Cow genome map
| Conread name: | rplac_8678.y1 |
| Conread position: | 83-425 |
| Cow position: | chr13:56292136-56291790 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 74 |
| Conread position: | 105-476 |
| Cow position: | chr13:39983984-39984358 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 27, 37 |
| Conread position: | 105-496 |
| Cow position: | chr13:39984404-39984797 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 89, 138 |
| Conread position: | 129-477 |
| Cow position: | chr13:39984344-39984695 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 68, 106 |
| Conread position: | 166-433 |
| Cow position: | chr13:39984633-39984903 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 31, 77 |
| Conread position: | 210-464 |
| Cow position: | chr13:39930924-39931176 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 210-476 |
| Cow position: | chr13:39984260-39984526 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 21, 30 |
| Conread position: | 210-495 |
| Cow position: | chr13:39930672-39930959 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 269, 0 |
| Conread position: | 221-492 |
| Cow position: | chr13:39930851-39931122 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 221-495 |
| Cow position: | chr13:39930767-39931043 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 258, 0 |
| Conread position: | 239-475 |
| Cow position: | chr13:56292145-56291909 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 239-476 |
| Cow position: | chr13:39984368-39984610 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 17, 85 |
| Conread position: | 240-476 |
| Cow position: | chr13:39983870-39984106 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 155 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 247-476 |
| Cow position: | chr13:39984633-39984862 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 130, 124 |
| Conread position: | 247-510 |
| Cow position: | chr13:56333609-56333873 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 68, 86 |
| Conread position: | 257-476 |
| Cow position: | chr13:39984223-39984442 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 136, 127 |
| Conread position: | 263-495 |
| Cow position: | chr13:39930641-39930875 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 215, 0 |
| Conread position: | 269-476 |
| Cow position: | chr13:39983983-39984190 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-492 |
| Cow position: | chr13:56292031-56291807 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 123, 133 |
Show alignments to all cow chromosomes.