Non-Coding RNA Search

Cow genome map


           Conread name:
           rplac_7362.y1
        

               Conread position:
               132-554
               

               Cow position:
               chr21:32340020-32339601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               288
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               68, 14
               

               Conread position:
               188-554
               

               Cow position:
               chr21:725125-724746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 72
               

               Conread position:
               208-547
               

               Cow position:
               chr21:35354332-35354663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               224, 7
               

               Conread position:
               209-560
               

               Cow position:
               chr21:10005090-10004741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 59
               

               Conread position:
               219-452
               

               Cow position:
               chr21:5455184-5454948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               8, 101
               

               Conread position:
               227-557
               

               Cow position:
               chr21:10633829-10633498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               38, 96
               

               Conread position:
               235-486
               

               Cow position:
               chr21:27743560-27743820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               31, 51
               

               Conread position:
               239-570
               

               Cow position:
               chr21:28211018-28211346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               238
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               26, 153
               

               Conread position:
               240-461
               

               Cow position:
               chr21:393845-394065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               25, 16
               

               Conread position:
               240-470
               

               Cow position:
               chr21:12616963-12617195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               184
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               19, 80
               

               Conread position:
               242-516
               

               Cow position:
               chr21:3381257-3380977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               243-534
               

               Cow position:
               chr21:10118379-10118678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 181
               

               Conread position:
               243-553
               

               Cow position:
               chr21:4905145-4904829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               16, 214
               

               Conread position:
               243-557
               

               Cow position:
               chr21:10514634-10514949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               244-429
               

               Cow position:
               chr21:23683377-23683560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               244-462
               

               Cow position:
               chr21:42023951-42024169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               244-472
               

               Cow position:
               chr21:42170457-42170691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               244-479
               

               Cow position:
               chr21:34053360-34053129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 42
               

               Conread position:
               244-499
               

               Cow position:
               chr21:13898018-13898272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               99, 76
               

               Conread position:
               244-507
               

               Cow position:
               chr21:6764875-6764608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               21, 46
               

               Conread position:
               244-543
               

               Cow position:
               chr21:35996998-35997300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               11, 79
               

               Conread position:
               244-548
               

               Cow position:
               chr21:8618101-8618397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               244-554
               

               Cow position:
               chr21:33548-33858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 77
               

               Conread position:
               244-554
               

               Cow position:
               chr21:5595488-5595785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 146
               

               Conread position:
               244-554
               

               Cow position:
               chr21:23535543-23535848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               244-554
               

               Cow position:
               chr21:28027630-28027935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 86
               

               Conread position:
               244-554
               

               Cow position:
               chr21:41198584-41198260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               21, 256
               

               Conread position:
               244-560
               

               Cow position:
               chr21:7564495-7564162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               244-560
               

               Cow position:
               chr21:44251999-44251698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               244-566
               

               Cow position:
               chr21:46912371-46912696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               125, 77
               

               Conread position:
               244-567
               

               Cow position:
               chr21:20262507-20262184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 73
               

               Conread position:
               244-570
               

               Cow position:
               chr21:29069502-29069171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               244-573
               

               Cow position:
               chr21:81897-82225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 199
               

               Conread position:
               245-430
               

               Cow position:
               chr21:2927376-2927189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               127, 95
               

               Conread position:
               245-449
               

               Cow position:
               chr21:48484614-48484411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               13, 61
               

               Conread position:
               245-457
               

               Cow position:
               chr21:3236359-3236567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               245-458
               

               Cow position:
               chr21:24765111-24765336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 103
               

               Conread position:
               245-511
               

               Cow position:
               chr21:12961072-12960802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 254
               

               Conread position:
               245-512
               

               Cow position:
               chr21:11706924-11706660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               21, 190
               

               Conread position:
               245-512
               

               Cow position:
               chr21:39888915-39888652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               245-531
               

               Cow position:
               chr21:24607213-24607502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               207
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               20, 175
               

               Conread position:
               245-547
               

               Cow position:
               chr21:41579578-41579888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               245-547
               

               Cow position:
               chr21:46242412-46242108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 69
               

               Conread position:
               245-553
               

               Cow position:
               chr21:22856043-22856356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 152
               

               Conread position:
               245-553
               

               Cow position:
               chr21:47764285-47763979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               245-554
               

               Cow position:
               chr21:5426773-5427079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 68
               

               Conread position:
               245-554
               

               Cow position:
               chr21:23322254-23321939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 162
               

               Conread position:
               245-557
               

               Cow position:
               chr21:3585530-3585226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               223
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               21, 67
               

               Conread position:
               245-558
               

               Cow position:
               chr21:36297306-36297636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               245-559
               

