Non-Coding RNA Search

Cow genome map


           Conread name:
           rplac_7362.y1
        

               Conread position:
               199-545
               

               Cow position:
               chr5:3242727-3242389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 28
               

               Conread position:
               199-573
               

               Cow position:
               chr5:30276433-30276810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 241
               

               Conread position:
               200-547
               

               Cow position:
               chr5:458229-458582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               221-510
               

               Cow position:
               chr5:35235943-35235652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               228-548
               

               Cow position:
               chr5:48154700-48154370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               36, 68
               

               Conread position:
               238-554
               

               Cow position:
               chr5:50215775-50215461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               26, 44
               

               Conread position:
               238-572
               

               Cow position:
               chr5:30629367-30629037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 5
               

               Conread position:
               239-554
               

               Cow position:
               chr5:51053863-51053548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               240-548
               

               Cow position:
               chr5:29212733-29213033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               215
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               25, 74
               

               Conread position:
               241-547
               

               Cow position:
               chr5:40388080-40387786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               241-554
               

               Cow position:
               chr5:11427455-11427132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               241-560
               

               Cow position:
               chr5:43992112-43992431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               133, 14
               

               Conread position:
               241-568
               

               Cow position:
               chr5:66257429-66257751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               242-537
               

               Cow position:
               chr5:40357082-40356762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               243-548
               

               Cow position:
               chr5:5201704-5201996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               244-428
               

               Cow position:
               chr5:1105082-1104890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               21, 184
               

               Conread position:
               244-450
               

               Cow position:
               chr5:9070700-9070500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               244-502
               

               Cow position:
               chr5:4797522-4797274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               9, 78
               

               Conread position:
               244-521
               

               Cow position:
               chr5:20554960-20554686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               244-533
               

               Cow position:
               chr5:28926396-28926100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               244-545
               

               Cow position:
               chr5:36868534-36868829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               22, 77
               

               Conread position:
               244-548
               

               Cow position:
               chr5:23140784-23140494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               244-548
               

               Cow position:
               chr5:28330543-28330248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               244-548
               

               Cow position:
               chr5:32153527-32153224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               215
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               22, 96
               

               Conread position:
               244-548
               

               Cow position:
               chr5:40889495-40889202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               244-548
               

               Cow position:
               chr5:68871981-68872288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               22, 33
               

               Conread position:
               244-554
               

               Cow position:
               chr5:3281620-3281936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               21, 147
               

               Conread position:
               244-554
               

               Cow position:
               chr5:31469794-31469492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               222
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               21, 75
               

               Conread position:
               244-554
               

               Cow position:
               chr5:34184006-34184324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               12, 222
               

               Conread position:
               244-554
               

               Cow position:
               chr5:44049492-44049799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               244-554
               

               Cow position:
               chr5:61576328-61576646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               244-569
               

               Cow position:
               chr5:24348900-24349222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 79
               

               Conread position:
               244-570
               

               Cow position:
               chr5:20407874-20407561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               244-570
               

               Cow position:
               chr5:58793826-58793490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 102
               

               Conread position:
               245-457
               

               Cow position:
               chr5:1276686-1276459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               245-475
               

               Cow position:
               chr5:45036811-45037044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               245-504
               

               Cow position:
               chr5:62826964-62826701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               245-512
               

               Cow position:
               chr5:32975762-32975494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               20, 100
               

               Conread position:
               245-526
               

               Cow position:
               chr5:30487037-30487315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               121, 38
               

               Conread position:
               245-536
               

               Cow position:
               chr5:47313264-47313556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               10, 58
               

               Conread position:
               245-544
               

               Cow position:
               chr5:46122560-46122262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               14, 58
               

               Conread position:
               245-545
               

               Cow position:
               chr5:64137041-64137348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               245-553
               

               Cow position:
               chr5:20779591-20779298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               245-554
               

               Cow position:
               chr5:51151573-51151253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               17, 205
               

               Conread position:
               245-556
               

               Cow position:
               chr5:26990182-26990493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 95
               

               Conread position:
               245-557
               

               Cow position:
               chr5:29353337-29353021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               185, 38
               

               Conread position:
               245-557
               

               Cow position:
               chr5:44796929-44796629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               20, 73
               

               Conread position:
               245-560
               

               Cow position:
               chr5:64758970-64758660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               119, 14
               

               Conread position:
               245-570
               

               Cow position:
               chr5:19813423-19813103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               232
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               245-570
               

               Cow position:
               chr5:20783417-20783739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               233
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               98, 73
               

               Conread position:
               245-570
               

               Cow position:
               chr5:30253534-30253858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 73
               

               Conread position:
               245-570
               

               Cow position:
               chr5:56523963-56524291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 44
               

               Conread position:
               246-411
               

               Cow position:
               chr5:24642930-24642770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-435
               

               Cow position:
               chr5:33467249-33467062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               21, 9
               

               Conread position:
               246-444
               

               Cow position:
               chr5:60519958-60520155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               9, 63
               

               Conread position:
               246-449
               

               Cow position:
               chr5:65933136-65932930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-454
               

