Non-Coding RNA Search

Cow genome map


           Conread name:
           rplac_7362.y1
        

               Conread position:
               8-253
               

               Cow position:
               chrX:13086007-13085751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               12-287
               

               Cow position:
               chrX:16224003-16223730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               195-570
               

               Cow position:
               chrX:41192425-41192822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               265
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               70, 117
               

               Conread position:
               204-543
               

               Cow position:
               chrX:158025-157686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               204-560
               

               Cow position:
               chrX:7277670-7278019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               10, 34
               

               Conread position:
               206-568
               

               Cow position:
               chrX:38852953-38853313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 10
               

               Conread position:
               207-554
               

               Cow position:
               chrX:29680501-29680159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               253
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               46, 14
               

               Conread position:
               207-560
               

               Cow position:
               chrX:14973985-14973638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               247
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               38, 105
               

               Conread position:
               229-557
               

               Cow position:
               chrX:44396786-44397114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               7, 101
               

               Conread position:
               235-557
               

               Cow position:
               chrX:39126112-39126431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               237-428
               

               Cow position:
               chrX:45658288-45658106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               18, 6
               

               Conread position:
               237-554
               

               Cow position:
               chrX:16996291-16996594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 82
               

               Conread position:
               241-545
               

               Cow position:
               chrX:34543575-34543877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               241-570
               

               Cow position:
               chrX:24424600-24424283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 14
               

               Conread position:
               242-427
               

               Cow position:
               chrX:46430070-46429887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               24, 79
               

               Conread position:
               243-554
               

               Cow position:
               chrX:38935071-38935381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 151
               

               Conread position:
               243-560
               

               Cow position:
               chrX:11073401-11073083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 73
               

               Conread position:
               243-568
               

               Cow position:
               chrX:9201337-9201664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               244-470
               

               Cow position:
               chrX:4942960-4942744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               21, 65
               

               Conread position:
               244-472
               

               Cow position:
               chrX:14924790-14925021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               21, 30
               

               Conread position:
               244-472
               

               Cow position:
               chrX:29509654-29509419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               21, 77
               

               Conread position:
               244-488
               

               Cow position:
               chrX:9997544-9997298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               187
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               21, 69
               

               Conread position:
               244-506
               

               Cow position:
               chrX:43408788-43409063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               15, 70
               

               Conread position:
               244-516
               

               Cow position:
               chrX:13785577-13785296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 20
               

               Conread position:
               244-548
               

               Cow position:
               chrX:11844451-11844145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               14, 47
               

               Conread position:
               244-548
               

               Cow position:
               chrX:17231524-17231831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               21, 95
               

               Conread position:
               244-553
               

               Cow position:
               chrX:22812852-22813163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               14, 179
               

               Conread position:
               244-554
               

               Cow position:
               chrX:16541886-16541555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               244-554
               

               Cow position:
               chrX:21064076-21064385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               21, 51
               

               Conread position:
               244-554
               

               Cow position:
               chrX:23564007-23563689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               21, 238
               

               Conread position:
               244-557
               

               Cow position:
               chrX:31949141-31948830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               21, 83
               

               Conread position:
               244-560
               

               Cow position:
               chrX:15545687-15545990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               126, 49
               

               Conread position:
               244-560
               

               Cow position:
               chrX:27174784-27175106 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               244-560
               

               Cow position:
               chrX:27705383-27705694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               244-560
               

               Cow position:
               chrX:31443031-31442721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 76
               

               Conread position:
               244-560
               

               Cow position:
               chrX:34565086-34565392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               99, 20
               

               Conread position:
               244-560
               

               Cow position:
               chrX:46722951-46722626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               21, 239
               

               Conread position:
               244-570
               

               Cow position:
               chrX:6544046-6544372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               244-570
               

               Cow position:
               chrX:17794775-17795099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 81
               

               Conread position:
               244-570
               

               Cow position:
               chrX:35542681-35543005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 186
               

               Conread position:
               244-570
               

               Cow position:
               chrX:37119389-37119711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               21, 52
               

               Conread position:
               244-570
               

               Cow position:
               chrX:39558558-39558231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               244-572
               

               Cow position:
               chrX:7721774-7722109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 280
               

               Conread position:
               245-428
               

               Cow position:
               chrX:25411630-25411815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               53, 77
               

               Conread position:
               245-428
               

               Cow position:
               chrX:33020276-33020458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 76
               

               Conread position:
               245-428
               

               Cow position:
               chrX:43049136-43049323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               245-430
               

               Cow position:
               chrX:2648560-2648377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               21, 68
               

               Conread position:
               245-450
               

               Cow position:
               chrX:1978300-1978506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 56
               

               Conread position:
               245-472
               

               Cow position:
               chrX:23497873-23497647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               245-541
               

               Cow position:
               chrX:17541754-17542049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               20, 99
               

               Conread position:
               245-545
               

               Cow position:
               chrX:18651252-18650948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               245-546
               

               Cow position:
               chrX:24366041-24365727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               245-548
               

               Cow position:
               chrX:2467670-2467980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               222
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               20, 186
               

               Conread position:
               245-552
               

               Cow position:
               chrX:34502710-34503020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 210
               

               Conread position:
               245-554
               

               Cow position:
               chrX:5872107-5872419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               98, 210
               

               Conread position:
               245-554
               

               Cow position:
               chrX:15147396-15147095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               245-554
               

               Cow position:
               chrX:21664933-21664619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 40
               

