Cow genome map

Conread name: rplac_8678.y1

Conread position: 55-476
Cow position: chr14:3080136-3079713 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 267
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 97, 28

Conread position: 78-448
Cow position: chr14:25783487-25783861 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 240
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 6, 75

Conread position: 83-476
Cow position: chr14:3080613-3080217 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 237
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 120, 0

Conread position: 83-476
Cow position: chr14:25836448-25836844 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 252
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 70

Conread position: 83-476
Cow position: chr14:25910896-25911292 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 243
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 154

Conread position: 83-477
Cow position: chr14:25783913-25784310 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 248
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 51, 72

Conread position: 83-487
Cow position: chr14:25783745-25784152 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 252
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 118, 235

Conread position: 105-474
Cow position: chr14:25784355-25784727 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 235
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 96, 209

Conread position: 105-477
Cow position: chr14:25794675-25794299 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 225
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 109-487
Cow position: chr14:25784107-25784488 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 244
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 89, 133

Conread position: 110-475
Cow position: chr14:3127678-3127310 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 228
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 32

Conread position: 122-497
Cow position: chr14:447693-448070 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 238
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 32

Conread position: 123-482
Cow position: chr14:25876676-25877038 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 225
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 19

Conread position: 126-495
Cow position: chr14:25859544-25859916 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 224
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 293

Conread position: 129-496
Cow position: chr14:25876598-25876968 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 230
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 68, 103

Conread position: 155-474
Cow position: chr14:3080458-3080135 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 201
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 13, 124

Conread position: 155-488
Cow position: chr14:3156119-3156455 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 218
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 42, 79

Conread position: 173-476
Cow position: chr14:25783499-25783805 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 208
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 25, 62

Conread position: 199-475
Cow position: chr14:25794998-25794722 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 176
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 43, 49

Conread position: 199-476
Cow position: chr14:447689-447966 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 180
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 119, 131

Conread position: 200-476
Cow position: chr14:3128089-3127813 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 183
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 31

Conread position: 200-497
Cow position: chr14:25877428-25877725 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 199
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 29

Conread position: 213-510
Cow position: chr14:3127992-3127693 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 193
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 79, 74

Conread position: 222-474
Cow position: chr14:680765-681018 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 231-474
Cow position: chr14:25836262-25836506 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 180

Conread position: 240-495
Cow position: chr14:25836524-25836779 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 162
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 70, 90

Conread position: 247-474
Cow position: chr14:25783408-25783635 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 152
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 77, 68

Conread position: 247-480
Cow position: chr14:25784332-25784565 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 76, 50

Conread position: 248-493
Cow position: chr14:25836952-25837197 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 158
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 253-476
Cow position: chr14:3101182-3100962 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 63, 76

Conread position: 254-446
Cow position: chr14:25794355-25794162 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 254-474
Cow position: chr14:25794691-25794471 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 145
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 48, 67

Conread position: 254-476
Cow position: chr14:3127867-3127645 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 149
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 69, 58

Conread position: 254-486
Cow position: chr14:3127699-3127467 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 254-492
Cow position: chr14:3155564-3155802 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 157
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 144, 148

Conread position: 254-493
Cow position: chr14:3156137-3156376 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 164
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 254-496
Cow position: chr14:25876978-25877220 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 162
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 79, 56

Conread position: 263-475
Cow position: chr14:3100591-3100377 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 11, 18

Conread position: 263-476
Cow position: chr14:447667-447882 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 119

Conread position: 263-476
Cow position: chr14:3080012-3079797 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 263-476
Cow position: chr14:3155487-3155702 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 263-482
Cow position: chr14:3080180-3079959 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 263-482
Cow position: chr14:3156060-3156281 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 54

Conread position: 263-495
Cow position: chr14:3101258-3101022 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 161
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 11, 194

Conread position: 263-498
Cow position: chr14:25860438-25860675 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 13, 123

Conread position: 268-474
Cow position: chr14:680896-681102 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 149, 145

Conread position: 268-476
Cow position: chr14:680980-681188 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 38, 54

Conread position: 268-476
Cow position: chr14:3080089-3079881 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 145
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 268-476
Cow position: chr14:3127771-3127561 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 268-492
Cow position: chr14:3080257-3080033 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 149
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 65, 59

Conread position: 269-474
Cow position: chr14:3155411-3155616 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 145
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 48, 53

Conread position: 269-474
Cow position: chr14:3155900-3156105 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 54, 46

Conread position: 269-474
Cow position: chr14:3155984-3156189 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 49, 64

Conread position: 269-476
Cow position: chr14:447927-448134 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 269-476
Cow position: chr14:3101417-3101211 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 269-476
Cow position: chr14:3127600-3127393 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 54, 48

Conread position: 269-487
Cow position: chr14:3080760-3080542 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 148, 143

Conread position: 276-493
Cow position: chr14:680736-680953 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 113, 109

Show alignments to all cow chromosomes.