Cow genome map

Conread name: rplac_3633.y1

Conread position: 138-371
Cow position: chr26:29664187-29663957 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 76, 185

Conread position: 142-396
Cow position: chr26:32553659-32553935 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 194
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 142-399
Cow position: chr26:18529764-18530012 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 172
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 142-404
Cow position: chr26:26294216-26293950 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 194
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 149, 211

Conread position: 143-394
Cow position: chr26:30254655-30254398 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 199
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 66, 17

Conread position: 144-391
Cow position: chr26:33744878-33745131 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 87

Conread position: 144-392
Cow position: chr26:23097202-23096975 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 0

Conread position: 144-392
Cow position: chr26:27177096-27176849 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 177
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 127, 8

Conread position: 144-398
Cow position: chr26:829784-830037 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 189
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 63, 14

Conread position: 144-399
Cow position: chr26:33253338-33253092 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 18, 8

Conread position: 144-403
Cow position: chr26:35449041-35449282 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 190
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 69, 111

Conread position: 145-388
Cow position: chr26:9839564-9839326 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 183
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 59, 103

Conread position: 148-385
Cow position: chr26:16435677-16435440 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 9, 155

Conread position: 148-399
Cow position: chr26:32831592-32831352 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 77

Conread position: 149-399
Cow position: chr26:7148323-7148076 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 179
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 13, 136

Conread position: 150-391
Cow position: chr26:16549968-16550204 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 175

Conread position: 150-394
Cow position: chr26:19774316-19774055 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 197
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 23, 0

Conread position: 150-398
Cow position: chr26:25663562-25663325 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 175
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 36

Conread position: 151-391
Cow position: chr26:11538518-11538752 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 174
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 62, 9

Conread position: 152-291
Cow position: chr26:28374457-28374314 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 152-295
Cow position: chr26:25074703-25074850 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 122
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 152-304
Cow position: chr26:33011682-33011529 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 61, 80

Conread position: 152-311
Cow position: chr26:32120619-32120775 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 15, 34

Conread position: 152-389
Cow position: chr26:31633714-31633946 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 44, 169

Conread position: 152-391
Cow position: chr26:18872594-18872829 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 153

Conread position: 152-392
Cow position: chr26:6037449-6037204 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 37, 90

Conread position: 152-397
Cow position: chr26:32518456-32518701 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 171
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 61, 174

Conread position: 152-398
Cow position: chr26:6794131-6794370 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 187
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 172

Conread position: 152-398
Cow position: chr26:8811113-8811354 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 177
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 55, 166

Conread position: 152-404
Cow position: chr26:32571279-32571550 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 199
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 58, 0

Conread position: 153-311
Cow position: chr26:13828062-13828213 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 40

Conread position: 153-370
Cow position: chr26:2739469-2739242 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 170
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 41, 0

Conread position: 153-378
Cow position: chr26:32601338-32601559 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 177
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 60, 24

Conread position: 153-389
Cow position: chr26:11672284-11672515 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 176
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 57, 147

Conread position: 153-391
Cow position: chr26:10965607-10965369 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 177
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 58, 144

Conread position: 153-392
Cow position: chr26:22349025-22348792 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 59, 147

Conread position: 153-393
Cow position: chr26:4585223-4584993 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 163

Conread position: 153-397
Cow position: chr26:6714313-6714076 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 149

Conread position: 153-398
Cow position: chr26:10764199-10764438 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 170
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 69, 133

Conread position: 153-398
Cow position: chr26:12940387-12940631 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 55, 166

Conread position: 154-291
Cow position: chr26:5985824-5985688 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 154-313
Cow position: chr26:22152215-22152377 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 155

Conread position: 154-379
Cow position: chr26:4167365-4167145 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 163
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 111

Conread position: 154-386
Cow position: chr26:23624056-23623832 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 57, 130

Conread position: 154-391
Cow position: chr26:677992-677744 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 175
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 54, 0

Conread position: 154-391
Cow position: chr26:32834589-32834357 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 178
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 55, 142

Conread position: 154-397
Cow position: chr26:34027047-34026811 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 56, 165

Conread position: 154-398
Cow position: chr26:24453919-24453686 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 184
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 59, 143