               Cow position:
               chr5:3491993-3492197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-455
               

               Cow position:
               chr5:35145143-35145354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               246-488
               

               Cow position:
               chr5:73252888-73253130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-499
               

               Cow position:
               chr5:37714114-37713848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               19, 144
               

               Conread position:
               246-501
               

               Cow position:
               chr5:6086768-6086512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               195
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 202
               

               Conread position:
               246-502
               

               Cow position:
               chr5:34115454-34115702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-508
               

               Cow position:
               chr5:65924908-65924633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               20, 47
               

               Conread position:
               246-512
               

               Cow position:
               chr5:58144812-58144544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               246-516
               

               Cow position:
               chr5:40928181-40927923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-518
               

               Cow position:
               chr5:43474640-43474910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               246-531
               

               Cow position:
               chr5:27154814-27155095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               246-539
               

               Cow position:
               chr5:16938216-16937936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-539
               

               Cow position:
               chr5:41951292-41951010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               12, 77
               

               Conread position:
               246-542
               

               Cow position:
               chr5:72172815-72173116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-545
               

               Cow position:
               chr5:17063301-17062989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               246-545
               

               Cow position:
               chr5:37646759-37646451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-545
               

               Cow position:
               chr5:40039977-40039674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 95
               

               Conread position:
               246-546
               

               Cow position:
               chr5:34638677-34638976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               246-547
               

               Cow position:
               chr5:16508887-16509200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-547
               

               Cow position:
               chr5:49685489-49685177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               13, 97
               

               Conread position:
               246-547
               

               Cow position:
               chr5:56820468-56820170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-552
               

               Cow position:
               chr5:52165391-52165079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 293
               

               Conread position:
               246-554
               

               Cow position:
               chr5:8024400-8024099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               13, 62
               

               Conread position:
               246-554
               

               Cow position:
               chr5:60715563-60715267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-554
               

               Cow position:
               chr5:61839981-61840289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               246-557
               

               Cow position:
               chr5:44848225-44847917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               246-557
               

               Cow position:
               chr5:71454802-71454508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               19, 73
               

               Conread position:
               246-559
               

               Cow position:
               chr5:32697022-32696717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 58
               

               Conread position:
               246-559
               

               Cow position:
               chr5:45226032-45225711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-560
               

               Cow position:
               chr5:15478905-15479233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-560
               

               Cow position:
               chr5:16025670-16025361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               223
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               19, 185
               

               Conread position:
               246-560
               

               Cow position:
               chr5:35969334-35969639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               246-560
               

               Cow position:
               chr5:58855895-58856209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 10
               

               Conread position:
               246-563
               

               Cow position:
               chr5:28302948-28302633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-565
               

               Cow position:
               chr5:11229882-11229559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 211
               

               Conread position:
               246-568
               

               Cow position:
               chr5:26377875-26377552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-569
               

               Cow position:
               chr5:52645284-52644965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-569
               

               Cow position:
               chr5:54350569-54350246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-569
               

               Cow position:
               chr5:67932670-67932357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 49
               

               Conread position:
               246-570
               

               Cow position:
               chr5:15426320-15426655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 10
               

               Conread position:
               246-570
               

               Cow position:
               chr5:15598442-15598121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chr5:15722262-15721957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               12, 54
               

               Conread position:
               246-570
               

               Cow position:
               chr5:16893985-16893654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 146
               

               Conread position:
               246-570
               

               Cow position:
               chr5:17087237-17086904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 185
               

               Conread position:
               246-570
               

               Cow position:
               chr5:21828656-21828984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chr5:24996433-24996106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 59
               

               Conread position:
               246-570
               

               Cow position:
               chr5:26467412-26467745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 277
               

               Conread position:
               246-570
               

               Cow position:
               chr5:30302690-30303008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 9
               

               Conread position:
               246-570
               

               Cow position:
               chr5:35826384-35826719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               246-570
               

               Cow position:
               chr5:40109293-40109609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chr5:47601610-47601929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 61
               

               Conread position:
               246-570
               

               Cow position:
               chr5:55967091-55966763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chr5:56070645-56070976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               246-570
               

               Cow position:
               chr5:63992371-63992055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chr5:64139354-64139677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 189
               

               Conread position:
               246-570
               

               Cow position:
               chr5:74643870-74643561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               9, 55
               

               Conread position:
               246-572
               

               Cow position:
               chr5:17999703-17999377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-573
               

               Cow position:
               chr5:63964381-63964046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               247-446
               

               Cow position:
               chr5:56433591-56433799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               247-519
               

               Cow position:
               chr5:32378662-32378912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               12, 66
               

               Conread position:
               247-542
               

               Cow position:
               chr5:35209682-35209386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               130, 93
               

               Conread position:
               247-560
               

               Cow position:
               chr5:44752519-44752200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               18, 74
               

               Conread position:
               248-572
               

               Cow position:
               chr5:31640221-31640544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 124
               

               Conread position:
               249-451
               

               Cow position:
               chr5:39710630-39710841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 149
               

               Conread position:
               249-516
               

               Cow position:
               chr5:21964083-21964352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               94, 15
               