               Conread position:
               245-554
               

               Cow position:
               chrX:30421149-30420850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 176
               

               Conread position:
               245-557
               

               Cow position:
               chrX:25419371-25419048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               20, 152
               

               Conread position:
               245-557
               

               Cow position:
               chrX:42011070-42011386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               219
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               245-558
               

               Cow position:
               chrX:27680193-27680504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 90
               

               Conread position:
               245-560
               

               Cow position:
               chrX:3579736-3580052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               14, 75
               

               Conread position:
               245-560
               

               Cow position:
               chrX:6278715-6278390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 222
               

               Conread position:
               245-560
               

               Cow position:
               chrX:29120848-29121155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               20, 10
               

               Conread position:
               245-560
               

               Cow position:
               chrX:30543496-30543176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 25
               

               Conread position:
               245-560
               

               Cow position:
               chrX:41122862-41123167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               20, 65
               

               Conread position:
               245-560
               

               Cow position:
               chrX:42171509-42171188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 309
               

               Conread position:
               245-561
               

               Cow position:
               chrX:1503129-1503436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               20, 86
               

               Conread position:
               245-566
               

               Cow position:
               chrX:12290526-12290833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               224
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               20, 77
               

               Conread position:
               245-568
               

               Cow position:
               chrX:32309896-32310221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 142
               

               Conread position:
               245-570
               

               Cow position:
               chrX:878581-878262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               245-570
               

               Cow position:
               chrX:12980041-12979716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 172
               

               Conread position:
               245-570
               

               Cow position:
               chrX:33855441-33855102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 91
               

               Conread position:
               245-570
               

               Cow position:
               chrX:37072196-37072507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 58
               

               Conread position:
               246-427
               

               Cow position:
               chrX:44731388-44731571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               246-444
               

               Cow position:
               chrX:35388111-35387909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               167
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               246-452
               

               Cow position:
               chrX:42339143-42338943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               246-454
               

               Cow position:
               chrX:7513308-7513513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               246-457
               

               Cow position:
               chrX:17271496-17271283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               19, 165
               

               Conread position:
               246-470
               

               Cow position:
               chrX:4750506-4750285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 38
               

               Conread position:
               246-472
               

               Cow position:
               chrX:40647770-40648006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               13, 105
               

               Conread position:
               246-496
               

               Cow position:
               chrX:42086654-42086890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-502
               

               Cow position:
               chrX:19015235-19015487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               197
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-505
               

               Cow position:
               chrX:40788997-40789265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-507
               

               Cow position:
               chrX:7425258-7425525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-507
               

               Cow position:
               chrX:28845638-28845888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               246-509
               

               Cow position:
               chrX:42994407-42994670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-515
               

               Cow position:
               chrX:25232383-25232656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-520
               

               Cow position:
               chrX:1810369-1810092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               9, 47
               

               Conread position:
               246-522
               

               Cow position:
               chrX:26876089-26875811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-523
               

               Cow position:
               chrX:678775-678484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               216
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-534
               

               Cow position:
               chrX:619215-618920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-535
               

               Cow position:
               chrX:16416301-16416592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-538
               

               Cow position:
               chrX:44961542-44961837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               128, 94
               

               Conread position:
               246-542
               

               Cow position:
               chrX:29542426-29542127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-543
               

               Cow position:
               chrX:25337971-25338279 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               19, 152
               

               Conread position:
               246-545
               

               Cow position:
               chrX:11856222-11856523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-545
               

               Cow position:
               chrX:21672344-21672653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-545
               

               Cow position:
               chrX:31250184-31250481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 112
               

               Conread position:
               246-545
               

               Cow position:
               chrX:46032929-46032634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               16, 9
               

               Conread position:
               246-546
               

               Cow position:
               chrX:20340098-20339798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 61
               

               Conread position:
               246-547
               

               Cow position:
               chrX:22624273-22624571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               19, 36
               

               Conread position:
               246-547
               

               Cow position:
               chrX:38549241-38549542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 127
               

               Conread position:
               246-554
               

               Cow position:
               chrX:3154454-3154141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               211
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-554
               

               Cow position:
               chrX:9161382-9161677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               97, 66
               

               Conread position:
               246-554
               

               Cow position:
               chrX:27394221-27393924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               246-554
               

               Cow position:
               chrX:33639766-33640077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               120, 81
               

               Conread position:
               246-554
               

               Cow position:
               chrX:37489523-37489821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-557
               

               Cow position:
               chrX:1616255-1615938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-559
               

               Cow position:
               chrX:9651253-9650917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               12, 185
               

               Conread position:
               246-560
               

               Cow position:
               chrX:23514225-23513909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               246-560
               

               Cow position:
               chrX:29602038-29601720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               246-560
               

               Cow position:
               chrX:37910245-37910553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-560
               

               Cow position:
               chrX:42247391-42247074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-560
               

               Cow position:
               chrX:48010387-48010712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               246-563
               

               Cow position:
               chrX:7508934-7509250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 36
               

               Conread position:
               246-563
               

               Cow position:
               chrX:35224094-35224407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 37
               

               Conread position:
               246-563
               

               Cow position:
               chrX:38094733-38094409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 44
               

               Conread position:
               246-565
               

               Cow position:
               chrX:13912873-13913188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               244
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               13, 78
               

               Conread position:
               246-566
               

               Cow position:
               chrX:31489305-31489634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               228
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               13, 97
               

