Cow genome map
| Conread name: | rplac_3633.y1 |
| Conread position: | 130-389 |
| Cow position: | chr28:18770039-18770290 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 135-379 |
| Cow position: | chr28:27721659-27721889 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 22, 43 |
| Conread position: | 141-398 |
| Cow position: | chr28:2077453-2077713 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 48, 173 |
| Conread position: | 142-319 |
| Cow position: | chr28:25677378-25677195 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 143-292 |
| Cow position: | chr28:7156803-7156955 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 70, 9 |
| Conread position: | 143-396 |
| Cow position: | chr28:10053363-10053122 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 186 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 60, 17 |
| Conread position: | 143-398 |
| Cow position: | chr28:4307934-4307681 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 29, 158 |
| Conread position: | 144-305 |
| Cow position: | chr28:10297823-10297982 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 144-312 |
| Cow position: | chr28:22321394-22321556 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 144-377 |
| Cow position: | chr28:26743593-26743822 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 6 |
| Conread position: | 144-379 |
| Cow position: | chr28:15601245-15601467 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 70, 15 |
| Conread position: | 144-395 |
| Cow position: | chr28:3011303-3011058 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 69, 84 |
| Conread position: | 144-399 |
| Cow position: | chr28:9812245-9812496 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 144-399 |
| Cow position: | chr28:33052001-33052271 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 37, 142 |
| Conread position: | 147-398 |
| Cow position: | chr28:5630068-5630311 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 194 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 66, 13 |
| Conread position: | 147-402 |
| Cow position: | chr28:17739794-17740041 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 63, 171 |
| Conread position: | 148-397 |
| Cow position: | chr28:11398827-11398582 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 71, 173 |
| Conread position: | 149-398 |
| Cow position: | chr28:32179667-32179911 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 16, 157 |
| Conread position: | 149-400 |
| Cow position: | chr28:9099907-9100142 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 68, 79 |
| Conread position: | 150-307 |
| Cow position: | chr28:21355204-21355364 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 150-388 |
| Cow position: | chr28:12430578-12430808 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 67, 124 |
| Conread position: | 150-390 |
| Cow position: | chr28:13356395-13356162 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 80, 46 |
| Conread position: | 150-393 |
| Cow position: | chr28:29434455-29434200 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 63, 10 |
| Conread position: | 150-397 |
| Cow position: | chr28:5437113-5436875 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 58, 96 |
| Conread position: | 150-398 |
| Cow position: | chr28:7698006-7697767 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 150-398 |
| Cow position: | chr28:8827136-8827376 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 23, 47 |
| Conread position: | 150-399 |
| Cow position: | chr28:13245532-13245777 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 13, 172 |
| Conread position: | 150-399 |
| Cow position: | chr28:16204363-16204117 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 9, 135 |
| Conread position: | 151-395 |
| Cow position: | chr28:7964695-7964469 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 152-291 |
| Cow position: | chr28:5230152-5230013 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 15 |
| Conread position: | 152-296 |
| Cow position: | chr28:7805447-7805299 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 152-305 |
| Cow position: | chr28:19216795-19216952 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 152-313 |
| Cow position: | chr28:11559658-11559493 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 152-323 |
| Cow position: | chr28:23047594-23047768 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 152-392 |
| Cow position: | chr28:3411013-3410783 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 57, 99 |
| Conread position: | 152-392 |
| Cow position: | chr28:26982764-26982530 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 46, 147 |
| Conread position: | 152-397 |
| Cow position: | chr28:4881265-4881038 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 152-397 |
| Cow position: | chr28:7009003-7008770 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 59, 10 |
| Conread position: | 152-398 |
| Cow position: | chr28:3449277-3449521 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 61, 120 |
| Conread position: | 152-398 |
| Cow position: | chr28:5144547-5144302 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 146 |
| Conread position: | 152-398 |
| Cow position: | chr28:6283514-6283278 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 67, 166 |
| Conread position: | 152-398 |
| Cow position: | chr28:27218298-27218537 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 61, 8 |
| Conread position: | 153-295 |
| Cow position: | chr28:4765649-4765797 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 153-307 |
| Cow position: | chr28:2819750-2819908 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 60, 132 |
| Conread position: | 153-308 |
| Cow position: | chr28:7388792-7388638 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 153-324 |
| Cow position: | chr28:7498172-7497993 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 153-385 |
| Cow position: | chr28:22183172-22182934 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 87, 151 |
| Conread position: | 153-386 |
| Cow position: | chr28:7267967-7267749 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 153-386 |
| Cow position: | chr28:19222175-19221937 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 60, 24 |
| Conread position: | 153-388 |
| Cow position: | chr28:751202-751430 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 60, 99 |
| Conread position: | 153-390 |
| Cow position: | chr28:34230203-34230436 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 60, 168 |