               Conread position:
               250-559
               

               Cow position:
               chr5:65588502-65588805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 73
               

               Conread position:
               251-546
               

               Cow position:
               chr5:63647676-63647384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               114, 51
               

               Conread position:
               252-560
               

               Cow position:
               chr5:39333743-39333424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               213
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               15, 53
               

               Conread position:
               254-554
               

               Cow position:
               chr5:12149347-12149647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               176, 64
               

               Conread position:
               256-553
               

               Cow position:
               chr5:47704330-47704026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               88, 206
               

               Conread position:
               257-428
               

               Cow position:
               chr5:46104131-46103967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               257-433
               

               Cow position:
               chr5:71158459-71158283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               112, 135
               

               Conread position:
               257-546
               

               Cow position:
               chr5:9390340-9390646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               257-554
               

               Cow position:
               chr5:68265159-68264857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 134
               

               Conread position:
               257-557
               

               Cow position:
               chr5:62142475-62142780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 63
               

               Conread position:
               257-560
               

               Cow position:
               chr5:56518405-56518115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               86, 61
               

               Conread position:
               257-570
               

               Cow position:
               chr5:34561813-34562134 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               257-573
               

               Cow position:
               chr5:69731322-69731620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               179, 54
               

               Conread position:
               259-571
               

               Cow position:
               chr5:38838252-38837937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 229
               

               Conread position:
               262-573
               

               Cow position:
               chr5:57575576-57575893 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 6
               

               Conread position:
               263-502
               

               Cow position:
               chr5:60126184-60126422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               187
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 52
               

               Conread position:
               264-421
               

               Cow position:
               chr5:50870353-50870512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-428
               

               Cow position:
               chr5:12672215-12672057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               264-440
               

               Cow position:
               chr5:30816527-30816707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               79, 89
               

               Conread position:
               264-441
               

               Cow position:
               chr5:57706727-57706906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               264-453
               

               Cow position:
               chr5:55821178-55821376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               100, 73
               

               Conread position:
               264-467
               

               Cow position:
               chr5:31434077-31434275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-469
               

               Cow position:
               chr5:49558979-49559183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               161
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               264-472
               

               Cow position:
               chr5:62995657-62995866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               79, 16
               

               Conread position:
               264-472
               

               Cow position:
               chr5:64392966-64393175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               264-485
               

               Cow position:
               chr5:58460593-58460365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               165
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               31, 190
               

               Conread position:
               264-486
               

               Cow position:
               chr5:34288658-34288435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               176
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               167, 29
               

               Conread position:
               264-492
               

               Cow position:
               chr5:51490942-51490725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               162
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               79, 11
               

               Conread position:
               264-495
               

               Cow position:
               chr5:34915953-34916173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               264-503
               

               Cow position:
               chr5:42777576-42777815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               101, 73
               

               Conread position:
               264-506
               

               Cow position:
               chr5:1027880-1027641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               103, 32
               

               Conread position:
               264-516
               

               Cow position:
               chr5:2500377-2500116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               264-520
               

               Cow position:
               chr5:59873594-59873339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               101, 38
               

               Conread position:
               264-521
               

               Cow position:
               chr5:35449065-35449304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-545
               

               Cow position:
               chr5:9090212-9089931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 188
               

               Conread position:
               264-545
               

               Cow position:
               chr5:12873556-12873843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               166, 16
               

               Conread position:
               264-545
               

               Cow position:
               chr5:26370510-26370775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               105, 15
               

               Conread position:
               264-545
               

               Cow position:
               chr5:34528373-34528639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-545
               

               Cow position:
               chr5:50483050-50482768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               101, 61
               

               Conread position:
               264-546
               

               Cow position:
               chr5:34441980-34441687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               264-547
               

               Cow position:
               chr5:5111265-5110980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 79
               

               Conread position:
               264-548
               

               Cow position:
               chr5:33080977-33080697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 38
               

               Conread position:
               264-548
               

               Cow position:
               chr5:45409137-45409418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               11, 55
               

               Conread position:
               264-552
               

               Cow position:
               chr5:34887387-34887096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               25, 62
               

               Conread position:
               264-553
               

               Cow position:
               chr5:8163012-8162717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               198
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               48, 101
               

               Conread position:
               264-554
               

               Cow position:
               chr5:26094358-26094065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               111, 74
               

               Conread position:
               264-554
               

               Cow position:
               chr5:29827865-29828148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               23, 18
               

               Conread position:
               264-554
               

               Cow position:
               chr5:33414596-33414310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               105, 19
               

               Conread position:
               264-554
               

               Cow position:
               chr5:42064014-42064306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               102, 43
               

               Conread position:
               264-554
               

               Cow position:
               chr5:54311145-54311437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               79, 10
               

               Conread position:
               264-554
               

               Cow position:
               chr5:57591502-57591789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               80, 128
               

               Conread position:
               264-557
               

               Cow position:
               chr5:20127866-20128157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               79, 15
               

               Conread position:
               264-557
               

               Cow position:
               chr5:21040162-21039879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               56, 46
               

               Conread position:
               264-557
               

               Cow position:
               chr5:37645885-37646185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               164, 76
               