               Conread position:
               246-570
               

               Cow position:
               chrX:11655881-11656199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               246-570
               

               Cow position:
               chrX:13177672-13177358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 75
               

               Conread position:
               246-570
               

               Cow position:
               chrX:13647990-13647667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 62
               

               Conread position:
               246-570
               

               Cow position:
               chrX:22074593-22074918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               246-570
               

               Cow position:
               chrX:27432126-27431800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chrX:33493567-33493894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 132
               

               Conread position:
               246-570
               

               Cow position:
               chrX:34411632-34411964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 100
               

               Conread position:
               246-570
               

               Cow position:
               chrX:40269269-40269610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chrX:42381307-42380994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               246-570
               

               Cow position:
               chrX:42470144-42469823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 76
               

               Conread position:
               247-442
               

               Cow position:
               chrX:42282225-42282420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               247-543
               

               Cow position:
               chrX:29032208-29032502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               247-545
               

               Cow position:
               chrX:21004474-21004777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               218
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 93
               

               Conread position:
               247-547
               

               Cow position:
               chrX:24132357-24132056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               247-554
               

               Cow position:
               chrX:6690457-6690158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               9, 77
               

               Conread position:
               247-559
               

               Cow position:
               chrX:4044058-4043760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 97
               

               Conread position:
               247-560
               

               Cow position:
               chrX:11717989-11717675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               12, 68
               

               Conread position:
               247-563
               

               Cow position:
               chrX:38963900-38964219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               18, 8
               

               Conread position:
               247-570
               

               Cow position:
               chrX:11939130-11938815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 8
               

               Conread position:
               247-570
               

               Cow position:
               chrX:31436279-31436592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 12
               

               Conread position:
               248-487
               

               Cow position:
               chrX:37048786-37048546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               17, 124
               

               Conread position:
               248-545
               

               Cow position:
               chrX:4269270-4268971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               95, 70
               

               Conread position:
               248-554
               

               Cow position:
               chrX:630513-630208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               214
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               66, 7
               

               Conread position:
               248-560
               

               Cow position:
               chrX:10959607-10959287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               18, 99
               

               Conread position:
               248-572
               

               Cow position:
               chrX:37781321-37780989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               249-543
               

               Cow position:
               chrX:25713591-25713887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               95, 140
               

               Conread position:
               249-570
               

               Cow position:
               chrX:17725769-17726093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 72
               

               Conread position:
               251-554
               

               Cow position:
               chrX:34554528-34554825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               121, 64
               

               Conread position:
               257-468
               

               Cow position:
               chrX:30921991-30922205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               87, 24
               

               Conread position:
               257-512
               

               Cow position:
               chrX:19188742-19188991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               113, 84
               

               Conread position:
               257-545
               

               Cow position:
               chrX:21593089-21593374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               213
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               86, 198
               

               Conread position:
               257-553
               

               Cow position:
               chrX:43780047-43779746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               55, 192
               

               Conread position:
               257-554
               

               Cow position:
               chrX:44054607-44054904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               84, 61
               

               Conread position:
               257-557
               

               Cow position:
               chrX:7646066-7646356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               86, 55
               

               Conread position:
               257-570
               

               Cow position:
               chrX:40035639-40035322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 84
               

               Conread position:
               264-420
               

               Cow position:
               chrX:41403785-41403945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-420
               

               Cow position:
               chrX:41410333-41410493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-428
               

               Cow position:
               chrX:24149452-24149615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               77, 48
               

               Conread position:
               264-453
               

               Cow position:
               chrX:8682117-8681925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               79, 28
               

               Conread position:
               264-461
               

               Cow position:
               chrX:1505525-1505720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               105, 23
               

               Conread position:
               264-479
               

               Cow position:
               chrX:17908471-17908261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               166, 50
               

               Conread position:
               264-485
               

               Cow position:
               chrX:38439287-38439514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               178
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-503
               

               Cow position:
               chrX:35681159-35681393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               264-504
               

               Cow position:
               chrX:42461933-42461692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               160, 78
               

               Conread position:
               264-504
               

               Cow position:
               chrX:42874790-42875035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               187
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               79, 198
               

               Conread position:
               264-507
               

               Cow position:
               chrX:32743351-32743593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               127, 54
               

               Conread position:
               264-509
               

               Cow position:
               chrX:8070889-8070642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               168
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               264-510
               

               Cow position:
               chrX:12249619-12249869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               119, 29
               

               Conread position:
               264-516
               

               Cow position:
               chrX:31260817-31260555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               79, 121
               

               Conread position:
               264-516
               

               Cow position:
               chrX:40116234-40116484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               80, 48
               

               Conread position:
               264-520
               

               Cow position:
               chrX:38071958-38071698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               67, 194
               

               Conread position:
               264-521
               

               Cow position:
               chrX:11589776-11589519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               195
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               264-537
               

               Cow position:
               chrX:5638357-5638084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               30, 77
               

               Conread position:
               264-537
               

               Cow position:
               chrX:42507834-42507563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               71, 54
               

               Conread position:
               264-544
               

               Cow position:
               chrX:34663031-34662754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               105, 43
               

               Conread position:
               264-545
               

               Cow position:
               chrX:23583371-23583654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               80, 88
               

               Conread position:
               264-545
               

               Cow position:
               chrX:40809499-40809786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               264-545
               

               Cow position:
               chrX:46532697-46532402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               79, 116
               