               Cow position:
               chr21:15610982-15611284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 71
               

               Conread position:
               245-560
               

               Cow position:
               chr21:34391143-34390830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 78
               

               Conread position:
               245-568
               

               Cow position:
               chr21:27569331-27569020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               245-569
               

               Cow position:
               chr21:41620948-41621278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               245-570
               

               Cow position:
               chr21:30592476-30592154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               246-405
               

               Cow position:
               chr21:28599601-28599764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-421
               

               Cow position:
               chr21:9278204-9278385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               246-430
               

               Cow position:
               chr21:42053435-42053253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-462
               

               Cow position:
               chr21:37361638-37361426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-462
               

               Cow position:
               chr21:41957345-41957128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               246-472
               

               Cow position:
               chr21:42913916-42913686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               246-502
               

               Cow position:
               chr21:28443548-28443285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               195
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-505
               

               Cow position:
               chr21:39450336-39450071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               97, 10
               

               Conread position:
               246-511
               

               Cow position:
               chr21:16612459-16612721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-518
               

               Cow position:
               chr21:47802430-47802153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-531
               

               Cow position:
               chr21:426619-426923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-542
               

               Cow position:
               chr21:4282038-4281748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               246-545
               

               Cow position:
               chr21:19766684-19766984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-545
               

               Cow position:
               chr21:40786502-40786807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               98, 145
               

               Conread position:
               246-546
               

               Cow position:
               chr21:19363634-19363328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-547
               

               Cow position:
               chr21:8235715-8235430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               246-547
               

               Cow position:
               chr21:10151624-10151937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 88
               

               Conread position:
               246-547
               

               Cow position:
               chr21:17428333-17428628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               246-547
               

               Cow position:
               chr21:22353400-22353105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               246-548
               

               Cow position:
               chr21:13488348-13488660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               246-548
               

               Cow position:
               chr21:25344707-25344994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               246-553
               

               Cow position:
               chr21:49700206-49699902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               246-554
               

               Cow position:
               chr21:1483319-1483619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-554
               

               Cow position:
               chr21:17183752-17184056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               13, 25
               

               Conread position:
               246-554
               

               Cow position:
               chr21:23586706-23587021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               246-554
               

               Cow position:
               chr21:37706577-37706276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               9, 63
               

               Conread position:
               246-554
               

               Cow position:
               chr21:44515103-44515403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               246-557
               

               Cow position:
               chr21:34159788-34160094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               19, 52
               

               Conread position:
               246-557
               

               Cow position:
               chr21:38900603-38900915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 213
               

               Conread position:
               246-557
               

               Cow position:
               chr21:45473927-45473616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               246-559
               

               Cow position:
               chr21:13365173-13365486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               246-559
               

               Cow position:
               chr21:19258656-19258962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               233
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               9, 80
               

               Conread position:
               246-559
               

               Cow position:
               chr21:39403707-39403381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               222
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               124, 96
               

               Conread position:
               246-560
               

               Cow position:
               chr21:1058906-1059220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               234
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               246-560
               

               Cow position:
               chr21:5898568-5898257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               246-560
               

               Cow position:
               chr21:6051335-6051648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               19, 94
               

               Conread position:
               246-560
               

               Cow position:
               chr21:18845185-18844867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 9
               

               Conread position:
               246-560
               

               Cow position:
               chr21:23672573-23672890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               9, 35
               

               Conread position:
               246-560
               

               Cow position:
               chr21:28989444-28989758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               97, 74
               

               Conread position:
               246-560
               

               Cow position:
               chr21:42348848-42348550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               246-560
               

               Cow position:
               chr21:42414272-42413952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               12, 159
               

               Conread position:
               246-560
               

               Cow position:
               chr21:46849293-46848983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-563
               

               Cow position:
               chr21:22860831-22861149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 74
               

               Conread position:
               246-563
               

               Cow position:
               chr21:29214319-29214012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               246-563
               

               Cow position:
               chr21:31253366-31253681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-563
               

               Cow position:
               chr21:33350572-33350889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-565
               

               Cow position:
               chr21:30849109-30848791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               9, 30
               

               Conread position:
               246-568
               

               Cow position:
               chr21:18568820-18568486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chr21:802465-802162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 64
               

               Conread position:
               246-570
               

               Cow position:
               chr21:24598491-24598813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               234
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chr21:24858141-24858470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 164
               

               Conread position:
               246-570
               

               Cow position:
               chr21:30250380-30250049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               245
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               19, 163
               

               Conread position:
               246-570
               

               Cow position:
               chr21:30990439-30990132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 63
               

               Conread position:
               246-572
               

               Cow position:
               chr21:19615003-19615332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               246-572
               