               Conread position:
               264-558
               

               Cow position:
               chr5:8821200-8820908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 121
               

               Conread position:
               264-558
               

               Cow position:
               chr5:22242974-22242660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 155
               

               Conread position:
               264-559
               

               Cow position:
               chr5:2309752-2309450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               215
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               79, 160
               

               Conread position:
               264-559
               

               Cow position:
               chr5:6839267-6838973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 145
               

               Conread position:
               264-559
               

               Cow position:
               chr5:26097107-26097395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               79, 47
               

               Conread position:
               264-559
               

               Cow position:
               chr5:41164900-41165194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 78
               

               Conread position:
               264-560
               

               Cow position:
               chr5:11668367-11668078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               110, 54
               

               Conread position:
               264-560
               

               Cow position:
               chr5:22643406-22643125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-560
               

               Cow position:
               chr5:30844922-30845217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 50
               

               Conread position:
               264-560
               

               Cow position:
               chr5:36855024-36855313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               106, 51
               

               Conread position:
               264-560
               

               Cow position:
               chr5:50943342-50943050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 192
               

               Conread position:
               264-560
               

               Cow position:
               chr5:61725781-61726072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 97
               

               Conread position:
               264-560
               

               Cow position:
               chr5:72007041-72006758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               264-561
               

               Cow position:
               chr5:7755741-7755461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               216
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               264-563
               

               Cow position:
               chr5:43457707-43457421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               264-566
               

               Cow position:
               chr5:4220792-4221091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 174
               

               Conread position:
               264-566
               

               Cow position:
               chr5:34049921-34050231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               105, 76
               

               Conread position:
               264-568
               

               Cow position:
               chr5:65941442-65941135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 153
               

               Conread position:
               264-570
               

               Cow position:
               chr5:4710331-4710035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               216
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               264-570
               

               Cow position:
               chr5:6045099-6045413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-570
               

               Cow position:
               chr5:9894314-9894006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 26
               

               Conread position:
               264-570
               

               Cow position:
               chr5:21617267-21617575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 57
               

               Conread position:
               264-570
               

               Cow position:
               chr5:23169007-23168709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               264-570
               

               Cow position:
               chr5:35684746-35685052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 137
               

               Conread position:
               264-570
               

               Cow position:
               chr5:37814435-37814743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               197
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               165, 43
               

               Conread position:
               264-570
               

               Cow position:
               chr5:41546082-41545776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               226
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               26, 59
               

               Conread position:
               264-570
               

               Cow position:
               chr5:44447075-44446748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 199
               

               Conread position:
               264-570
               

               Cow position:
               chr5:45803872-45804176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 40
               

               Conread position:
               264-570
               

               Cow position:
               chr5:46510055-46509748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 73
               

               Conread position:
               264-570
               

               Cow position:
               chr5:48010035-48009742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               224
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               157, 69
               

               Conread position:
               264-570
               

               Cow position:
               chr5:50533571-50533271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               77, 50
               

               Conread position:
               264-570
               

               Cow position:
               chr5:53835526-53835833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 48
               

               Conread position:
               264-570
               

               Cow position:
               chr5:57935302-57934991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               264-570
               

               Cow position:
               chr5:62172230-62172529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 51
               

               Conread position:
               264-570
               

               Cow position:
               chr5:65752668-65752977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-570
               

               Cow position:
               chr5:65776574-65776268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               79, 195
               

               Conread position:
               264-570
               

               Cow position:
               chr5:69461146-69461452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               264-570
               

               Cow position:
               chr5:72895504-72895803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               164, 48
               

               Conread position:
               264-572
               

               Cow position:
               chr5:7044899-7044586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-572
               

               Cow position:
               chr5:14314333-14314647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               265-421
               

               Cow position:
               chr5:63917598-63917444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               265-445
               

               Cow position:
               chr5:61656419-61656595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               76, 53
               

               Conread position:
               265-461
               

               Cow position:
               chr5:44587481-44587281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               79, 182
               

               Conread position:
               265-468
               

               Cow position:
               chr5:43395325-43395126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               105, 22
               

               Conread position:
               265-479
               

               Cow position:
               chr5:16184902-16185114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               78, 47
               

               Conread position:
               265-554
               

               Cow position:
               chr5:60210327-60210042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 93
               

               Conread position:
               265-557
               

               Cow position:
               chr5:44054225-44053951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               217
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               78, 88
               

               Conread position:
               265-557
               

               Cow position:
               chr5:67243738-67244022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 136
               

               Conread position:
               265-560
               

               Cow position:
               chr5:4032176-4031879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               105, 29
               

               Conread position:
               265-560
               

               Cow position:
               chr5:5257484-5257181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               51, 98
               

               Conread position:
               265-568
               

               Cow position:
               chr5:12322988-12322692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               79, 53
               

               Conread position:
               265-569
               

               Cow position:
               chr5:64524068-64523748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 313
               

               Conread position:
               265-585
               

               Cow position:
               chr5:39447718-39447407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 63
               

               Conread position:
               266-440
               

               Cow position:
               chr5:75828922-75828752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               266-479
               