               Conread position:
               264-545
               

               Cow position:
               chrX:46771157-46770870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               264-547
               

               Cow position:
               chrX:34401810-34402095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               264-547
               

               Cow position:
               chrX:34441638-34441359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               77, 7
               

               Conread position:
               264-547
               

               Cow position:
               chrX:43730402-43730129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               264-548
               

               Cow position:
               chrX:841971-842253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               105, 54
               

               Conread position:
               264-553
               

               Cow position:
               chrX:47344107-47344397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               105, 79
               

               Conread position:
               264-554
               

               Cow position:
               chrX:7497056-7497344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 66
               

               Conread position:
               264-554
               

               Cow position:
               chrX:15485814-15485532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               264-554
               

               Cow position:
               chrX:17662784-17662496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               214
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               79, 190
               

               Conread position:
               264-554
               

               Cow position:
               chrX:36283158-36283442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               77, 180
               

               Conread position:
               264-554
               

               Cow position:
               chrX:44657152-44656855 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               100, 76
               

               Conread position:
               264-554
               

               Cow position:
               chrX:48236624-48236919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               37, 171
               

               Conread position:
               264-557
               

               Cow position:
               chrX:4826015-4825731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               80, 50
               

               Conread position:
               264-557
               

               Cow position:
               chrX:8797060-8797354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               220
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               80, 234
               

               Conread position:
               264-559
               

               Cow position:
               chrX:45430204-45429915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               264-560
               

               Cow position:
               chrX:22821860-22822154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               80, 107
               

               Conread position:
               264-560
               

               Cow position:
               chrX:23091694-23091979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-560
               

               Cow position:
               chrX:25035575-25035274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               79, 196
               

               Conread position:
               264-560
               

               Cow position:
               chrX:26625864-26625563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 124
               

               Conread position:
               264-560
               

               Cow position:
               chrX:36975762-36976059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               100, 63
               

               Conread position:
               264-560
               

               Cow position:
               chrX:38936513-38936808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 54
               

               Conread position:
               264-562
               

               Cow position:
               chrX:14884149-14883845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               264-563
               

               Cow position:
               chrX:7571719-7572016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               264-563
               

               Cow position:
               chrX:9416880-9416573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               264-563
               

               Cow position:
               chrX:42235721-42235413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               264-566
               

               Cow position:
               chrX:9635368-9635077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 51
               

               Conread position:
               264-568
               

               Cow position:
               chrX:37232222-37232523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 180
               

               Conread position:
               264-568
               

               Cow position:
               chrX:41884605-41884296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               264-570
               

               Cow position:
               chrX:5017595-5017304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               77, 54
               

               Conread position:
               264-570
               

               Cow position:
               chrX:22482876-22482573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 69
               

               Conread position:
               264-570
               

               Cow position:
               chrX:31311838-31312147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 147
               

               Conread position:
               264-570
               

               Cow position:
               chrX:34532341-34532638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               165, 51
               

               Conread position:
               264-570
               

               Cow position:
               chrX:37574669-37574958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 51
               

               Conread position:
               264-570
               

               Cow position:
               chrX:45110468-45110774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 79
               

               Conread position:
               264-574
               

               Cow position:
               chrX:38006955-38006648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 178
               

               Conread position:
               264-575
               

               Cow position:
               chrX:33000716-33001027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 79
               

               Conread position:
               264-585
               

               Cow position:
               chrX:10866055-10865742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               265-418
               

               Cow position:
               chrX:4123649-4123802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 55
               

               Conread position:
               265-448
               

               Cow position:
               chrX:31256681-31256863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               167, 76
               

               Conread position:
               265-450
               

               Cow position:
               chrX:24234664-24234479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               128
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               100, 79
               

               Conread position:
               265-513
               

               Cow position:
               chrX:36961449-36961702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               78, 187
               

               Conread position:
               265-517
               

               Cow position:
               chrX:12018089-12018357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               265-554
               

               Cow position:
               chrX:1514587-1514317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               102, 53
               

               Conread position:
               265-554
               

               Cow position:
               chrX:21642665-21642380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               109, 10
               

               Conread position:
               265-554
               

               Cow position:
               chrX:38218521-38218816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               209
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               78, 104
               

               Conread position:
               265-559
               

               Cow position:
               chrX:26492816-26493113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               79, 178
               

               Conread position:
               265-559
               

               Cow position:
               chrX:35273165-35273471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 132
               

               Conread position:
               265-560
               

               Cow position:
               chrX:29545066-29544769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               79, 37
               

               Conread position:
               265-570
               

               Cow position:
               chrX:9252364-9252045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 35
               

               Conread position:
               265-570
               

               Cow position:
               chrX:40557862-40557561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 42
               

               Conread position:
               266-416
               

               Cow position:
               chrX:2206729-2206588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               98, 52
               

               Conread position:
               266-504
               

               Cow position:
               chrX:34990855-34991088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               191
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               77, 41
               

               Conread position:
               266-515
               

               Cow position:
               chrX:39938708-39938460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               266-533
               

               Cow position:
               chrX:37540939-37541198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               103, 64
               

               Conread position:
               266-545
               

               Cow position:
               chrX:40481058-40480779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 190
               

               Conread position:
               266-547
               

               Cow position:
               chrX:11633493-11633777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               77, 52
               

               Conread position:
               266-547
               

               Cow position:
               chrX:46073006-46072720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               164, 75
               

               Conread position:
               266-554
               

               Cow position:
               chrX:29289391-29289680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               77, 124
               