Conread position: 155-307
Cow position: chr26:17057667-17057824 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 155-315
Cow position: chr26:32836228-32836391 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 145

Conread position: 155-390
Cow position: chr26:32830070-32830299 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 172
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 97

Conread position: 155-395
Cow position: chr26:14905819-14905596 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 56, 143

Conread position: 155-397
Cow position: chr26:12964705-12964459 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 176
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 58, 0

Conread position: 155-398
Cow position: chr26:34580792-34581037 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 58, 175

Conread position: 156-404
Cow position: chr26:586888-586643 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 55, 14

Conread position: 157-313
Cow position: chr26:16594508-16594351 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 56, 0

Conread position: 157-397
Cow position: chr26:647732-647500 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 53, 42

Conread position: 157-399
Cow position: chr26:2701993-2701760 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 52, 73

Conread position: 159-289
Cow position: chr26:18876969-18876835 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 52, 0

Conread position: 161-323
Cow position: chr26:23599803-23599639 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 35, 90

Conread position: 161-399
Cow position: chr26:17398571-17398800 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 52, 160

Conread position: 162-376
Cow position: chr26:32353724-32353520 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 163
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 131

Conread position: 162-381
Cow position: chr26:19671474-19671684 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 170
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 49, 75

Conread position: 162-389
Cow position: chr26:5168394-5168607 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 173
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 113, 56

Conread position: 162-396
Cow position: chr26:34060329-34060557 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 51, 149

Conread position: 164-394
Cow position: chr26:33527016-33526780 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 137, 118

Conread position: 165-379
Cow position: chr26:22901262-22901049 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 162, 0

Conread position: 169-378
Cow position: chr26:9501712-9501913 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 33, 151

Conread position: 170-389
Cow position: chr26:25197312-25197087 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 65

Conread position: 170-399
Cow position: chr26:25225729-25225504 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 132

Conread position: 172-395
Cow position: chr26:16796200-16795992 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 168
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 124, 0

Conread position: 174-392
Cow position: chr26:5406987-5407197 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 36, 126

Conread position: 176-379
Cow position: chr26:28243840-28244036 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 37, 9

Conread position: 180-397
Cow position: chr26:9662214-9662006 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 39, 47

Conread position: 181-307
Cow position: chr26:32503320-32503197 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 31, 0

Conread position: 186-312
Cow position: chr26:15599506-15599377 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 27, 89

Conread position: 186-385
Cow position: chr26:6823181-6823370 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 23, 44

Conread position: 186-392
Cow position: chr26:28202737-28202538 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 133

Conread position: 186-399
Cow position: chr26:2930235-2930028 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 158, 115

Conread position: 190-382
Cow position: chr26:32825976-32825776 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 157
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 20, 85

Conread position: 190-403
Cow position: chr26:12028213-12028002 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 160
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 17, 115

Conread position: 193-390
Cow position: chr26:9684395-9684591 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 134, 0

Conread position: 196-392
Cow position: chr26:15132669-15132858 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 141
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 14, 123

Conread position: 196-398
Cow position: chr26:27482531-27482339 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 156
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 14, 0

Conread position: 199-398
Cow position: chr26:13705742-13705545 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 154
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 12, 74

Conread position: 199-403
Cow position: chr26:21588951-21588746 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 200-397
Cow position: chr26:16801018-16801208 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 143
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 42

Conread position: 206-389
Cow position: chr26:12992390-12992564 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 177, 12

Conread position: 209-391
Cow position: chr26:8811519-8811691 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 19, 0

Conread position: 209-396
Cow position: chr26:33691441-33691243 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 209-398
Cow position: chr26:26245123-26244945 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 52, 0

Conread position: 210-397
Cow position: chr26:31712020-31711841 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 173, 107

Conread position: 224-397
Cow position: chr26:10220166-10220000 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 0

Conread position: 226-392
Cow position: chr26:25029597-25029754 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 231-387
Cow position: chr26:32842718-32842571 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 231-391
Cow position: chr26:21311855-21311700 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 272-403
Cow position: chr26:10933827-10933698 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Show alignments to all cow chromosomes.