               Cow position:
               chr5:17644842-17644628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               266-539
               

               Cow position:
               chr5:40152289-40152571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               78, 62
               

               Conread position:
               266-553
               

               Cow position:
               chr5:60952474-60952760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               78, 103
               

               Conread position:
               266-554
               

               Cow position:
               chr5:7193245-7193520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               77, 37
               

               Conread position:
               266-560
               

               Cow position:
               chr5:7723484-7723772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               96, 61
               

               Conread position:
               266-560
               

               Cow position:
               chr5:52000032-52000325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 183
               

               Conread position:
               266-563
               

               Cow position:
               chr5:32339162-32338855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               66, 157
               

               Conread position:
               266-569
               

               Cow position:
               chr5:32394414-32394714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               46, 77
               

               Conread position:
               266-569
               

               Cow position:
               chr5:72564575-72564879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 75
               

               Conread position:
               266-570
               

               Cow position:
               chr5:29903708-29903406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 13
               

               Conread position:
               266-570
               

               Cow position:
               chr5:57074521-57074214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 72
               

               Conread position:
               266-570
               

               Cow position:
               chr5:64176307-64176009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 166
               

               Conread position:
               267-544
               

               Cow position:
               chr5:52667844-52668129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               267-563
               

               Cow position:
               chr5:74015754-74016050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               268-523
               

               Cow position:
               chr5:6670382-6670123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 27
               

               Conread position:
               268-554
               

               Cow position:
               chr5:64321564-64321855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 112
               

               Conread position:
               268-570
               

               Cow position:
               chr5:46512951-46512652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 164
               

               Conread position:
               268-570
               

               Cow position:
               chr5:61810608-61810888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               269-547
               

               Cow position:
               chr5:71494633-71494915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 50
               

               Conread position:
               269-554
               

               Cow position:
               chr5:14550769-14550483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               74, 185
               

               Conread position:
               269-560
               

               Cow position:
               chr5:37808848-37808556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               153, 49
               

               Conread position:
               270-424
               

               Cow position:
               chr5:57576031-57576185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               74, 31
               

               Conread position:
               270-554
               

               Cow position:
               chr5:47323268-47323563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               96, 73
               

               Conread position:
               270-570
               

               Cow position:
               chr5:17768326-17768032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 19
               

               Conread position:
               271-446
               

               Cow position:
               chr5:39242371-39242203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               165, 49
               

               Conread position:
               271-499
               

               Cow position:
               chr5:24485607-24485388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               159, 36
               

               Conread position:
               271-545
               

               Cow position:
               chr5:34977021-34976750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               93, 57
               

               Conread position:
               271-553
               

               Cow position:
               chr5:54089856-54090135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               24, 120
               

               Conread position:
               272-547
               

               Cow position:
               chr5:14629996-14629716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               272-557
               

               Cow position:
               chr5:67540398-67540095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               39, 201
               

               Conread position:
               273-554
               

               Cow position:
               chr5:59631301-59631575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               5, 116
               

               Conread position:
               274-544
               

               Cow position:
               chr5:41713131-41713387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               31, 39
               

               Conread position:
               274-570
               

               Cow position:
               chr5:44028480-44028190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 41
               

               Conread position:
               275-469
               

               Cow position:
               chr5:58321880-58321683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               275-545
               

               Cow position:
               chr5:26505583-26505307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               69, 225
               

               Conread position:
               275-554
               

               Cow position:
               chr5:6286604-6286332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               276-450
               

               Cow position:
               chr5:47750771-47750947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-450
               

               Cow position:
               chr5:49116512-49116336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-451
               

               Cow position:
               chr5:53146063-53145885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               65, 97
               

               Conread position:
               276-465
               

               Cow position:
               chr5:2262550-2262359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-469
               

               Cow position:
               chr5:48972415-48972612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               276-476
               

               Cow position:
               chr5:42705088-42705283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               94, 38
               

               Conread position:
               276-510
               

               Cow position:
               chr5:12726876-12727113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-511
               

               Cow position:
               chr5:41532346-41532110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               62, 203
               

               Conread position:
               276-516
               

               Cow position:
               chr5:58770026-58769783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-518
               

               Cow position:
               chr5:75754274-75754029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-539
               

               Cow position:
               chr5:46732513-46732247 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chr5:279331-279059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chr5:1338079-1337807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chr5:3696787-3697059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 193
               

               Conread position:
               276-545
               

               Cow position:
               chr5:5715013-5714736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-545
               

               Cow position:
               chr5:7176147-7176427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               276-545
               

               Cow position:
               chr5:7397370-7397633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 26
               

               Conread position:
               276-545
               

               Cow position:
               chr5:8179002-8179274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chr5:10923004-10923275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               89, 207
               

               Conread position:
               276-545
               

               Cow position:
               chr5:14141511-14141783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               89, 202
               

               Conread position:
               276-545
               

               Cow position:
               chr5:18287490-18287761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               67, 129
               

               Conread position:
               276-545
               

               Cow position:
               chr5:24300105-24300379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               17, 221
               