               Cow position:
               chr21:28190858-28191189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-573
               

               Cow position:
               chr21:42540390-42540063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               247-420
               

               Cow position:
               chr21:13163721-13163894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 96
               

               Conread position:
               247-519
               

               Cow position:
               chr21:17174977-17175250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               95, 65
               

               Conread position:
               247-543
               

               Cow position:
               chr21:24887839-24888127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               247-553
               

               Cow position:
               chr21:39664560-39664260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               9, 79
               

               Conread position:
               247-557
               

               Cow position:
               chr21:1591379-1591696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 9
               

               Conread position:
               247-560
               

               Cow position:
               chr21:27521497-27521195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               247-560
               

               Cow position:
               chr21:47465293-47464974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 57
               

               Conread position:
               247-565
               

               Cow position:
               chr21:33997390-33997079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               18, 69
               

               Conread position:
               247-570
               

               Cow position:
               chr21:32559526-32559210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               248-547
               

               Cow position:
               chr21:43357430-43357124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 74
               

               Conread position:
               248-569
               

               Cow position:
               chr21:4399631-4399956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               17, 7
               

               Conread position:
               250-554
               

               Cow position:
               chr21:9353274-9353586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 5
               

               Conread position:
               251-547
               

               Cow position:
               chr21:7825339-7825060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               6, 18
               

               Conread position:
               253-570
               

               Cow position:
               chr21:32297672-32297364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 160
               

               Conread position:
               254-453
               

               Cow position:
               chr21:36793729-36793931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               11, 67
               

               Conread position:
               256-523
               

               Cow position:
               chr21:2679394-2679665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 171
               

               Conread position:
               256-547
               

               Cow position:
               chr21:20152790-20153088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               257-490
               

               Cow position:
               chr21:18494808-18495046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               86, 197
               

               Conread position:
               257-545
               

               Cow position:
               chr21:11027515-11027225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               86, 218
               

               Conread position:
               257-548
               

               Cow position:
               chr21:40899179-40899472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               89, 237
               

               Conread position:
               257-554
               

               Cow position:
               chr21:12366230-12366510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               87, 61
               

               Conread position:
               257-558
               

               Cow position:
               chr21:18800686-18800391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               257-560
               

               Cow position:
               chr21:25382852-25383171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               48, 30
               

               Conread position:
               257-570
               

               Cow position:
               chr21:5392700-5392380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 102
               

               Conread position:
               257-570
               

               Cow position:
               chr21:47215338-47215040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               86, 37
               

               Conread position:
               257-573
               

               Cow position:
               chr21:27624555-27624856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 18
               

               Conread position:
               259-572
               

               Cow position:
               chr21:32237142-32237435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               111, 59
               

               Conread position:
               261-554
               

               Cow position:
               chr21:19083754-19083448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               49, 84
               

               Conread position:
               263-426
               

               Cow position:
               chr21:31511142-31511295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               263-443
               

               Cow position:
               chr21:28617439-28617618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               103, 17
               

               Conread position:
               263-459
               

               Cow position:
               chr21:48251181-48250982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               81, 105
               

               Conread position:
               263-558
               

               Cow position:
               chr21:29002313-29002010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               264-414
               

               Cow position:
               chr21:48108013-48107865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               264-426
               

               Cow position:
               chr21:8648082-8648245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               264-456
               

               Cow position:
               chr21:45375465-45375665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               49, 108
               

               Conread position:
               264-471
               

               Cow position:
               chr21:5137640-5137430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               79, 55
               

               Conread position:
               264-472
               

               Cow position:
               chr21:40058655-40058864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               264-472
               

               Cow position:
               chr21:43240708-43240922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 195
               

               Conread position:
               264-478
               

               Cow position:
               chr21:10882284-10882506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               264-485
               

               Cow position:
               chr21:17410810-17410588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 192
               

               Conread position:
               264-516
               

               Cow position:
               chr21:4189684-4189942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-516
               

               Cow position:
               chr21:21223139-21223383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               79, 143
               

               Conread position:
               264-535
               

               Cow position:
               chr21:13489492-13489766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 79
               

               Conread position:
               264-540
               

               Cow position:
               chr21:10967083-10967357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               80, 51
               

               Conread position:
               264-541
               

               Cow position:
               chr21:2367190-2367458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               264-544
               

               Cow position:
               chr21:9310895-9311181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               101, 78
               

               Conread position:
               264-545
               

               Cow position:
               chr21:6833902-6834179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               264-545
               

               Cow position:
               chr21:6910034-6909748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               80, 221
               

               Conread position:
               264-545
               

               Cow position:
               chr21:15584560-15584289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               166, 18
               

