Cow genome map


           Conread name:
           rplac_8678.y1
        

               Conread position:
               77-483
               

               Cow position:
               
               

               Alignm length:
               415
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               7, 69
               

               Conread position:
               78-476
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               257
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               6, 68
               

               Conread position:
               83-474
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               118, 151
               

               Conread position:
               83-476
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               114, 89
               

               Conread position:
               83-481
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               83-492
               

               Cow position:
               
               

               Alignm length:
               416
               

               Alignm identity:
               261
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               81, 64
               

               Conread position:
               83-493
               

               Cow position:
               
               

               Alignm length:
               420
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               83-504
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               51, 61
               

               Conread position:
               96-487
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               71, 38
               

               Conread position:
               96-510
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               105, 229
               

               Conread position:
               105-474
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               93, 229
               

               Conread position:
               105-474
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               105-474
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 40
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               232
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               92, 129
               

               Conread position:
               105-476
               

               Cow position:
               
               

               Alignm length:
               376
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               29, 37
               

               Conread position:
               105-477
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               246
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               92, 129
               

               Conread position:
               105-493
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               92, 150
               

               Conread position:
               105-494
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               109-493
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               88, 223
               

               Conread position:
               109-499
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               250
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               25, 33
               

               Conread position:
               109-510
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               261
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               110-476
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               122-474
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               75, 206
               

               Conread position:
               122-476
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 56
               

               Conread position:
               141-487
               

               Cow position:
               
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               11, 25
               

               Conread position:
               158-476
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               9, 246
               

               Conread position:
               159-476
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               39, 154
               

               Conread position:
               162-476
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 109
               

               Conread position:
               165-510
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               232
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               32, 69
               

               Conread position:
               166-474
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               32, 42
               

               Conread position:
               171-476
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               22, 6
               

               Conread position:
               173-510
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 61
               

               Conread position:
               200-476
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               31, 40
               

               Conread position:
               200-493
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               205-480
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               205-493
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               35, 29
               

               Conread position:
               206-476
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 21
               

               Conread position:
               206-482
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               37, 23
               

               Conread position:
               206-494
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 20
               

               Conread position:
               206-497
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               34, 25
               

               Conread position:
               210-479
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               114, 104
               

               Conread position:
               213-476
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               18, 27
               

               Conread position:
               215-491
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               236-476
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               237-478
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               37, 26
               

               Conread position:
               237-482
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               239-474
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               38, 24
               

               Conread position:
               239-499
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               35, 19
               

               Conread position:
               254-474
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-474
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               148, 127
               

               Conread position:
               254-493
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-499
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               91, 81
               

               Conread position:
               254-499
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               239, 0
               

               Conread position:
               256-477
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               260-493
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-476
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               268-492
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               8, 63
               

               Conread position:
               269-475
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               269-476
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               269-494
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               63, 59
               

               Conread position:
               269-510
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               221, 0
               

               Conread position:
               278-476
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-493
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.