               Conread position:
               276-545
               

               Cow position:
               chr5:26647542-26647816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 21
               

               Conread position:
               276-545
               

               Cow position:
               chr5:48937528-48937256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               276-546
               

               Cow position:
               chr5:73967608-73967339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 237
               

               Conread position:
               276-559
               

               Cow position:
               chr5:51935006-51935295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               67, 183
               

               Conread position:
               276-563
               

               Cow position:
               chr5:20270604-20270895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-563
               

               Cow position:
               chr5:41067847-41068136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               276-563
               

               Cow position:
               chr5:51903123-51903414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               68, 188
               

               Conread position:
               277-468
               

               Cow position:
               chr5:50052453-50052645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               67, 179
               

               Conread position:
               277-547
               

               Cow position:
               chr5:69520715-69520985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               277-560
               

               Cow position:
               chr5:62638730-62639011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               66, 35
               

               Conread position:
               278-469
               

               Cow position:
               chr5:9099610-9099419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               14, 18
               

               Conread position:
               278-517
               

               Cow position:
               chr5:29980160-29979918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               278-570
               

               Cow position:
               chr5:50599879-50600165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               279-554
               

               Cow position:
               chr5:3549951-3549691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               71, 36
               

               Conread position:
               279-558
               

               Cow position:
               chr5:27548667-27548388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 23
               

               Conread position:
               282-472
               

               Cow position:
               chr5:31223087-31222896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               282-505
               

               Cow position:
               chr5:27015510-27015732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 134
               

               Conread position:
               286-428
               

               Cow position:
               chr5:61875344-61875211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               286-548
               

               Cow position:
               chr5:30178677-30178409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               78, 41
               

               Conread position:
               286-552
               

               Cow position:
               chr5:27411562-27411302 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               59, 68
               

               Conread position:
               286-557
               

               Cow position:
               chr5:56467538-56467794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               286-570
               

               Cow position:
               chr5:30950086-30949798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 133
               

               Conread position:
               286-570
               

               Cow position:
               chr5:56014568-56014848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               57, 46
               

               Conread position:
               287-451
               

               Cow position:
               chr5:41109545-41109711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               57, 143
               

               Conread position:
               287-544
               

               Cow position:
               chr5:39874957-39875215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               90, 23
               

               Conread position:
               287-546
               

               Cow position:
               chr5:55955740-55956001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               197
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               56, 76
               

               Conread position:
               287-554
               

               Cow position:
               chr5:66972257-66972530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               13, 176
               

               Conread position:
               289-560
               

               Cow position:
               chr5:16214524-16214794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 29
               

               Conread position:
               289-560
               

               Cow position:
               chr5:54060110-54060383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               290-516
               

               Cow position:
               chr5:21920205-21920443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 230
               

               Conread position:
               291-573
               

               Cow position:
               chr5:28807527-28807241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               293-570
               

               Cow position:
               chr5:3582413-3582677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               50, 22
               

               Conread position:
               294-544
               

               Cow position:
               chr5:62107653-62107395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               49, 152
               

               Conread position:
               294-559
               

               Cow position:
               chr5:46426009-46425749 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               49, 24
               

               Conread position:
               294-570
               

               Cow position:
               chr5:45397420-45397686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               50, 24
               

               Conread position:
               295-479
               

               Cow position:
               chr5:71579016-71579202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               295-570
               

               Cow position:
               chr5:50821621-50821900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               297-544
               

               Cow position:
               chr5:45999180-45998930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               61, 47
               

               Conread position:
               297-560
               

               Cow position:
               chr5:23529432-23529175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               298-545
               

               Cow position:
               chr5:36616437-36616682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               163
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               67, 147
               

               Conread position:
               303-545
               

               Cow position:
               chr5:37654129-37654376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               40, 183
               

               Conread position:
               303-554
               

               Cow position:
               chr5:19523742-19524001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               303-554
               

               Cow position:
               chr5:61809838-61809585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               41, 66
               

               Conread position:
               303-559
               

               Cow position:
               chr5:12761270-12761012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               9, 41
               

               Conread position:
               304-559
               

               Cow position:
               chr5:19278853-19278600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               11, 134
               

               Conread position:
               304-568
               

               Cow position:
               chr5:16206308-16206040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               35, 198
               

               Conread position:
               305-545
               

               Cow position:
               chr5:36255411-36255165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               38, 86
               

               Conread position:
               305-556
               

               Cow position:
               chr5:63865644-63865899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               38, 211
               

               Conread position:
               310-538
               

               Cow position:
               chr5:31144933-31144702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               181
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               310-554
               

               Cow position:
               chr5:6683502-6683266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               10, 59
               

               Conread position:
               310-554
               

               Cow position:
               chr5:65883922-65883671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               310-560
               

               Cow position:
               chr5:20422325-20422086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               122, 28
               

               Conread position:
               310-572
               

               Cow position:
               chr5:68718731-68718986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               122, 46
               

               Conread position:
               311-516
               

               Cow position:
               chr5:70952021-70951817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               32, 125
               

               Conread position:
               311-568
               

               Cow position:
               chr5:56877343-56877597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               30, 68
               