               Conread position:
               264-545
               

               Cow position:
               chr21:18289512-18289793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               170, 78
               

               Conread position:
               264-546
               

               Cow position:
               chr21:34739696-34739975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               264-547
               

               Cow position:
               chr21:24642368-24642652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               264-547
               

               Cow position:
               chr21:34010541-34010264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               264-548
               

               Cow position:
               chr21:13048347-13048060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 58
               

               Conread position:
               264-548
               

               Cow position:
               chr21:13840172-13840459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               105, 30
               

               Conread position:
               264-548
               

               Cow position:
               chr21:28477471-28477762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               101, 80
               

               Conread position:
               264-549
               

               Cow position:
               chr21:28512382-28512648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               79, 43
               

               Conread position:
               264-552
               

               Cow position:
               chr21:42384355-42384645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 190
               

               Conread position:
               264-553
               

               Cow position:
               chr21:45151773-45151491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               75, 46
               

               Conread position:
               264-554
               

               Cow position:
               chr21:11645119-11644827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 77
               

               Conread position:
               264-554
               

               Cow position:
               chr21:13585210-13584922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               45, 142
               

               Conread position:
               264-554
               

               Cow position:
               chr21:18790706-18790427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               264-554
               

               Cow position:
               chr21:27124277-27123982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 40
               

               Conread position:
               264-554
               

               Cow position:
               chr21:30231852-30231555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               79, 169
               

               Conread position:
               264-557
               

               Cow position:
               chr21:4795075-4795362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               264-557
               

               Cow position:
               chr21:30607238-30606944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               214
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               103, 64
               

               Conread position:
               264-557
               

               Cow position:
               chr21:41974529-41974236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 194
               

               Conread position:
               264-557
               

               Cow position:
               chr21:46607734-46607448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 35
               

               Conread position:
               264-560
               

               Cow position:
               chr21:15911250-15911545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               264-560
               

               Cow position:
               chr21:15976491-15976777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               264-560
               

               Cow position:
               chr21:23801272-23800983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               165, 54
               

               Conread position:
               264-560
               

               Cow position:
               chr21:36795453-36795748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               166, 62
               

               Conread position:
               264-560
               

               Cow position:
               chr21:38449602-38449304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 259
               

               Conread position:
               264-560
               

               Cow position:
               chr21:40589633-40589337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               79, 105
               

               Conread position:
               264-560
               

               Cow position:
               chr21:41878326-41878614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               79, 25
               

               Conread position:
               264-560
               

               Cow position:
               chr21:45921209-45920913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-560
               

               Cow position:
               chr21:46143793-46144104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               264-563
               

               Cow position:
               chr21:42135774-42135468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-566
               

               Cow position:
               chr21:47760625-47760919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               80, 105
               

               Conread position:
               264-568
               

               Cow position:
               chr21:641434-641740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 27
               

               Conread position:
               264-570
               

               Cow position:
               chr21:643183-643479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 54
               

               Conread position:
               264-570
               

               Cow position:
               chr21:7582060-7581750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-570
               

               Cow position:
               chr21:29484833-29485133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 62
               

               Conread position:
               264-570
               

               Cow position:
               chr21:31691328-31691637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 199
               

               Conread position:
               264-570
               

               Cow position:
               chr21:33210048-33210343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 168
               

               Conread position:
               264-570
               

               Cow position:
               chr21:33263700-33263999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               78, 31
               

               Conread position:
               264-570
               

               Cow position:
               chr21:37299317-37299617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               264-570
               

               Cow position:
               chr21:38120957-38121256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 64
               

               Conread position:
               264-570
               

               Cow position:
               chr21:45330758-45330452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               79, 193
               

               Conread position:
               264-580
               

               Cow position:
               chr21:39401444-39401755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               265-488
               

               Cow position:
               chr21:2785929-2785703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               78, 156
               

               Conread position:
               265-509
               

               Cow position:
               chr21:41455100-41454854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               80, 109
               

               Conread position:
               265-512
               

               Cow position:
               chr21:5344506-5344763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               105, 9
               

               Conread position:
               265-517
               

               Cow position:
               chr21:11639870-11640123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 27
               

               Conread position:
               265-545
               

               Cow position:
               chr21:19196316-19196034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               78, 264
               

               Conread position:
               265-560
               

               Cow position:
               chr21:20160534-20160821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               78, 44
               

               Conread position:
               265-568
               

               Cow position:
               chr21:48176677-48176973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               185, 75
               

               Conread position:
               265-570
               

               Cow position:
               chr21:6713674-6713368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               11, 34
               

               Conread position:
               265-570
               

               Cow position:
               chr21:33982958-33982655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 103
               