               Conread position:
               266-554
               

               Cow position:
               chrX:40183535-40183252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               78, 196
               

               Conread position:
               266-560
               

               Cow position:
               chrX:161236-161520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               162, 41
               

               Conread position:
               266-560
               

               Cow position:
               chrX:45174659-45174958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               38, 120
               

               Conread position:
               266-560
               

               Cow position:
               chrX:46587632-46587930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               108, 58
               

               Conread position:
               266-570
               

               Cow position:
               chrX:6413861-6414159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 21
               

               Conread position:
               266-570
               

               Cow position:
               chrX:41526709-41526411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               266-570
               

               Cow position:
               chrX:45414485-45414186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 52
               

               Conread position:
               267-570
               

               Cow position:
               chrX:8869593-8869284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 106
               

               Conread position:
               267-570
               

               Cow position:
               chrX:36067835-36068133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 51
               

               Conread position:
               267-570
               

               Cow position:
               chrX:45845911-45846219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 230
               

               Conread position:
               268-560
               

               Cow position:
               chrX:45404017-45403717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               207
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               269-453
               

               Cow position:
               chrX:14819530-14819721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               269-453
               

               Cow position:
               chrX:45759215-45759392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               75, 46
               

               Conread position:
               269-564
               

               Cow position:
               chrX:32820847-32821139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               74, 11
               

               Conread position:
               270-554
               

               Cow position:
               chrX:7336645-7336943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               23, 50
               

               Conread position:
               271-545
               

               Cow position:
               chrX:14846254-14845977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               73, 203
               

               Conread position:
               271-570
               

               Cow position:
               chrX:10252363-10252082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               223
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               72, 30
               

               Conread position:
               272-516
               

               Cow position:
               chrX:48044379-48044135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               37, 151
               

               Conread position:
               272-546
               

               Cow position:
               chrX:19690038-19690309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 108
               

               Conread position:
               273-472
               

               Cow position:
               chrX:9770863-9770656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               57, 198
               

               Conread position:
               273-543
               

               Cow position:
               chrX:24288111-24287842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               193
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               57, 103
               

               Conread position:
               273-545
               

               Cow position:
               chrX:36060973-36061253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 209
               

               Conread position:
               273-545
               

               Cow position:
               chrX:45786950-45787223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               70, 101
               

               Conread position:
               273-568
               

               Cow position:
               chrX:34376777-34377058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               158, 68
               

               Conread position:
               275-468
               

               Cow position:
               chrX:1104980-1104784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 175
               

               Conread position:
               275-469
               

               Cow position:
               chrX:14018975-14019172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 69
               

               Conread position:
               275-539
               

               Cow position:
               chrX:5123537-5123270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               69, 253
               

               Conread position:
               275-573
               

               Cow position:
               chrX:22772479-22772781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               81, 69
               

               Conread position:
               276-428
               

               Cow position:
               chrX:2933544-2933698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               276-429
               

               Cow position:
               chrX:4869368-4869523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-449
               

               Cow position:
               chrX:40321686-40321859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 161
               

               Conread position:
               276-450
               

               Cow position:
               chrX:18078085-18077909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-450
               

               Cow position:
               chrX:30143460-30143284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               123
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-456
               

               Cow position:
               chrX:22866756-22866574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-457
               

               Cow position:
               chrX:32583988-32583806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 176
               

               Conread position:
               276-460
               

               Cow position:
               chrX:23386722-23386534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-469
               

               Cow position:
               chrX:47054109-47053914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-506
               

               Cow position:
               chrX:23571975-23571739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-507
               

               Cow position:
               chrX:23122210-23122443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               58, 163
               

               Conread position:
               276-510
               

               Cow position:
               chrX:26275964-26276200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 180
               

               Conread position:
               276-510
               

               Cow position:
               chrX:43979443-43979681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 203
               

               Conread position:
               276-515
               

               Cow position:
               chrX:6373006-6373239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               68, 48
               

               Conread position:
               276-515
               

               Cow position:
               chrX:37816413-37816655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 154
               

               Conread position:
               276-516
               

               Cow position:
               chrX:323723-323964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               276-518
               

               Cow position:
               chrX:20320943-20320698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-518
               

               Cow position:
               chrX:23024528-23024775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 74
               

               Conread position:
               276-532
               

               Cow position:
               chrX:13971402-13971143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               72, 252
               

               Conread position:
               276-539
               

               Cow position:
               chrX:14598670-14598936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-539
               

               Cow position:
               chrX:15575360-15575626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 176
               

               Conread position:
               276-539
               

               Cow position:
               chrX:15576369-15576635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 176
               

               Conread position:
               276-539
               

               Cow position:
               chrX:36373385-36373651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               168
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               276-540
               

               Cow position:
               chrX:26709429-26709699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               68, 170
               

               Conread position:
               276-541
               

               Cow position:
               chrX:14121927-14121659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               67, 252
               

               Conread position:
               276-544
               

               Cow position:
               chrX:18118647-18118376 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 68
               

               Conread position:
               276-544
               

               Cow position:
               chrX:23264612-23264341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chrX:2425297-2425025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chrX:5376194-5376467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               67, 209
               

               Conread position:
               276-545
               

               Cow position:
               chrX:6655442-6655170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-545
               

               Cow position:
               chrX:17055394-17055666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-545
               

               Cow position:
               chrX:18194738-18195008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               67, 36
               