               Conread position:
               314-572
               

               Cow position:
               chr5:25035384-25035139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               29, 19
               

               Conread position:
               315-570
               

               Cow position:
               chr5:64027149-64026902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               28, 122
               

               Conread position:
               316-570
               

               Cow position:
               chr5:72951699-72951961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               27, 220
               

               Conread position:
               318-554
               

               Cow position:
               chr5:19335928-19335680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               12, 168
               

               Conread position:
               320-498
               

               Cow position:
               chr5:7921536-7921359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 138
               

               Conread position:
               320-554
               

               Cow position:
               chr5:14473549-14473303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               43, 15
               

               Conread position:
               320-580
               

               Cow position:
               chr5:35763142-35763390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               109, 21
               

               Conread position:
               321-492
               

               Cow position:
               chr5:38647224-38647394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               131
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               322-535
               

               Cow position:
               chr5:991332-991546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               22, 134
               

               Conread position:
               322-544
               

               Cow position:
               chr5:34300782-34301003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               19, 193
               

               Conread position:
               322-554
               

               Cow position:
               chr5:57768113-57767884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               52, 14
               

               Conread position:
               322-568
               

               Cow position:
               chr5:25495482-25495242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               323-450
               

               Cow position:
               chr5:31020268-31020140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               20, 92
               

               Conread position:
               324-545
               

               Cow position:
               chr5:45273633-45273409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               19, 83
               

               Conread position:
               324-552
               

               Cow position:
               chr5:54768042-54767810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               165
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               19, 135
               

               Conread position:
               325-548
               

               Cow position:
               chr5:33552539-33552328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               121, 18
               

               Conread position:
               325-569
               

               Cow position:
               chr5:57419926-57419679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               12, 136
               

               Conread position:
               325-569
               

               Cow position:
               chr5:63427137-63426890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               42, 18
               

               Conread position:
               326-557
               

               Cow position:
               chr5:39258395-39258609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               38, 14
               

               Conread position:
               326-573
               

               Cow position:
               chr5:44726456-44726214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               17, 109
               

               Conread position:
               330-560
               

               Cow position:
               chr5:18289003-18289229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 162
               

               Conread position:
               330-563
               

               Cow position:
               chr5:58490591-58490839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 79
               

               Conread position:
               330-572
               

               Cow position:
               chr5:56680121-56680375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               337-554
               

               Cow position:
               chr5:23678822-23678601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               33, 187
               

               Conread position:
               337-570
               

               Cow position:
               chr5:45574497-45574737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               61, 68
               

               Conread position:
               338-569
               

               Cow position:
               chr5:12901798-12902032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               32, 227
               

               Conread position:
               342-554
               

               Cow position:
               chr5:33560847-33560633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               342-554
               

               Cow position:
               chr5:57561404-57561624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               28, 66
               

               Conread position:
               342-556
               

               Cow position:
               chr5:13717684-13717465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               28, 120
               

               Conread position:
               342-569
               

               Cow position:
               chr5:53710807-53710574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               28, 226
               

               Conread position:
               342-573
               

               Cow position:
               chr5:64592205-64591975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               89, 11
               

               Conread position:
               343-539
               

               Cow position:
               chr5:7697893-7698086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               116, 91
               

               Conread position:
               343-554
               

               Cow position:
               chr5:58446691-58446908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               84, 117
               

               Conread position:
               343-572
               

               Cow position:
               chr5:42670968-42670745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               170
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               159, 45
               

               Conread position:
               343-573
               

               Cow position:
               chr5:60016055-60016285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               5.04467e-44
               

               Alignm gaps (pig, cow):
               86, 178
               

               Conread position:
               344-501
               

               Cow position:
               chr5:55849854-55849696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               93, 129
               

               Conread position:
               345-568
               

               Cow position:
               chr5:60183691-60183920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               172
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               346-570
               

               Cow position:
               chr5:14921039-14920813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               79, 134
               

               Conread position:
               346-571
               

               Cow position:
               chr5:35125945-35126173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               84, 9
               

               Conread position:
               347-569
               

               Cow position:
               chr5:73418391-73418174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               349-563
               

               Cow position:
               chr5:62378685-62378890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               350-547
               

               Cow position:
               chr5:56635795-56635989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 66
               

               Conread position:
               351-560
               

               Cow position:
               chr5:12557396-12557180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               74, 181
               

               Conread position:
               351-570
               

               Cow position:
               chr5:54375611-54375385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               79, 106
               

               Conread position:
               353-516
               

               Cow position:
               chr5:56867922-56868074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               354-545
               

               Cow position:
               chr5:36650448-36650645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               354-560
               

               Cow position:
               chr5:41293979-41294187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               356-560
               

               Cow position:
               chr5:55019194-55019399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               19, 102
               

               Conread position:
               358-585
               

               Cow position:
               chr5:30232802-30233039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 211
               

               Conread position:
               363-554
               

               Cow position:
               chr5:1087288-1087098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               78, 39
               

               Conread position:
               363-560
               

               Cow position:
               chr5:50575693-50575890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               67, 94
               