               Conread position:
               265-570
               

               Cow position:
               chr21:41590706-41590410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 75
               

               Conread position:
               266-545
               

               Cow position:
               chr21:28429301-28429574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               171, 54
               

               Conread position:
               266-547
               

               Cow position:
               chr21:37345250-37344969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               266-552
               

               Cow position:
               chr21:23822019-23822292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               81, 49
               

               Conread position:
               266-560
               

               Cow position:
               chr21:9416094-9416396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               266-569
               

               Cow position:
               chr21:37479808-37480119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 67
               

               Conread position:
               266-570
               

               Cow position:
               chr21:11740279-11739965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 126
               

               Conread position:
               266-570
               

               Cow position:
               chr21:28734060-28733758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               77, 62
               

               Conread position:
               267-499
               

               Cow position:
               chr21:14515700-14515925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               63, 10
               

               Conread position:
               268-510
               

               Cow position:
               chr21:18041989-18041752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               268-570
               

               Cow position:
               chr21:34653935-34654228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 40
               

               Conread position:
               269-507
               

               Cow position:
               chr21:20925652-20925411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               73, 49
               

               Conread position:
               269-539
               

               Cow position:
               chr21:5636866-5636596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               202
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               74, 46
               

               Conread position:
               269-547
               

               Cow position:
               chr21:957521-957804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 123
               

               Conread position:
               269-563
               

               Cow position:
               chr21:27229940-27229646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 49
               

               Conread position:
               271-532
               

               Cow position:
               chr21:23192661-23192392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               271-569
               

               Cow position:
               chr21:42007603-42007309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               93, 39
               

               Conread position:
               272-568
               

               Cow position:
               chr21:23568071-23568381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               273-545
               

               Cow position:
               chr21:9301067-9301353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               273-560
               

               Cow position:
               chr21:29978903-29978615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               212
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               45, 6
               

               Conread position:
               274-557
               

               Cow position:
               chr21:11250725-11251011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               67, 174
               

               Conread position:
               274-573
               

               Cow position:
               chr21:48234299-48234007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               70, 33
               

               Conread position:
               275-453
               

               Cow position:
               chr21:13954374-13954554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               275-465
               

               Cow position:
               chr21:2495313-2495123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               68, 177
               

               Conread position:
               276-450
               

               Cow position:
               chr21:1196729-1196905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-450
               

               Cow position:
               chr21:17145010-17145186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-450
               

               Cow position:
               chr21:17300244-17300422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-450
               

               Cow position:
               chr21:23899945-23899769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-453
               

               Cow position:
               chr21:43271992-43271811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-462
               

               Cow position:
               chr21:41209487-41209301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 178
               

               Conread position:
               276-468
               

               Cow position:
               chr21:28259859-28260052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               89, 68
               

               Conread position:
               276-469
               

               Cow position:
               chr21:2525968-2526162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               64, 164
               

               Conread position:
               276-510
               

               Cow position:
               chr21:39821948-39821713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               68, 203
               

               Conread position:
               276-515
               

               Cow position:
               chr21:40108127-40107885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               157
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-532
               

               Cow position:
               chr21:4897791-4897532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               67, 252
               

               Conread position:
               276-532
               

               Cow position:
               chr21:30965751-30965492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-539
               

               Cow position:
               chr21:4267488-4267223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-539
               

               Cow position:
               chr21:33235660-33235928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               68, 254
               

               Conread position:
               276-539
               

               Cow position:
               chr21:34910053-34910319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-545
               

               Cow position:
               chr21:7666839-7667111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               72, 190
               

               Conread position:
               276-545
               

               Cow position:
               chr21:12462109-12461837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 43
               

               Conread position:
               276-545
               

               Cow position:
               chr21:19412157-19411885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-545
               

               Cow position:
               chr21:21652330-21652601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               276-545
               

               Cow position:
               chr21:24136779-24137051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chr21:37924379-37924651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               276-545
               

               Cow position:
               chr21:48531624-48531904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               276-547
               

               Cow position:
               chr21:11359899-11360167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 67
               

               Conread position:
               276-554
               

               Cow position:
               chr21:28923978-28924248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               94, 42
               

               Conread position:
               276-563
               

               Cow position:
               chr21:34074829-34075120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-573
               

               Cow position:
               chr21:1558488-1558788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 180
               

               Conread position:
               276-573
               

               Cow position:
               chr21:30570888-30570587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               277-479
               

               Cow position:
               chr21:39809762-39809958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               153, 41
               

               Conread position:
               277-523
               

               Cow position:
               chr21:44733299-44733065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               66, 89
               

               Conread position:
               277-544
               

               Cow position:
               chr21:41951435-41951166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 199
               