               Conread position:
               276-545
               

               Cow position:
               chrX:21686439-21686711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-545
               

               Cow position:
               chrX:22493832-22494104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 190
               

               Conread position:
               276-545
               

               Cow position:
               chrX:22538129-22537851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               276-545
               

               Cow position:
               chrX:23396423-23396695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chrX:24587629-24587357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chrX:25568575-25568297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               276-545
               

               Cow position:
               chrX:27106083-27106352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               68, 194
               

               Conread position:
               276-545
               

               Cow position:
               chrX:30134348-30134079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               68, 11
               

               Conread position:
               276-545
               

               Cow position:
               chrX:32094625-32094353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               67, 208
               

               Conread position:
               276-545
               

               Cow position:
               chrX:35240689-35240958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               89, 66
               

               Conread position:
               276-545
               

               Cow position:
               chrX:35533676-35533948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-545
               

               Cow position:
               chrX:40544783-40544511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               276-545
               

               Cow position:
               chrX:41271834-41271563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               276-545
               

               Cow position:
               chrX:42460005-42460278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               68, 182
               

               Conread position:
               276-546
               

               Cow position:
               chrX:15577816-15577543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-563
               

               Cow position:
               chrX:2160590-2160881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               67, 252
               

               Conread position:
               276-563
               

               Cow position:
               chrX:4343574-4343865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-563
               

               Cow position:
               chrX:9572348-9572639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-563
               

               Cow position:
               chrX:9976261-9976552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-563
               

               Cow position:
               chrX:10428364-10428655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 252
               

               Conread position:
               276-563
               

               Cow position:
               chrX:11498800-11498509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 252
               

               Conread position:
               276-563
               

               Cow position:
               chrX:14463138-14463429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               276-563
               

               Cow position:
               chrX:45904003-45904294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               276-570
               

               Cow position:
               chrX:27145447-27145722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 47
               

               Conread position:
               276-573
               

               Cow position:
               chrX:35258907-35258610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               68, 133
               

               Conread position:
               276-573
               

               Cow position:
               chrX:35612720-35612419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 68
               

               Conread position:
               276-583
               

               Cow position:
               chrX:19196693-19196381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 252
               

               Conread position:
               277-513
               

               Cow position:
               chrX:46146735-46146500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               115, 43
               

               Conread position:
               277-516
               

               Cow position:
               chrX:9096492-9096732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               88, 191
               

               Conread position:
               277-545
               

               Cow position:
               chrX:14163017-14163301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               278-560
               

               Cow position:
               chrX:22387421-22387142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               28, 162
               

               Conread position:
               279-474
               

               Cow position:
               chrX:16289734-16289536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               279-571
               

               Cow position:
               chrX:46433310-46433609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               64, 187
               

               Conread position:
               286-452
               

               Cow position:
               chrX:14003810-14003640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               286-461
               

               Cow position:
               chrX:25458802-25458626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 171
               

               Conread position:
               286-542
               

               Cow position:
               chrX:10128839-10129098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               286-544
               

               Cow position:
               chrX:14955933-14955677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               72, 13
               

               Conread position:
               286-548
               

               Cow position:
               chrX:22921148-22921417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               58, 14
               

               Conread position:
               286-549
               

               Cow position:
               chrX:48385529-48385267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               57, 152
               

               Conread position:
               286-565
               

               Cow position:
               chrX:30263087-30263371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               79, 29
               

               Conread position:
               286-570
               

               Cow position:
               chrX:34792476-34792194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 159
               

               Conread position:
               287-560
               

               Cow position:
               chrX:47873506-47873228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               82, 173
               

               Conread position:
               288-554
               

               Cow position:
               chrX:35885893-35885625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               81, 27
               

               Conread position:
               288-560
               

               Cow position:
               chrX:30133492-30133210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               288-570
               

               Cow position:
               chrX:27206636-27206918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               55, 19
               

               Conread position:
               289-545
               

               Cow position:
               chrX:44192615-44192351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               177
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               73, 51
               

               Conread position:
               290-570
               

               Cow position:
               chrX:20584157-20584446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               293-542
               

               Cow position:
               chrX:12405550-12405291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 133
               

               Conread position:
               293-557
               

               Cow position:
               chrX:31252256-31252512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               202
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               50, 161
               

               Conread position:
               294-511
               

               Cow position:
               chrX:18515243-18515463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               59, 50
               

               Conread position:
               294-572
               

               Cow position:
               chrX:27227966-27228246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               49, 28
               

               Conread position:
               295-520
               

               Cow position:
               chrX:35822184-35822412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               49, 7
               

               Conread position:
               295-545
               

               Cow position:
               chrX:8917236-8917487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               49, 149
               

               Conread position:
               295-545
               

               Cow position:
               chrX:15231814-15231567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               70, 46
               

               Conread position:
               295-546
               

               Cow position:
               chrX:25208003-25207761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               48, 136
               

               Conread position:
               297-511
               

               Cow position:
               chrX:7053890-7053673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               47, 160
               

               Conread position:
               302-469
               

               Cow position:
               chrX:1946865-1946695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               302-569
               

               Cow position:
               chrX:21986446-21986174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               199
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               10, 191
               

               Conread position:
               303-557
               

               Cow position:
               chrX:39415518-39415265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               40, 31
               

               Conread position:
               303-570
               

               Cow position:
               chrX:5118654-5118380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 118
               

               Conread position:
               303-572
               

               Cow position:
               chrX:27301717-27301995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               28, 155
               

