Cow genome map
Conread name: | rplac_8678.y1 |
Conread position: | 55-476 |
Cow position: | chr14:3080136-3079713 (view UCSC Genome Browser custom track) |
Alignm length: | 431 |
Alignm identity: | 267 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 97, 28 |
Conread position: | 78-448 |
Cow position: | chr14:25783487-25783861 (view UCSC Genome Browser custom track) |
Alignm length: | 379 |
Alignm identity: | 240 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 6, 75 |
Conread position: | 83-476 |
Cow position: | chr14:3080613-3080217 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 237 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 120, 0 |
Conread position: | 83-476 |
Cow position: | chr14:25836448-25836844 (view UCSC Genome Browser custom track) |
Alignm length: | 403 |
Alignm identity: | 252 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 82, 70 |
Conread position: | 83-476 |
Cow position: | chr14:25910896-25911292 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 243 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 113, 154 |
Conread position: | 83-477 |
Cow position: | chr14:25783913-25784310 (view UCSC Genome Browser custom track) |
Alignm length: | 400 |
Alignm identity: | 248 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 51, 72 |
Conread position: | 83-487 |
Cow position: | chr14:25783745-25784152 (view UCSC Genome Browser custom track) |
Alignm length: | 409 |
Alignm identity: | 252 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 118, 235 |
Conread position: | 105-474 |
Cow position: | chr14:25784355-25784727 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 235 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 96, 209 |
Conread position: | 105-477 |
Cow position: | chr14:25794675-25794299 (view UCSC Genome Browser custom track) |
Alignm length: | 377 |
Alignm identity: | 225 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 109-487 |
Cow position: | chr14:25784107-25784488 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 244 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 89, 133 |
Conread position: | 110-475 |
Cow position: | chr14:3127678-3127310 (view UCSC Genome Browser custom track) |
Alignm length: | 372 |
Alignm identity: | 228 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 23, 32 |
Conread position: | 122-497 |
Cow position: | chr14:447693-448070 (view UCSC Genome Browser custom track) |
Alignm length: | 384 |
Alignm identity: | 238 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 45, 32 |
Conread position: | 123-482 |
Cow position: | chr14:25876676-25877038 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 225 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 11, 19 |
Conread position: | 126-495 |
Cow position: | chr14:25859544-25859916 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 224 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 71, 293 |
Conread position: | 129-496 |
Cow position: | chr14:25876598-25876968 (view UCSC Genome Browser custom track) |
Alignm length: | 373 |
Alignm identity: | 230 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 68, 103 |
Conread position: | 155-474 |
Cow position: | chr14:3080458-3080135 (view UCSC Genome Browser custom track) |
Alignm length: | 325 |
Alignm identity: | 201 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 13, 124 |
Conread position: | 155-488 |
Cow position: | chr14:3156119-3156455 (view UCSC Genome Browser custom track) |
Alignm length: | 339 |
Alignm identity: | 218 |
Alignm E-value: | 7e-31 |
Alignm gaps (pig, cow): | 42, 79 |
Conread position: | 173-476 |
Cow position: | chr14:25783499-25783805 (view UCSC Genome Browser custom track) |
Alignm length: | 309 |
Alignm identity: | 208 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 25, 62 |
Conread position: | 199-475 |
Cow position: | chr14:25794998-25794722 (view UCSC Genome Browser custom track) |
Alignm length: | 278 |
Alignm identity: | 176 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 43, 49 |
Conread position: | 199-476 |
Cow position: | chr14:447689-447966 (view UCSC Genome Browser custom track) |
Alignm length: | 279 |
Alignm identity: | 180 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 119, 131 |
Conread position: | 200-476 |
Cow position: | chr14:3128089-3127813 (view UCSC Genome Browser custom track) |
Alignm length: | 280 |
Alignm identity: | 183 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 40, 31 |
Conread position: | 200-497 |
Cow position: | chr14:25877428-25877725 (view UCSC Genome Browser custom track) |
Alignm length: | 301 |
Alignm identity: | 199 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 76, 29 |
Conread position: | 213-510 |
Cow position: | chr14:3127992-3127693 (view UCSC Genome Browser custom track) |
Alignm length: | 302 |
Alignm identity: | 193 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 79, 74 |
Conread position: | 222-474 |
Cow position: | chr14:680765-681018 (view UCSC Genome Browser custom track) |
Alignm length: | 254 |
Alignm identity: | 161 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 231-474 |
Cow position: | chr14:25836262-25836506 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 158 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 12, 180 |
Conread position: | 240-495 |
Cow position: | chr14:25836524-25836779 (view UCSC Genome Browser custom track) |
Alignm length: | 257 |
Alignm identity: | 162 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 70, 90 |
Conread position: | 247-474 |
Cow position: | chr14:25783408-25783635 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 152 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 77, 68 |
Conread position: | 247-480 |