               Conread position:
               278-458
               

               Cow position:
               chr21:21785223-21785042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               278-539
               

               Cow position:
               chr21:46166692-46166956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               66, 250
               

               Conread position:
               278-545
               

               Cow position:
               chr21:17875332-17875063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               65, 161
               

               Conread position:
               278-545
               

               Cow position:
               chr21:34301779-34302052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               66, 181
               

               Conread position:
               278-570
               

               Cow position:
               chr21:12723020-12723306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 113
               

               Conread position:
               279-485
               

               Cow position:
               chr21:4568149-4568355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               279-492
               

               Cow position:
               chr21:35569512-35569307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               279-509
               

               Cow position:
               chr21:45866796-45867028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 55
               

               Conread position:
               279-539
               

               Cow position:
               chr21:17856408-17856668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 89
               

               Conread position:
               279-570
               

               Cow position:
               chr21:9990377-9990665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 112
               

               Conread position:
               279-585
               

               Cow position:
               chr21:20260456-20260146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 27
               

               Conread position:
               281-560
               

               Cow position:
               chr21:20192770-20193039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               149, 6
               

               Conread position:
               285-472
               

               Cow position:
               chr21:16481575-16481386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               286-545
               

               Cow position:
               chr21:42558965-42559222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               57, 166
               

               Conread position:
               286-547
               

               Cow position:
               chr21:17696993-17696731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               57, 73
               

               Conread position:
               286-548
               

               Cow position:
               chr21:19369475-19369214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               286-560
               

               Cow position:
               chr21:45355708-45355978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               57, 42
               

               Conread position:
               286-569
               

               Cow position:
               chr21:12301632-12301358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               179, 54
               

               Conread position:
               287-560
               

               Cow position:
               chr21:46911-47185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               129, 51
               

               Conread position:
               288-570
               

               Cow position:
               chr21:27810278-27810542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               210
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               55, 141
               

               Conread position:
               289-494
               

               Cow position:
               chr21:21077197-21077405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               54, 171
               

               Conread position:
               289-569
               

               Cow position:
               chr21:14452111-14452387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 29
               

               Conread position:
               291-568
               

               Cow position:
               chr21:30222218-30222498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 110
               

               Conread position:
               293-549
               

               Cow position:
               chr21:42096943-42097209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               294-465
               

               Cow position:
               chr21:27607483-27607312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               49, 158
               

               Conread position:
               294-563
               

               Cow position:
               chr21:22783831-22784101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               50, 199
               

               Conread position:
               295-548
               

               Cow position:
               chr21:18155693-18155433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               295-554
               

               Cow position:
               chr21:18818396-18818136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 29
               

               Conread position:
               295-557
               

               Cow position:
               chr21:30835245-30835505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               296-545
               

               Cow position:
               chr21:23980305-23980052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               16, 160
               

               Conread position:
               296-552
               

               Cow position:
               chr21:18414932-18415189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               47, 22
               

               Conread position:
               297-543
               

               Cow position:
               chr21:19174586-19174835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               46, 187
               

               Conread position:
               297-546
               

               Cow position:
               chr21:20418806-20418551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               299-554
               

               Cow position:
               chr21:25629027-25628771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               70, 44
               

               Conread position:
               299-560
               

               Cow position:
               chr21:2657704-2657954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               148, 29
               

               Conread position:
               300-559
               

               Cow position:
               chr21:36789679-36789939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 69
               

               Conread position:
               304-560
               

               Cow position:
               chr21:10410103-10410367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               14, 39
               

               Conread position:
               305-539
               

               Cow position:
               chr21:19170020-19169784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 188
               

               Conread position:
               305-545
               

               Cow position:
               chr21:12916539-12916291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 157
               

               Conread position:
               307-560
               

               Cow position:
               chr21:13089580-13089329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 96
               

               Conread position:
               308-521
               

               Cow position:
               chr21:9360335-9360541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 60
               

               Conread position:
               308-553
               

               Cow position:
               chr21:9698193-9697942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 19
               

               Conread position:
               309-545
               

               Cow position:
               chr21:10601483-10601245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               189
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               310-569
               

               Cow position:
               chr21:395762-396020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 116
               

               Conread position:
               311-545
               

               Cow position:
               chr21:17560037-17559793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               311-546
               

               Cow position:
               chr21:10673024-10673252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               32, 50
               

               Conread position:
               312-548
               

               Cow position:
               chr21:37790110-37789866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               9, 46
               

               Conread position:
               312-572
               

               Cow position:
               chr21:16914669-16914934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 165
               

               Conread position:
               313-580
               

               Cow position:
               chr21:19400618-19400349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               31, 131
               

