Cow genome map
| Conread name: | rplac_3633.y1 |
| Conread position: | 140-396 |
| Cow position: | chr29:685205-684973 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 142-305 |
| Cow position: | chr29:31981787-31981954 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 13, 159 |
| Conread position: | 142-381 |
| Cow position: | chr29:15947123-15947358 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 16, 159 |
| Conread position: | 143-396 |
| Cow position: | chr29:749947-749687 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 67, 110 |
| Conread position: | 143-396 |
| Cow position: | chr29:25474882-25475137 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 66, 9 |
| Conread position: | 143-398 |
| Cow position: | chr29:30827365-30827614 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 69, 9 |
| Conread position: | 144-387 |
| Cow position: | chr29:30440894-30441134 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 66, 8 |
| Conread position: | 144-388 |
| Cow position: | chr29:6844673-6844414 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 190 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 69, 48 |
| Conread position: | 144-396 |
| Cow position: | chr29:44684059-44684303 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 9, 53 |
| Conread position: | 144-398 |
| Cow position: | chr29:23874420-23874668 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 69, 8 |
| Conread position: | 144-398 |
| Cow position: | chr29:27858755-27858994 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 144-398 |
| Cow position: | chr29:37618264-37618514 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 56, 178 |
| Conread position: | 145-389 |
| Cow position: | chr29:33321311-33321546 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 172, 0 |
| Conread position: | 146-313 |
| Cow position: | chr29:42883997-42883825 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 67, 99 |
| Conread position: | 146-396 |
| Cow position: | chr29:36220495-36220747 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 181 |
| Conread position: | 146-399 |
| Cow position: | chr29:1933611-1933363 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 27, 176 |
| Conread position: | 147-396 |
| Cow position: | chr29:2744305-2744064 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 65, 126 |
| Conread position: | 147-397 |
| Cow position: | chr29:11042392-11042648 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 117 |
| Conread position: | 150-292 |
| Cow position: | chr29:10653307-10653443 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 150-306 |
| Cow position: | chr29:4085278-4085434 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 133 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 150-340 |
| Cow position: | chr29:25088710-25088903 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 13, 46 |
| Conread position: | 150-372 |
| Cow position: | chr29:38581939-38582150 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 43, 14 |
| Conread position: | 150-393 |
| Cow position: | chr29:20167388-20167624 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 8, 149 |
| Conread position: | 150-394 |
| Cow position: | chr29:17297101-17297340 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 172 |
| Conread position: | 150-397 |
| Cow position: | chr29:5995129-5994884 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 86, 124 |
| Conread position: | 150-399 |
| Cow position: | chr29:26602157-26602407 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 154 |
| Conread position: | 150-404 |
| Cow position: | chr29:22533923-22534175 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 38, 17 |
| Conread position: | 151-390 |
| Cow position: | chr29:38858246-38858014 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 62, 9 |
| Conread position: | 152-303 |
| Cow position: | chr29:7310644-7310795 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 61, 84 |
| Conread position: | 152-304 |
| Cow position: | chr29:13867243-13867088 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 61, 148 |
| Conread position: | 152-346 |
| Cow position: | chr29:8004955-8004760 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 168, 36 |
| Conread position: | 152-388 |
| Cow position: | chr29:7956024-7955792 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 12, 103 |
| Conread position: | 152-390 |
| Cow position: | chr29:5520518-5520286 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 61, 158 |
| Conread position: | 152-391 |
| Cow position: | chr29:22068773-22068542 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 67, 123 |
| Conread position: | 152-391 |
| Cow position: | chr29:24188098-24187864 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 59, 150 |
| Conread position: | 152-393 |
| Cow position: | chr29:40583760-40583986 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 152-394 |
| Cow position: | chr29:29057146-29057381 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 216, 142 |
| Conread position: | 152-395 |
| Cow position: | chr29:38580947-38581195 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 152-398 |
| Cow position: | chr29:16195809-16196061 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 180 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 152-398 |
| Cow position: | chr29:19250313-19250549 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 75 |
| Conread position: | 152-399 |
| Cow position: | chr29:25333491-25333235 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 61, 22 |
| Conread position: | 152-399 |
| Cow position: | chr29:27668693-27668447 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 78, 123 |
| Conread position: | 153-292 |
| Cow position: | chr29:23825638-23825784 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 153-292 |
| Cow position: | chr29:36217083-36217223 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 153-311 |
| Cow position: | chr29:847674-847512 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 153-378 |
| Cow position: | chr29:29324452-29324234 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 60, 91 |
| Conread position: | 153-390 |
| Cow position: | chr29:24292837-24293069 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 60, 7 |
| Conread position: | 153-390 |
| Cow position: | chr29:30227307-30227081 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 230, 53 |
| Conread position: | 153-391 |
| Cow position: | chr29:21645286-21645516 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 153-391 |
| Cow position: | chr29:42771615-42771852 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 139, 44 |
| Conread position: | 153-392 |