               Conread position:
               307-429
               

               Cow position:
               chrX:10366374-10366251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               307-563
               

               Cow position:
               chrX:34505195-34504937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 94
               

               Conread position:
               307-569
               

               Cow position:
               chrX:23561728-23561974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 62
               

               Conread position:
               311-537
               

               Cow position:
               chrX:29723597-29723825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               311-546
               

               Cow position:
               chrX:42873249-42873476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               32, 5
               

               Conread position:
               311-547
               

               Cow position:
               chrX:5919352-5919587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               30, 91
               

               Conread position:
               311-553
               

               Cow position:
               chrX:11085201-11084963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               32, 141
               

               Conread position:
               311-570
               

               Cow position:
               chrX:34313889-34314142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 31
               

               Conread position:
               311-572
               

               Cow position:
               chrX:20677227-20677485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 41
               

               Conread position:
               312-570
               

               Cow position:
               chrX:19273867-19273589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               314-560
               

               Cow position:
               chrX:21566261-21566515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               314-570
               

               Cow position:
               chrX:9365815-9365558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               29, 14
               

               Conread position:
               315-547
               

               Cow position:
               chrX:27685107-27685344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               28, 139
               

               Conread position:
               317-552
               

               Cow position:
               chrX:5679701-5679472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               57, 20
               

               Conread position:
               318-560
               

               Cow position:
               chrX:616399-616151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 143
               

               Conread position:
               318-560
               

               Cow position:
               chrX:41027020-41027267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               25, 51
               

               Conread position:
               319-560
               

               Cow position:
               chrX:31729307-31729550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 55
               

               Conread position:
               320-545
               

               Cow position:
               chrX:15814952-15815177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               25, 82
               

               Conread position:
               320-567
               

               Cow position:
               chrX:7710678-7710425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               23, 144
               

               Conread position:
               320-570
               

               Cow position:
               chrX:37986098-37986343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               23, 71
               

               Conread position:
               320-570
               

               Cow position:
               chrX:41870938-41871185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               23, 79
               

               Conread position:
               321-570
               

               Cow position:
               chrX:12437385-12437154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               131, 48
               

               Conread position:
               321-570
               

               Cow position:
               chrX:34315396-34315639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               138, 15
               

               Conread position:
               322-557
               

               Cow position:
               chrX:7695615-7695854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               21, 141
               

               Conread position:
               323-570
               

               Cow position:
               chrX:40685463-40685210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               324-545
               

               Cow position:
               chrX:31294688-31294479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 49
               

               Conread position:
               324-570
               

               Cow position:
               chrX:45976789-45977044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               325-545
               

               Cow position:
               chrX:45875261-45875485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               325-548
               

               Cow position:
               chrX:40826883-40826655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               27, 15
               

               Conread position:
               325-559
               

               Cow position:
               chrX:43115021-43115257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               18, 186
               

               Conread position:
               326-554
               

               Cow position:
               chrX:38728608-38728836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               17, 152
               

               Conread position:
               328-570
               

               Cow position:
               chrX:45670101-45670340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               107, 41
               

               Conread position:
               330-519
               

               Cow position:
               chrX:19003175-19003363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               13, 101
               

               Conread position:
               331-554
               

               Cow position:
               chrX:27946183-27945952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               333-562
               

               Cow position:
               chrX:40320283-40320516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               339-570
               

               Cow position:
               chrX:11851784-11851561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               11, 15
               

               Conread position:
               339-570
               

               Cow position:
               chrX:42927934-42927706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               180
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               107, 93
               

               Conread position:
               341-570
               

               Cow position:
               chrX:34837168-34836946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               342-516
               

               Cow position:
               chrX:38654542-38654366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               131
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               88, 49
               

               Conread position:
               342-545
               

               Cow position:
               chrX:27119587-27119790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               23, 64
               

               Conread position:
               342-554
               

               Cow position:
               chrX:24331666-24331878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               33, 114
               

               Conread position:
               342-559
               

               Cow position:
               chrX:33539053-33539277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 112
               

               Conread position:
               342-570
               

               Cow position:
               chrX:26881680-26881447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               343-546
               

               Cow position:
               chrX:43567811-43568013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               87, 101
               

               Conread position:
               343-546
               

               Cow position:
               chrX:46291028-46291231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               111, 9
               

               Conread position:
               343-553
               

               Cow position:
               chrX:17949601-17949391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               26, 117
               

               Conread position:
               345-570
               

               Cow position:
               chrX:29229901-29230117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               350-545
               

               Cow position:
               chrX:36311474-36311663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               139
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               15, 76
               

               Conread position:
               350-554
               

               Cow position:
               chrX:169644-169444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               14, 41
               

               Conread position:
               355-560
               

               Cow position:
               chrX:10516157-10516361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               74, 35
               

               Conread position:
               360-563
               

               Cow position:
               chrX:47345240-47345438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               362-570
               

               Cow position:
               chrX:1466069-1466280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               168
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               362-570
               

               Cow position:
               chrX:45648781-45649000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 44
               

               Conread position:
               363-570
               

               Cow position:
               chrX:918818-918598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 176
               

               Conread position:
               363-570
               

               Cow position:
               chrX:29050156-29050365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               166
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               67, 150
               

               Conread position:
               364-554
               

               Cow position:
               chrX:42855365-42855560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               66, 52
               

               Conread position:
               367-554
               

               Cow position:
               chrX:11318054-11317866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               63, 78
               