               Conread position:
               314-565
               

               Cow position:
               chr21:33414187-33413938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               116, 30
               

               Conread position:
               318-570
               

               Cow position:
               chr21:18850326-18850069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               112, 25
               

               Conread position:
               319-528
               

               Cow position:
               chr21:2904572-2904365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               22, 73
               

               Conread position:
               319-543
               

               Cow position:
               chr21:8206673-8206900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               24, 54
               

               Conread position:
               320-554
               

               Cow position:
               chr21:3818109-3818348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               23, 137
               

               Conread position:
               320-560
               

               Cow position:
               chr21:10561682-10561438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               23, 144
               

               Conread position:
               321-552
               

               Cow position:
               chr21:6017519-6017763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               321-554
               

               Cow position:
               chr21:17008884-17009120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               321-554
               

               Cow position:
               chr21:42022193-42022414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               22, 64
               

               Conread position:
               324-560
               

               Cow position:
               chr21:9940288-9940043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               325-544
               

               Cow position:
               chr21:45906714-45906493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 134
               

               Conread position:
               326-545
               

               Cow position:
               chr21:46552198-46551973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               326-573
               

               Cow position:
               chr21:6997846-6998105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               327-573
               

               Cow position:
               chr21:31090511-31090277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               16, 81
               

               Conread position:
               328-521
               

               Cow position:
               chr21:37014493-37014300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               15, 126
               

               Conread position:
               330-557
               

               Cow position:
               chr21:22210332-22210104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               13, 103
               

               Conread position:
               330-570
               

               Cow position:
               chr21:45262899-45262655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 87
               

               Conread position:
               340-560
               

               Cow position:
               chr21:47719376-47719157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               92, 49
               

               Conread position:
               342-512
               

               Cow position:
               chr21:33360109-33359940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               28, 106
               

               Conread position:
               342-554
               

               Cow position:
               chr21:9036220-9036440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               148
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               342-569
               

               Cow position:
               chr21:36909859-36910084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               22, 99
               

               Conread position:
               342-570
               

               Cow position:
               chr21:4280747-4280520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               84, 59
               

               Conread position:
               343-554
               

               Cow position:
               chr21:46140967-46141187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               26, 121
               

               Conread position:
               344-570
               

               Cow position:
               chr21:16569828-16570055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               85, 98
               

               Conread position:
               345-557
               

               Cow position:
               chr21:15544290-15544087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               105, 92
               

               Conread position:
               345-560
               

               Cow position:
               chr21:1511219-1511434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               84, 173
               

               Conread position:
               347-544
               

               Cow position:
               chr21:40432379-40432574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               350-570
               

               Cow position:
               chr21:44214057-44214281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               79, 171
               

               Conread position:
               353-515
               

               Cow position:
               chr21:12339575-12339741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               354-567
               

               Cow position:
               chr21:297689-297906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               167
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               5, 49
               

               Conread position:
               355-560
               

               Cow position:
               chr21:8426379-8426591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               35, 108
               

               Conread position:
               356-563
               

               Cow position:
               chr21:8349267-8349476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               75, 166
               

               Conread position:
               358-545
               

               Cow position:
               chr21:18060016-18059831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 50
               

               Conread position:
               358-545
               

               Cow position:
               chr21:28919582-28919393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               131
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               72, 10
               

               Conread position:
               359-570
               

               Cow position:
               chr21:35899786-35899996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               360-574
               

               Cow position:
               chr21:868982-868766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               69, 210
               

               Conread position:
               362-548
               

               Cow position:
               chr21:9302482-9302294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 115
               

               Conread position:
               363-523
               

               Cow position:
               chr21:41598064-41598227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               67, 152
               

               Conread position:
               363-547
               

               Cow position:
               chr21:22014133-22014322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               363-553
               

               Cow position:
               chr21:47363792-47363596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               67, 95
               

               Conread position:
               363-554
               

               Cow position:
               chr21:17890249-17890441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               67, 95
               

               Conread position:
               363-580
               

               Cow position:
               chr21:5464693-5464915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               62, 132
               

               Conread position:
               363-585
               

               Cow position:
               chr21:977198-976978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               368-554
               

               Cow position:
               chr21:19060136-19059954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               374-570
               

               Cow position:
               chr21:71540-71741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               21, 188
               

               Conread position:
               374-570
               

               Cow position:
               chr21:742245-742432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               58, 21
               

               Conread position:
               388-577
               

               Cow position:
               chr21:12104342-12104528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               126, 25
               

               Conread position:
               390-560
               

               Cow position:
               chr21:42209658-42209484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               392-570
               

               Cow position:
               chr21:28030263-28030443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               38, 133
               

