Cow genome map
| Conread name: | rplac_8678.y1 |
| Conread position: | 82-482 |
| Cow position: | chr17:22552704-22552301 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 83-475 |
| Cow position: | chr17:22552367-22551972 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 77, 64 |
| Conread position: | 83-476 |
| Cow position: | chr17:22552871-22552475 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 254 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 83-487 |
| Cow position: | chr17:22552115-22551708 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 258 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 103, 57 |
| Conread position: | 83-487 |
| Cow position: | chr17:22553039-22552632 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 263 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 121, 154 |
| Conread position: | 83-488 |
| Cow position: | chr17:22589953-22589545 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 81, 70 |
| Conread position: | 83-494 |
| Cow position: | chr17:22589617-22589203 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 255 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 66, 74 |
| Conread position: | 96-488 |
| Cow position: | chr17:22590192-22589797 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 254 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 105-476 |
| Cow position: | chr17:22452210-22451836 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 92, 129 |
| Conread position: | 105-476 |
| Cow position: | chr17:22473421-22473795 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 239 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 49, 56 |
| Conread position: | 105-480 |
| Cow position: | chr17:22499392-22499014 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 92, 129 |
| Conread position: | 105-510 |
| Cow position: | chr17:22473505-22473915 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 90, 125 |
| Conread position: | 106-471 |
| Cow position: | chr17:22452041-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 91, 128 |
| Conread position: | 106-474 |
| Cow position: | chr17:22589846-22589475 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 28, 68 |
| Conread position: | 106-493 |
| Cow position: | chr17:22452125-22451735 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 91, 126 |
| Conread position: | 109-476 |
| Cow position: | chr17:22452374-22452004 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 237 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 86, 125 |
| Conread position: | 160-482 |
| Cow position: | chr17:22590042-22589719 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 43, 15 |
| Conread position: | 166-476 |
| Cow position: | chr17:22552536-22552223 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 112 |
| Conread position: | 166-493 |
| Cow position: | chr17:22473398-22473728 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 166-500 |
| Cow position: | chr17:22589618-22589282 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 37, 162 |
| Conread position: | 191-487 |
| Cow position: | chr17:22590262-22589966 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 49, 38 |
| Conread position: | 192-479 |
| Cow position: | chr17:22473343-22473630 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 200-468 |
| Cow position: | chr17:22452364-22452096 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 200-486 |
| Cow position: | chr17:22452196-22451910 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 40, 31 |
| Conread position: | 206-475 |
| Cow position: | chr17:22551821-22551552 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 21 |
| Conread position: | 206-492 |
| Cow position: | chr17:22553081-22552795 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 112, 123 |
| Conread position: | 212-493 |
| Cow position: | chr17:22473278-22473560 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 28, 100 |
| Conread position: | 239-446 |
| Cow position: | chr17:22473726-22473934 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 82, 70 |
| Conread position: | 239-487 |
| Cow position: | chr17:22498835-22498587 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 37, 27 |
| Conread position: | 244-475 |
| Cow position: | chr17:22553127-22552896 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 153 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 153, 139 |
| Conread position: | 247-493 |
| Cow position: | chr17:22499163-22498917 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 76, 68 |
| Conread position: | 254-475 |
| Cow position: | chr17:22551857-22551636 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 254-475 |
| Cow position: | chr17:22590283-22590062 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 71 |
| Conread position: | 267-476 |
| Cow position: | chr17:22499395-22499186 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 65, 60 |
| Conread position: | 273-480 |
| Cow position: | chr17:22452375-22452167 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 50, 44 |
| Conread position: | 276-482 |
| Cow position: | chr17:22498882-22498676 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 126, 112 |
| Conread position: | 279-496 |
| Cow position: | chr17:22473262-22473479 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.