: 224
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 18, 42

Conread position: 186-311
Cow position:
Alignm length: 128
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 186-397
Cow position:
Alignm length: 226
Alignm identity: 164
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 27, 128

Conread position: 186-399
Cow position:
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 110, 0

Conread position: 186-400
Cow position:
Alignm length: 220
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 27, 145

Conread position: 187-389
Cow position:
Alignm length: 207
Alignm identity: 155
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 32, 88

Conread position: 188-390
Cow position:
Alignm length: 207
Alignm identity: 158
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 25, 66

Conread position: 190-399
Cow position:
Alignm length: 221
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 23, 48

Conread position: 191-366
Cow position:
Alignm length: 180
Alignm identity: 127
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 22, 127

Conread position: 192-313
Cow position:
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 192-397
Cow position:
Alignm length: 220
Alignm identity: 168
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 21, 0

Conread position: 193-310
Cow position:
Alignm length: 119
Alignm identity: 99
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 193-402
Cow position:
Alignm length: 211
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 191, 128

Conread position: 195-399
Cow position:
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 14, 129

Conread position: 195-404
Cow position:
Alignm length: 214
Alignm identity: 150
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 130

Conread position: 196-394
Cow position:
Alignm length: 201
Alignm identity: 143
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 13, 34

Conread position: 198-324
Cow position:
Alignm length: 130
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 15, 94

Conread position: 199-391
Cow position:
Alignm length: 193
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 199-391
Cow position:
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 199-399
Cow position:
Alignm length: 201
Alignm identity: 144
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 12, 0

Conread position: 200-390
Cow position:
Alignm length: 197
Alignm identity: 145
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 128, 10

Conread position: 200-392
Cow position:
Alignm length: 194
Alignm identity: 133
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 183, 30

Conread position: 206-390
Cow position:
Alignm length: 188
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 118, 95

Conread position: 209-390
Cow position:
Alignm length: 182
Alignm identity: 131
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 209-391
Cow position:
Alignm length: 183
Alignm identity: 135
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 87, 0

Conread position: 209-393
Cow position:
Alignm length: 185
Alignm identity: 130
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 118, 0

Conread position: 209-395
Cow position:
Alignm length: 187
Alignm identity: 132
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 209-398
Cow position:
Alignm length: 190
Alignm identity: 139
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 108, 0

Conread position: 209-398
Cow position:
Alignm length: 191
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 174, 78

Conread position: 210-390
Cow position:
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 91, 35

Conread position: 214-385
Cow position:
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 95

Conread position: 214-403
Cow position:
Alignm length: 194
Alignm identity: 147
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 82, 0

Conread position: 216-393
Cow position:
Alignm length: 187
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 233-403
Cow position:
Alignm length: 173
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 147, 84

Show alignments to all cow chromosomes.