               Conread position:
               394-557
               

               Cow position:
               chr21:37235362-37235527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               401-563
               

               Cow position:
               chr21:47160201-47160366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               119
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               401-570
               

               Cow position:
               chr21:829226-829054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               408-549
               

               Cow position:
               chr21:674675-674819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               408-570
               

               Cow position:
               chr21:30980587-30980423 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 113
               

               Conread position:
               414-570
               

               Cow position:
               chr21:19240880-19240718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               415-559
               

               Cow position:
               chr21:28599887-28600030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               415-560
               

               Cow position:
               chr21:46599357-46599506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               429-560
               

               Cow position:
               chr21:19360162-19360031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               429-570
               

               Cow position:
               chr21:36682336-36682480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               436-573
               

               Cow position:
               chr21:21615805-21615940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               102
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               445-570
               

               Cow position:
               chr21:46451922-46451799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               96
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               36, 0
               
Show alignments to all cow chromosomes.
Conread position:	132-554
Cow position:	chr21:32340020-32339601 (view UCSC Genome Browser custom track)
Alignm length:	433
Alignm identity:	288
Alignm E-value:	6e-40
Alignm gaps (pig, cow):	68, 14
Conread position:	188-554
Cow position:	chr21:725125-724746 (view UCSC Genome Browser custom track)
Alignm length:	382
Alignm identity:	291
Alignm E-value:	0
Alignm gaps (pig, cow):	39, 72
Conread position:	208-547
Cow position:	chr21:35354332-35354663 (view UCSC Genome Browser custom track)
Alignm length:	343
Alignm identity:	208
Alignm E-value:	2e-38
Alignm gaps (pig, cow):	224, 7
Conread position:	209-560
Cow position:	chr21:10005090-10004741 (view UCSC Genome Browser custom track)
Alignm length:	356
Alignm identity:	226
Alignm E-value:	0
Alignm gaps (pig, cow):	221, 59
Conread position:	219-452
Cow position:	chr21:5455184-5454948 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	172
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	8, 101
Conread position:	227-557
Cow position:	chr21:10633829-10633498 (view UCSC Genome Browser custom track)
Alignm length:	339
Alignm identity:	235
Alignm E-value:	8.00001e-42
Alignm gaps (pig, cow):	38, 96
Conread position:	235-486
Cow position:	chr21:27743560-27743820 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	189
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	31, 51
Conread position:	239-570
Cow position:	chr21:28211018-28211346 (view UCSC Genome Browser custom track)
Alignm length:	340
Alignm identity:	238
Alignm E-value:	7.00005e-41
Alignm gaps (pig, cow):	26, 153
Conread position:	240-461
Cow position:	chr21:393845-394065 (view UCSC Genome Browser custom track)
Alignm length:	229
Alignm identity:	177
Alignm E-value:	6e-40
Alignm gaps (pig, cow):	25, 16
Conread position:	240-470
Cow position:	chr21:12616963-12617195 (view UCSC Genome Browser custom track)
Alignm length:	239
Alignm identity:	184
Alignm E-value:	8.99634e-43
Alignm gaps (pig, cow):	19, 80
Conread position:	242-516
Cow position:	chr21:3381257-3380977 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	199
Alignm E-value:	3e-31
Alignm gaps (pig, cow):	23, 79
Conread position:	243-534
Cow position:	chr21:10118379-10118678 (view UCSC Genome Browser custom track)
Alignm length:	302
Alignm identity:	202
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	22, 181
Conread position:	243-553
Cow position:	chr21:4905145-4904829 (view UCSC Genome Browser custom track)
Alignm length:	320
Alignm identity:	210
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	16, 214
Conread position:	243-557
Cow position:	chr21:10514634-10514949 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	215
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	22, 11
Conread position:	244-429
Cow position:	chr21:23683377-23683560 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	143
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	21, 52
Conread position:	244-462
Cow position:	chr21:42023951-42024169 (view UCSC Genome Browser custom track)
Alignm length:	224
Alignm identity:	166
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	21, 77
Conread position:	244-472
Cow position:	chr21:42170457-42170691 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	157
Alignm E-value:	3e-23
Alignm gaps (pig, cow):	11, 0
Conread position:	244-479
Cow position:	chr21:34053360-34053129 (view UCSC Genome Browser custom track)
Alignm length:	241
Alignm identity:	163
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	21, 42
Conread position:	244-499
Cow position:	chr21:13898018-13898272 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	180
Alignm E-value:	5e-27
Alignm gaps (pig, cow):	99, 76
Conread position:	244-507
Cow position:	chr21:6764875-6764608 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	193
Alignm E-value:	1e-35
Alignm gaps (pig, cow):	21, 46