| Conread position: | 153-391 |
| Cow position: | chr28:21103852-21103615 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 124 |
| Conread position: | 153-392 |
| Cow position: | chr28:3484557-3484792 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 60, 36 |
| Conread position: | 153-392 |
| Cow position: | chr28:5235855-5236080 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 153-395 |
| Cow position: | chr28:19564253-19564026 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 60, 131 |
| Conread position: | 153-399 |
| Cow position: | chr28:4873370-4873112 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 70, 241 |
| Conread position: | 153-399 |
| Cow position: | chr28:5199795-5200040 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 48, 155 |
| Conread position: | 154-295 |
| Cow position: | chr28:26719319-26719465 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 154-309 |
| Cow position: | chr28:12933758-12933595 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 154-382 |
| Cow position: | chr28:5867703-5867936 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 55, 39 |
| Conread position: | 154-382 |
| Cow position: | chr28:12672489-12672265 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 168 |
| Conread position: | 154-388 |
| Cow position: | chr28:24672241-24672470 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 150 |
| Conread position: | 154-390 |
| Cow position: | chr28:6935210-6934972 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 10, 155 |
| Conread position: | 154-391 |
| Cow position: | chr28:4282514-4282284 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 49, 137 |
| Conread position: | 154-391 |
| Cow position: | chr28:23460125-23460349 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 154-394 |
| Cow position: | chr28:7372146-7371902 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 53, 201 |
| Conread position: | 154-394 |
| Cow position: | chr28:12964546-12964790 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 154-394 |
| Cow position: | chr28:27161350-27161108 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 56, 92 |
| Conread position: | 154-398 |
| Cow position: | chr28:1837969-1838208 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 154-398 |
| Cow position: | chr28:3726235-3725996 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 191 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 46, 146 |
| Conread position: | 154-398 |
| Cow position: | chr28:10495322-10495088 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 186 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 22, 141 |
| Conread position: | 154-398 |
| Cow position: | chr28:13133608-13133847 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 59, 150 |
| Conread position: | 154-398 |
| Cow position: | chr28:20759725-20759481 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 59, 95 |
| Conread position: | 154-399 |
| Cow position: | chr28:10615970-10615737 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 59, 143 |
| Conread position: | 155-305 |
| Cow position: | chr28:3143898-3143747 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 155-375 |
| Cow position: | chr28:18370028-18369824 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 155-381 |
| Cow position: | chr28:23578877-23579097 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 8, 119 |
| Conread position: | 155-391 |
| Cow position: | chr28:4937265-4937034 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 55, 166 |
| Conread position: | 155-391 |
| Cow position: | chr28:5236627-5236390 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 58, 172 |
| Conread position: | 155-393 |
| Cow position: | chr28:17680599-17680832 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 53, 130 |
| Conread position: | 156-396 |
| Cow position: | chr28:34877989-34877762 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 156-398 |
| Cow position: | chr28:11743841-11743616 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 57, 47 |
| Conread position: | 157-313 |
| Cow position: | chr28:8149653-8149493 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 157-390 |
| Cow position: | chr28:19262606-19262380 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 54, 13 |
| Conread position: | 157-399 |
| Cow position: | chr28:8408713-8408971 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 158-399 |
| Cow position: | chr28:13048303-13048066 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 55, 37 |
| Conread position: | 159-394 |
| Cow position: | chr28:12951404-12951624 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 160-305 |
| Cow position: | chr28:30865401-30865548 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 160-308 |
| Cow position: | chr28:4355527-4355680 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 160-317 |
| Cow position: | chr28:17601572-17601411 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 160-361 |
| Cow position: | chr28:2898971-2899173 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 50, 167 |
| Conread position: | 160-391 |
| Cow position: | chr28:5231920-5232146 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 51, 115 |
| Conread position: | 161-292 |
| Cow position: | chr28:5166751-5166885 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 161-376 |
| Cow position: | chr28:20397387-20397176 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 50, 137 |
| Conread position: | 161-394 |
| Cow position: | chr28:34843589-34843364 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 52, 140 |
| Conread position: | 162-395 |
| Cow position: | chr28:8259612-8259841 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 49, 136 |
| Conread position: | 162-398 |
| Cow position: | chr28:8347715-8347947 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 49, 159 |
| Conread position: | 164-397 |
| Cow position: | chr28:1632666-1632435 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 31, 21 |
| Conread position: | 164-397 |
| Cow position: | chr28:10480821-10480591 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 45, 19 |
| Conread position: | 166-396 |
| Cow position: | chr28:6563910-6563683 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 47, 156 |
| Conread position: | 166-404 |
| Cow position: | chr28:11828968-11828738 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 47, 26 |
| Conread position: | 167-395 |