               Conread position:
               372-543
               

               Cow position:
               chrX:5135607-5135432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               124
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               373-563
               

               Cow position:
               chrX:18273139-18272947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 149
               

               Conread position:
               374-560
               

               Cow position:
               chrX:36514974-36514784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               134
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               51, 82
               

               Conread position:
               375-573
               

               Cow position:
               chrX:22115396-22115196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               13, 77
               

               Conread position:
               376-563
               

               Cow position:
               chrX:4153113-4152920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               390-570
               

               Cow position:
               chrX:12082389-12082206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               44, 128
               

               Conread position:
               392-570
               

               Cow position:
               chrX:20957186-20957356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               393-557
               

               Cow position:
               chrX:41111660-41111821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               398-570
               

               Cow position:
               chrX:19469562-19469388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               401-558
               

               Cow position:
               chrX:46429873-46429713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               31, 9
               

               Conread position:
               401-568
               

               Cow position:
               chrX:35985765-35985934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               31, 96
               

               Conread position:
               405-570
               

               Cow position:
               chrX:22393035-22392866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               406-547
               

               Cow position:
               chrX:44095209-44095355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               409-570
               

               Cow position:
               chrX:27306407-27306572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               410-569
               

               Cow position:
               chrX:6599828-6599665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               20, 51
               

               Conread position:
               411-558
               

               Cow position:
               chrX:11326143-11325991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               413-573
               

               Cow position:
               chrX:19394511-19394674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               414-558
               

               Cow position:
               chrX:40532084-40531937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 43
               

               Conread position:
               447-570
               

               Cow position:
               chrX:2935952-2936075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.
Conread position:	8-253
Cow position:	chrX:13086007-13085751 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	171
Alignm E-value:	9e-22
Alignm gaps (pig, cow):	8, 0
Conread position:	12-287
Cow position:	chrX:16224003-16223730 (view UCSC Genome Browser custom track)
Alignm length:	282
Alignm identity:	187
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	16, 5
Conread position:	195-570
Cow position:	chrX:41192425-41192822 (view UCSC Genome Browser custom track)
Alignm length:	400
Alignm identity:	265
Alignm E-value:	4e-35
Alignm gaps (pig, cow):	70, 117
Conread position:	204-543
Cow position:	chrX:158025-157686 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	226
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	62, 23
Conread position:	204-560
Cow position:	chrX:7277670-7278019 (view UCSC Genome Browser custom track)
Alignm length:	362
Alignm identity:	233
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	10, 34
Conread position:	206-568
Cow position:	chrX:38852953-38853313 (view UCSC Genome Browser custom track)
Alignm length:	367
Alignm identity:	273
Alignm E-value:	0
Alignm gaps (pig, cow):	137, 10
Conread position:	207-554
Cow position:	chrX:29680501-29680159 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	253
Alignm E-value:	9.80909e-45
Alignm gaps (pig, cow):	46, 14
Conread position:	207-560
Cow position:	chrX:14973985-14973638 (view UCSC Genome Browser custom track)
Alignm length:	367
Alignm identity:	247
Alignm E-value:	5e-28
Alignm gaps (pig, cow):	38, 105
Conread position:	229-557
Cow position:	chrX:44396786-44397114 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	232
Alignm E-value:	5e-37
Alignm gaps (pig, cow):	7, 101
Conread position:	235-557
Cow position:	chrX:39126112-39126431 (view UCSC Genome Browser custom track)
Alignm length:	332
Alignm identity:	226
Alignm E-value:	9e-33
Alignm gaps (pig, cow):	13, 82
Conread position:	237-428
Cow position:	chrX:45658288-45658106 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	143
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	18, 6
Conread position:	237-554
Cow position:	chrX:16996291-16996594 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	220
Alignm E-value:	2e-29
Alignm gaps (pig, cow):	21, 82
Conread position:	241-545
Cow position:	chrX:34543575-34543877 (view UCSC Genome Browser custom track)
Alignm length:	314
Alignm identity:	224
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	24, 14
Conread position:	241-570
Cow position:	chrX:24424600-24424283 (view UCSC Genome Browser custom track)
Alignm length:	333
Alignm identity:	241
Alignm E-value:	0
Alignm gaps (pig, cow):	23, 14
Conread position:	242-427
Cow position:	chrX:46430070-46429887 (view UCSC Genome Browser custom track)
Alignm length:	190
Alignm identity:	150
Alignm E-value:	1e-36
Alignm gaps (pig, cow):	24, 79
Conread position:	243-554
Cow position:	chrX:38935071-38935381 (view UCSC Genome Browser custom track)
Alignm length:	321
Alignm identity:	218
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	12, 151
Conread position:	243-560
Cow position:	chrX:11073401-11073083 (view UCSC Genome Browser custom track)
Alignm length:	327
Alignm identity:	237
Alignm E-value:	0
Alignm gaps (pig, cow):	13, 73
Conread position:	243-568
Cow position:	chrX:9201337-9201664 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	242
Alignm E-value:	0
Alignm gaps (pig, cow):	15, 0
Conread position:	244-470
Cow position:	chrX:4942960-4942744 (view UCSC Genome Browser custom track)
Alignm length:	231
Alignm identity:	168
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	21, 65
Conread position:	244-472
Cow position:	chrX:14924790-14925021 (view UCSC Genome Browser custom track)
Alignm length:	237
Alignm identity:	170
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	21, 30