Cow position: | chr14:25784332-25784565 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 160 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 76, 50 |
Conread position: | 248-493 |
Cow position: | chr14:25836952-25837197 (view UCSC Genome Browser custom track) |
Alignm length: | 246 |
Alignm identity: | 158 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 253-476 |
Cow position: | chr14:3101182-3100962 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 157 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 63, 76 |
Conread position: | 254-446 |
Cow position: | chr14:25794355-25794162 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 130 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 254-474 |
Cow position: | chr14:25794691-25794471 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 145 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 48, 67 |
Conread position: | 254-476 |
Cow position: | chr14:3127867-3127645 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 149 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 69, 58 |
Conread position: | 254-486 |
Cow position: | chr14:3127699-3127467 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 164 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 254-492 |
Cow position: | chr14:3155564-3155802 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 157 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 144, 148 |
Conread position: | 254-493 |
Cow position: | chr14:3156137-3156376 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 164 |
Alignm E-value: | 8e-33 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 254-496 |
Cow position: | chr14:25876978-25877220 (view UCSC Genome Browser custom track) |
Alignm length: | 247 |
Alignm identity: | 162 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 79, 56 |
Conread position: | 263-475 |
Cow position: | chr14:3100591-3100377 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 147 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 11, 18 |
Conread position: | 263-476 |
Cow position: | chr14:447667-447882 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 151 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 11, 119 |
Conread position: | 263-476 |
Cow position: | chr14:3080012-3079797 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 263-476 |
Cow position: | chr14:3155487-3155702 (view UCSC Genome Browser custom track) |
Alignm length: | 216 |
Alignm identity: | 150 |
Alignm E-value: | 5e-29 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 263-482 |
Cow position: | chr14:3080180-3079959 (view UCSC Genome Browser custom track) |
Alignm length: | 222 |
Alignm identity: | 147 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 263-482 |
Cow position: | chr14:3156060-3156281 (view UCSC Genome Browser custom track) |
Alignm length: | 223 |
Alignm identity: | 159 |
Alignm E-value: | 2e-32 |
Alignm gaps (pig, cow): | 14, 54 |
Conread position: | 263-495 |
Cow position: | chr14:3101258-3101022 (view UCSC Genome Browser custom track) |
Alignm length: | 238 |
Alignm identity: | 161 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 11, 194 |
Conread position: | 263-498 |
Cow position: | chr14:25860438-25860675 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 164 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 13, 123 |
Conread position: | 268-474 |
Cow position: | chr14:680896-681102 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 142 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 149, 145 |
Conread position: | 268-476 |
Cow position: | chr14:680980-681188 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 147 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 38, 54 |
Conread position: | 268-476 |
Cow position: | chr14:3080089-3079881 (view UCSC Genome Browser custom track) |
Alignm length: | 209 |
Alignm identity: | 145 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 268-476 |
Cow position: | chr14:3127771-3127561 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 145 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 268-492 |
Cow position: | chr14:3080257-3080033 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 149 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 65, 59 |
Conread position: | 269-474 |
Cow position: | chr14:3155411-3155616 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 145 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 48, 53 |
Conread position: | 269-474 |
Cow position: | chr14:3155900-3156105 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 142 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 54, 46 |
Conread position: | 269-474 |
Cow position: | chr14:3155984-3156189 (view UCSC Genome Browser custom track) |
Alignm length: | 207 |
Alignm identity: | 144 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 49, 64 |
Conread position: | 269-476 |
Cow position: | chr14:447927-448134 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 143 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 269-476 |
Cow position: | chr14:3101417-3101211 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 138 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 269-476 |
Cow position: | chr14:3127600-3127393 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 148 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 54, 48 |
Conread position: | 269-487 |
Cow position: | chr14:3080760-3080542 (view UCSC Genome Browser custom track) |
Alignm length: | 220 |
Alignm identity: | 146 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 148, 143 |
Conread position: | 276-493 |
Cow position: | chr14:680736-680953 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 145 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 113, 109 |
Show alignments to all cow chromosomes.