| Cow position: | chr28:28501222-28501450 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 168-385 |
| Cow position: | chr28:19039029-19038819 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 45, 132 |
| Conread position: | 169-376 |
| Cow position: | chr28:5245348-5245549 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 170-394 |
| Cow position: | chr28:24064903-24064684 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 53, 111 |
| Conread position: | 170-395 |
| Cow position: | chr28:4158947-4159173 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 157 |
| Conread position: | 170-396 |
| Cow position: | chr28:9705645-9705866 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 32, 24 |
| Conread position: | 172-398 |
| Cow position: | chr28:6358420-6358197 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 172-403 |
| Cow position: | chr28:26826217-26826440 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 211, 145 |
| Conread position: | 174-395 |
| Cow position: | chr28:5441901-5441688 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 37, 58 |
| Conread position: | 175-390 |
| Cow position: | chr28:6321814-6322023 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 38, 88 |
| Conread position: | 176-398 |
| Cow position: | chr28:4163581-4163368 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 177-397 |
| Cow position: | chr28:12973880-12974095 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 30, 123 |
| Conread position: | 181-388 |
| Cow position: | chr28:19994943-19994744 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 97, 136 |
| Conread position: | 181-399 |
| Cow position: | chr28:9418963-9418735 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 183-399 |
| Cow position: | chr28:5152604-5152828 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 14, 178 |
| Conread position: | 185-313 |
| Cow position: | chr28:4022680-4022812 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 185-378 |
| Cow position: | chr28:20013442-20013644 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 26, 152 |
| Conread position: | 185-389 |
| Cow position: | chr28:4073976-4074180 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 26, 129 |
| Conread position: | 185-399 |
| Cow position: | chr28:117756-117545 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 116 |
| Conread position: | 186-313 |
| Cow position: | chr28:2743091-2743221 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 104 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 186-328 |
| Cow position: | chr28:8167342-8167201 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 186-385 |
| Cow position: | chr28:20968570-20968377 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 23, 97 |
| Conread position: | 186-388 |
| Cow position: | chr28:8716377-8716178 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 12, 117 |
| Conread position: | 186-391 |
| Cow position: | chr28:26820266-26820071 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 188-389 |
| Cow position: | chr28:26530856-26530664 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 19, 102 |
| Conread position: | 190-391 |
| Cow position: | chr28:19024445-19024655 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 191-391 |
| Cow position: | chr28:659282-659082 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 22, 136 |
| Conread position: | 191-394 |
| Cow position: | chr28:3137556-3137761 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 22, 121 |
| Conread position: | 193-392 |
| Cow position: | chr28:3423792-3423983 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 20, 99 |
| Conread position: | 193-398 |
| Cow position: | chr28:11827703-11827900 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 20, 102 |
| Conread position: | 194-392 |
| Cow position: | chr28:9430708-9430502 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 17, 141 |
| Conread position: | 194-399 |
| Cow position: | chr28:7644756-7644958 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 20, 66 |
| Conread position: | 199-398 |
| Cow position: | chr28:2892277-2892468 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 199-398 |
| Cow position: | chr28:4870780-4870584 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 199-398 |
| Cow position: | chr28:17620339-17620147 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 14, 41 |
| Conread position: | 200-399 |
| Cow position: | chr28:9639676-9639866 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 209-378 |
| Cow position: | chr28:26269421-26269591 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 209-399 |
| Cow position: | chr28:118644-118827 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 54, 88 |
| Conread position: | 209-403 |
| Cow position: | chr28:8898079-8898271 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 210-397 |
| Cow position: | chr28:11562210-11562032 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 211-399 |
| Cow position: | chr28:4077309-4077124 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 213-399 |
| Cow position: | chr28:16200704-16200527 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 214-398 |
| Cow position: | chr28:6301121-6301296 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 214-398 |
| Cow position: | chr28:17738113-17737938 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 215-309 |
| Cow position: | chr28:24726396-24726302 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 215-394 |
| Cow position: | chr28:8656125-8655958 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 215-394 |
| Cow position: | chr28:29500441-29500615 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 215-397 |
| Cow position: | chr28:3759031-3759208 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 217-403 |
| Cow position: | chr28:11115129-11115325 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 178 |
| Conread position: | 218-391 |
| Cow position: | chr28:11310056-11309883 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 150, 89 |
| Conread position: | 223-396 |
| Cow position: | chr28:3494404-3494571 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 230-403 |
| Cow position: | chr28:3311168-3310998 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 149, 85 |
| Conread position: | 231-400 |
| Cow position: | chr28:22278575-22278411 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 233-396 |
| Cow position: | chr28:5725089-5724930 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 67, 0 |
Show alignments to all cow chromosomes.