               Conread position:
               372-570
               

               Cow position:
               chr5:43402817-43403022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               374-570
               

               Cow position:
               chr5:66551980-66551779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               376-570
               

               Cow position:
               chr5:69636156-69636341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               377-573
               

               Cow position:
               chr5:29912341-29912540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               53, 33
               

               Conread position:
               390-557
               

               Cow position:
               chr5:67212291-67212465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               391-559
               

               Cow position:
               chr5:1461023-1461195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               391-563
               

               Cow position:
               chr5:63150231-63150059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               41, 21
               

               Conread position:
               391-570
               

               Cow position:
               chr5:59627038-59626855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               144
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               41, 181
               

               Conread position:
               393-559
               

               Cow position:
               chr5:26150483-26150315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               37, 124
               

               Conread position:
               403-554
               

               Cow position:
               chr5:43408411-43408257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               26, 76
               

               Conread position:
               409-554
               

               Cow position:
               chr5:63192788-63192640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               23, 114
               

               Conread position:
               409-558
               

               Cow position:
               chr5:56339066-56338916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               23, 49
               

               Conread position:
               410-570
               

               Cow position:
               chr5:56517057-56517221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               22, 51
               

               Conread position:
               412-570
               

               Cow position:
               chr5:69099675-69099837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               415-558
               

               Cow position:
               chr5:31052345-31052485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               415-570
               

               Cow position:
               chr5:35982781-35982620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               416-568
               

               Cow position:
               chr5:61102675-61102831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               16, 75
               

               Conread position:
               443-570
               

               Cow position:
               chr5:9234000-9233872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               12, 0
               
Show alignments to all cow chromosomes.
Conread position:	199-545
Cow position:	chr5:3242727-3242389 (view UCSC Genome Browser custom track)
Alignm length:	351
Alignm identity:	231
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	70, 28
Conread position:	199-573
Cow position:	chr5:30276433-30276810 (view UCSC Genome Browser custom track)
Alignm length:	383
Alignm identity:	276
Alignm E-value:	0
Alignm gaps (pig, cow):	25, 241
Conread position:	200-547
Cow position:	chr5:458229-458582 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	241
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	58, 24
Conread position:	221-510
Cow position:	chr5:35235943-35235652 (view UCSC Genome Browser custom track)
Alignm length:	300
Alignm identity:	211
Alignm E-value:	5e-34
Alignm gaps (pig, cow):	18, 10
Conread position:	228-548
Cow position:	chr5:48154700-48154370 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	229
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	36, 68
Conread position:	238-554
Cow position:	chr5:50215775-50215461 (view UCSC Genome Browser custom track)
Alignm length:	322
Alignm identity:	216
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	26, 44
Conread position:	238-572
Cow position:	chr5:30629367-30629037 (view UCSC Genome Browser custom track)
Alignm length:	343
Alignm identity:	260
Alignm E-value:	0
Alignm gaps (pig, cow):	105, 5
Conread position:	239-554
Cow position:	chr5:51053863-51053548 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	224
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	26, 16
Conread position:	240-548
Cow position:	chr5:29212733-29213033 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	215
Alignm E-value:	5e-33
Alignm gaps (pig, cow):	25, 74
Conread position:	241-547
Cow position:	chr5:40388080-40387786 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	210
Alignm E-value:	6e-24
Alignm gaps (pig, cow):	24, 55
Conread position:	241-554
Cow position:	chr5:11427455-11427132 (view UCSC Genome Browser custom track)
Alignm length:	324
Alignm identity:	229
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 0
Conread position:	241-560
Cow position:	chr5:43992112-43992431 (view UCSC Genome Browser custom track)
Alignm length:	327
Alignm identity:	228
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	133, 14
Conread position:	241-568
Cow position:	chr5:66257429-66257751 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	251
Alignm E-value:	0
Alignm gaps (pig, cow):	24, 14
Conread position:	242-537
Cow position:	chr5:40357082-40356762 (view UCSC Genome Browser custom track)
Alignm length:	322
Alignm identity:	227
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	13, 49
Conread position:	243-548
Cow position:	chr5:5201704-5201996 (view UCSC Genome Browser custom track)
Alignm length:	315
Alignm identity:	214
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	22, 37
Conread position:	244-428
Cow position:	chr5:1105082-1104890 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	149
Alignm E-value:	1e-32
Alignm gaps (pig, cow):	21, 184
Conread position:	244-450
Cow position:	chr5:9070700-9070500 (view UCSC Genome Browser custom track)
Alignm length:	211
Alignm identity:	149
Alignm E-value:	1e-22
Alignm gaps (pig, cow):	22, 96
Conread position:	244-502
Cow position:	chr5:4797522-4797274 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	196
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	9, 78
Conread position:	244-521
Cow position:	chr5:20554960-20554686 (view UCSC Genome Browser custom track)
Alignm length:	285
Alignm identity:	197
Alignm E-value:	1e-30
Alignm gaps (pig, cow):	21, 11
Conread position:	244-533
Cow position:	chr5:28926396-28926100 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	206
Alignm E-value:	3e-39
Alignm gaps (pig, cow):	99, 0