| Cow position: | chr29:26540572-26540340 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 59, 110 |
| Conread position: | 153-393 |
| Cow position: | chr29:18450167-18449937 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 17 |
| Conread position: | 153-395 |
| Cow position: | chr29:23220531-23220287 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 56, 100 |
| Conread position: | 153-398 |
| Cow position: | chr29:30367088-30366849 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 131, 61 |
| Conread position: | 153-398 |
| Cow position: | chr29:34297600-34297365 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 14 |
| Conread position: | 153-399 |
| Cow position: | chr29:8292950-8292706 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 10, 46 |
| Conread position: | 153-399 |
| Cow position: | chr29:20770315-20770551 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 60, 148 |
| Conread position: | 153-403 |
| Cow position: | chr29:8669334-8669567 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 223, 65 |
| Conread position: | 154-289 |
| Cow position: | chr29:27873573-27873709 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 56, 21 |
| Conread position: | 154-382 |
| Cow position: | chr29:2263023-2262791 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 154-382 |
| Cow position: | chr29:40994921-40994689 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 53, 70 |
| Conread position: | 154-386 |
| Cow position: | chr29:30681741-30681509 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 58, 172 |
| Conread position: | 154-389 |
| Cow position: | chr29:17222382-17222613 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 65, 145 |
| Conread position: | 154-390 |
| Cow position: | chr29:31489288-31489522 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 57, 145 |
| Conread position: | 154-390 |
| Cow position: | chr29:36357098-36357326 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 63, 164 |
| Conread position: | 154-394 |
| Cow position: | chr29:12025498-12025276 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 229, 59 |
| Conread position: | 154-394 |
| Cow position: | chr29:12680125-12680360 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 132 |
| Conread position: | 154-396 |
| Cow position: | chr29:22519158-22518917 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 60, 112 |
| Conread position: | 154-398 |
| Cow position: | chr29:26017535-26017294 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 38, 169 |
| Conread position: | 154-398 |
| Cow position: | chr29:32656402-32656642 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 50, 149 |
| Conread position: | 154-398 |
| Cow position: | chr29:35458802-35458563 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 154-399 |
| Cow position: | chr29:13028413-13028657 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 173, 0 |
| Conread position: | 154-399 |
| Cow position: | chr29:13373266-13373528 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 197 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 155-292 |
| Cow position: | chr29:28195545-28195410 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 155-306 |
| Cow position: | chr29:6286191-6286036 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 155-385 |
| Cow position: | chr29:31928958-31929179 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 89 |
| Conread position: | 155-390 |
| Cow position: | chr29:40096935-40097179 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 7, 69 |
| Conread position: | 155-396 |
| Cow position: | chr29:32799735-32799499 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 186 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 156-302 |
| Cow position: | chr29:6015095-6015246 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 144 |
| Conread position: | 156-385 |
| Cow position: | chr29:31934350-31934569 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 156-393 |
| Cow position: | chr29:40299049-40298795 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 194 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 157-313 |
| Cow position: | chr29:1220159-1219999 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 157-376 |
| Cow position: | chr29:24365925-24365713 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 95 |
| Conread position: | 157-395 |
| Cow position: | chr29:11647067-11647317 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 56, 24 |
| Conread position: | 157-399 |
| Cow position: | chr29:34832413-34832186 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 159-397 |
| Cow position: | chr29:6636059-6636283 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 74, 22 |
| Conread position: | 160-309 |
| Cow position: | chr29:28166245-28166094 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 160-311 |
| Cow position: | chr29:22723576-22723731 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 160-315 |
| Cow position: | chr29:26654071-26653910 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 51, 158 |
| Conread position: | 160-389 |
| Cow position: | chr29:12783985-12783758 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 87 |
| Conread position: | 160-390 |
| Cow position: | chr29:22690200-22690425 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 53, 144 |
| Conread position: | 160-391 |
| Cow position: | chr29:2056036-2056259 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 53, 155 |
| Conread position: | 160-391 |
| Cow position: | chr29:11397950-11397714 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 10 |
| Conread position: | 160-391 |
| Cow position: | chr29:44378439-44378208 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 71, 61 |
| Conread position: | 160-395 |
| Cow position: | chr29:39329628-39329380 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 160-404 |
| Cow position: | chr29:19909931-19910176 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 165 |
| Conread position: | 161-385 |
| Cow position: | chr29:24952664-24952880 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 57, 88 |
| Conread position: | 161-391 |
| Cow position: | chr29:11915803-11916020 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 193, 53 |
| Conread position: | 161-394 |
| Cow position: | chr29:19949285-19949507 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 19, 141 |
| Conread position: | 162-390 |
| Cow position: | chr29:11705098-11705331 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 126, 37 |
| Conread position: | 162-404 |
| Cow position: | chr29:8163850-8163615 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 47, 157 |
| Conread position: | 164-398 |
| Cow position: | chr29:30294886-30294665 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 166-385 |
| Cow position: | chr29:34760432-34760208 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 166-391 |
| Cow position: | chr29:31200239-31200474 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 166-399 |
| Cow position: | chr29:11527808-11527563 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 168-397 |
| Cow position: | chr29:19176930-19176710 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 140 |
| Conread position: | 170-397 |
| Cow position: | chr29:16200493-16200271 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 42, 151 |
| Conread position: | 170-399 |
| Cow position: | chr29:23155213-23155442 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 170-403 |
| Cow position: | chr29:35677558-35677330 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 42, 155 |
| Conread position: | 171-385 |
| Cow position: | chr29:24345242-24345017 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 172-398 |
| Cow position: | chr29:28420743-28420963 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 40, 148 |
| Conread position: | 174-399 |
| Cow position: | chr29:22175670-22175897 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 185 |
| Conread position: | 176-385 |
| Cow position: | chr29:7954976-7954771 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 109 |
| Conread position: | 185-390 |
| Cow position: | chr29:629538-629735 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 28, 138 |
| Conread position: | 185-391 |
| Cow position: | chr29:2730286-2730082 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 185-392 |
| Cow position: | chr29:18878481-18878281 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 22, 136 |
| Conread position: | 185-398 |
| Cow position: | chr29:14375881-14375673 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 186-385 |
| Cow position: | chr29:41422906-41422716 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 186-389 |
| Cow position: | chr29:4441204-4441008 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 25, 80 |
| Conread position: | 186-391 |
| Cow position: | chr29:24026697-24026901 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 9, 92 |
| Conread position: | 186-404 |
| Cow position: | chr29:9078526-9078318 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 20, 115 |
| Conread position: | 188-393 |
| Cow position: | chr29:17436754-17436948 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 58 |
| Conread position: | 188-396 |
| Cow position: | chr29:19742457-19742677 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 21, 186 |
| Conread position: | 190-379 |
| Cow position: | chr29:3590470-3590678 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 28, 49 |
| Conread position: | 190-396 |
| Cow position: | chr29:19061765-19061558 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 116, 74 |
| Conread position: | 190-398 |
| Cow position: | chr29:26211057-26211259 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 23, 100 |
| Conread position: | 192-379 |
| Cow position: | chr29:23142327-23142145 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 8, 129 |
| Conread position: | 192-404 |
| Cow position: | chr29:8799003-8798799 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 194-403 |
| Cow position: | chr29:18579826-18579608 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 198-399 |
| Cow position: | chr29:27042289-27042477 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 199-375 |
| Cow position: | chr29:33393696-33393871 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 199-389 |
| Cow position: | chr29:35737313-35737120 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 134 |
| Conread position: | 199-391 |
| Cow position: | chr29:9800668-9800858 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 199-391 |
| Cow position: | chr29:20177686-20177491 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 130 |
| Conread position: | 199-398 |
| Cow position: | chr29:25432470-25432660 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 119 |
| Conread position: | 199-402 |
| Cow position: | chr29:36059149-36058944 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 63, 7 |
| Conread position: | 200-382 |
| Cow position: | chr29:934940-935116 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 204-324 |
| Cow position: | chr29:30424776-30424656 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 207-396 |
| Cow position: | chr29:37990973-37990783 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 208-382 |
| Cow position: | chr29:22335202-22335035 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 208-394 |
| Cow position: | chr29:28949001-28949187 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 119, 12 |
| Conread position: | 209-370 |
| Cow position: | chr29:28257169-28257320 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 70, 62 |
| Conread position: | 209-381 |
| Cow position: | chr29:23819362-23819195 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 209-391 |
| Cow position: | chr29:26631069-26631248 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 209-393 |
| Cow position: | chr29:18748362-18748186 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 210-393 |
| Cow position: | chr29:19125351-19125531 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 210-399 |
| Cow position: | chr29:34600831-34600645 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 83, 18 |
| Conread position: | 214-391 |
| Cow position: | chr29:26672878-26672700 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 112, 47 |
| Conread position: | 214-392 |
| Cow position: | chr29:25907279-25907452 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 215-397 |
| Cow position: | chr29:38605041-38605230 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 13, 129 |
| Conread position: | 218-391 |
| Cow position: | chr29:16438742-16438573 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 218-396 |
| Cow position: | chr29:7040835-7040664 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 220-397 |
| Cow position: | chr29:30920364-30920195 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 223-391 |
| Cow position: | chr29:17301803-17301970 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 230-398 |
| Cow position: | chr29:24119451-24119292 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 233-399 |
| Cow position: | chr29:35281516-35281679 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 272-391 |
| Cow position: | chr29:16949003-16949117 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 95 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
Show alignments to all cow chromosomes.